File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 434ms, 87.85% of 494ms total Dropped 242 nodes (cum <= 2.47ms) flat flat% sum% cum cum% 0 0% 0% 485ms 98.18% __libc_start_call_main 0 0% 0% 485ms 98.18% __libc_start_main_impl 0 0% 0% 485ms 98.18% _start 0 0% 0% 482ms 97.57% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 482ms 97.57% CxxTest::TestRunner::runAllTests 0 0% 0% 482ms 97.57% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 482ms 97.57% main 0 0% 0% 435ms 88.06% CxxTest::RealTestDescription::run 0 0% 0% 435ms 88.06% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 435ms 88.06% CxxTest::TestRunner::runTest (inline) 0 0% 0% 435ms 88.06% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 435ms 88.06% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 430ms 87.04% AbstractCardiacProblem::Solve 0 0% 0% 428ms 86.64% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 392ms 79.35% LinearSystem::Solve 0 0% 0% 390ms 78.95% KSPSolve 1ms 0.2% 0.2% 390ms 78.95% KSPSolve_Private 0 0% 0.2% 389ms 78.74% KSPSolve_CG 0 0% 0.2% 220ms 44.53% KSP_PCApply.lto_priv.7 1ms 0.2% 0.4% 215ms 43.52% PCApply 0 0% 0.4% 214ms 43.32% PCApply_BJacobi_Singleblock 0 0% 0.4% 188ms 38.06% KSPSolve_PREONLY (partial-inline) 0 0% 0.4% 171ms 34.62% MatSolve 169ms 34.21% 34.62% 171ms 34.62% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.62% 171ms 34.62% PCApply_ICC 1ms 0.2% 34.82