File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12687ms, 85.69% of 14805ms total Dropped 742 nodes (cum <= 74.03ms) flat flat% sum% cum cum% 0 0% 0% 14797ms 99.95% __libc_start_call_main 0 0% 0% 14797ms 99.95% __libc_start_main_impl 0 0% 0% 14797ms 99.95% _start 0 0% 0% 14794ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14794ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14794ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14794ms 99.93% main 0 0% 0% 14758ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14758ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14758ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14736ms 99.53% AbstractCardiacProblem::Solve 6ms 0.041% 0.041% 11414ms 77.10% AbstractDynamicLinearPdeSolver::Solve 33ms 0.22% 0.26% 9119ms 61.59% AbstractCardiacTissue::SolveCellSystems 160ms 1.08% 1.34% 5754ms 38.87% AbstractCardiacCell::ComputeExceptVoltage 203ms 1.37% 2.72% 4906ms 33.14% AbstractOneStepIvpOdeSolver::InternalSolve 175ms 1.18% 3.90% 4140ms 27.96% EulerIvpOdeSolver::CalculateNextYValue 886ms 5.98% 9.88% 3905ms 26.38% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1719ms 11.61% 21.49% 3583ms 24.20% __GI___exp 2ms 0.014% 21.51% 3266ms 22.06% MonodomainProblem::WriteOneStep 1ms 0.0068% 21.51% 3108ms 20.99% Hdf5DataWriter::PutVector 1ms 0.0068% 21.52% 3092ms 20.88% H5Dwrite 6ms 0.041% 21.56% 3064ms 20.70% H5D__write 97ms 0.66% 22.22% 2624ms 17.72% AbstractCardiacTissue::UpdateCaches (inline) 786ms 5.31% 27.52% 2488ms 16.81% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.52% 1803ms 12.18% H5D__chunk_collective_write 18ms 0.12% 27.65% 1803ms 12.18% H5F_set_coll_metadata_reads 1639ms 11.07% 38.72% 1778ms 12.01% __ieee754_exp_fma 13ms 0.088% 38.80% 1571ms 10.61% H5FD_s3comms_uriencode 0 0% 38.80% 1570ms 10.60% LinearSystem::Solve 0 0% 38.80% 1426ms 9.63% KSPSolve 3ms 0.02% 38.82% 1426ms 9.63% KSPSolve_Private 5ms 0.034% 38.86% 1410ms 9.52% KSPSolve_CG 1ms 0.0068% 38.87% 1212ms 8.19% H5F_block_write 4ms 0.027% 38.89% 1211ms 8.18% H5PB_write 44ms 0.3% 39.19% 1209ms 8.17% 1ms 0.0068% 39.20% 1207ms 8.15% H5FD_write 0 0% 39.20% 1207ms 8.15% H5F__accum_write 5ms 0.034% 39.23% 1139ms 7.69% H5D__chunk_cacheable 1ms 0.0068% 39.24% 1125ms 7.60% H5D__mpio_select_write 1ms 0.0068% 39.24% 1055ms 7.13% PMPI_File_write_at_all 1023ms 6.91% 46.15% 1026ms 6.93% __GI_pwritev64 400ms 2.70% 48.86% 986ms 6.66% H5S_select_iterate 7ms 0.047% 48.90% 904ms 6.11% std::pow (inline) 96ms 0.65% 49.55% 897ms 6.06% __pow 110ms 0.74% 50.29% 801ms 5.41% __ieee754_pow_fma 0 0% 50.29% 746ms 5.04% PCApply 0 0% 50.29% 739ms 4.99% PCApply_BJacobi_Singleblock 0 0% 50.29% 705ms 4.76% KSPSolve_PREONLY 2ms 0.014% 50.31% 702ms 4.74% MatSolve 0 0% 50.31% 702ms 4.74% PCApply_ICC 687ms 4.64% 54.95% 700ms 4.73% MatSolve_SeqSBAIJ_1_NaturalOrdering 291ms 1.97% 56.91% 696ms 4.70% MonodomainSolver::SetupLinearSystem 70ms 0.47% 57.39% 605ms 4.09% H5D__chunk_set_sizes 3ms 0.02% 57.41% 591ms 3.99% MatMult 587ms 3.96% 61.37% 588ms 3.97% MatMult_SeqAIJ 255ms 1.72% 63.09% 584ms 3.94% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 63.09% 574ms 3.88% KSP_PCApply.lto_priv.7 44ms 0.3% 63.39% 441ms 2.98% H5S_mpio_space_type 363ms 2.45% 65.84% 363ms 2.45% log_inline (inline) 285ms 1.93% 67.77% 291ms 1.97% exp_inline (inline) 130ms 0.88% 68.65% 262ms 1.77% TimeStepper::TimeStepper 1ms 0.0068% 68.65% 236ms 1.59% KSPConvergedDefault 103ms 0.7% 69.35% 228ms 1.54% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 46ms 0.31% 69.66% 204ms 1.38% __GI___libc_malloc 145ms 0.98% 70.64% 188ms 1.27% _int_malloc 13ms 0.088% 70.73% 187ms 1.26% H5VM_chunk_index 185ms 1.25% 71.98% 185ms 1.25% [libchaste_heart.so] 13ms 0.088% 72.06% 182ms 1.23% ompi_datatype_create 109ms 0.74% 72.80% 179ms 1.21% top12 (inline) 6ms 0.041% 72.84% 175ms 1.18% MPI_Type_free 174ms 1.18% 74.02% 174ms 1.18% std::isinf (inline) 0 0% 74.02% 173ms 1.17% KSP_PCApply 9ms 0.061% 74.08% 173ms 1.17% ompi_datatype_destroy 135ms 0.91% 74.99% 162ms 1.09% AbstractOneStepIvpOdeSolver::Solve 161ms 1.09% 76.08% 161ms 1.09% ddot_ 135ms 0.91% 76.99% 158ms 1.07% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0068% 76.99% 156ms 1.05% Hdf5DataWriter::PutUnlimitedVariable 27ms 0.18% 77.18% 156ms 1.05% __GI___libc_free 54ms 0.36% 77.54% 154ms 1.04% ompi_datatype_release_args 8ms 0.054% 77.60% 154ms 1.04% ompi_info_register_framework_params 31ms 0.21% 77.80% 143ms 0.97% AbstractCardiacCell::SetVoltage (partial-inline) 139ms 0.94% 78.74% 139ms 0.94% TimeStepper::CalculateNextTime 44ms 0.3% 79.04% 129ms 0.87% _int_free 18ms 0.12% 79.16% 126ms 0.85% H5S_set_version 107ms 0.72% 79.89% 124ms 0.84% AbstractParameterisedSystem::GetAnyVariable 0 0% 79.89% 121ms 0.82% VecDuplicate 1ms 0.0068% 79.89% 121ms 0.82% VecDuplicate_MPI 113ms 0.76% 80.66% 113ms 0.76% __memcpy_avx_unaligned_erms 66ms 0.45% 81.10% 110ms 0.74% H5S_hyper_add_span_element 48ms 0.32% 81.43% 108ms 0.73% H5VM_array_calc 2ms 0.014% 81.44% 108ms 0.73% VecNorm 108ms 0.73% 82.17% 108ms 0.73% __ieee754_log_fma 0 0% 82.17% 99ms 0.67% VecTDot 1ms 0.0068% 82.17% 98ms 0.66% VecNorm_Seq 0 0% 82.17% 97ms 0.66% VecTDot_Seq 1ms 0.0068% 82.18% 97ms 0.66% VecXDot_Seq_Private.constprop.0 2ms 0.014% 82.20% 96ms 0.65% PMPI_Type_create_resized 93ms 0.63% 82.82% 93ms 0.63% H5VM_chunk_index_scaled 1ms 0.0068% 82.83% 93ms 0.63% ompi_datatype_duplicate 83ms 0.56% 83.39% 92ms 0.62% AbstractParameterisedSystem::SetAnyVariable 47ms 0.32% 83.71% 89ms 0.6% std::__cxx11::basic_string::basic_string 50ms 0.34% 84.05% 88ms 0.59% AbstractCardiacCell::GetVoltage (partial-inline) 87ms 0.59% 84.63% 87ms 0.59% [libm.so.6] 2ms 0.014% 84.65% 87ms 0.59% opal_datatype_create_desc 82ms 0.55% 85.20% 82ms 0.55% H5VM_array_offset_pre 2ms 0.014% 85.21% 82ms 0.55% PMPI_File_set_view 26ms 0.18% 85.39% 82ms 0.55% __libc_calloc 6ms 0.041% 85.43% 78ms 0.53% MPI_Type_contiguous 39ms 0.26% 85.69% 75ms 0.51% H5SL_search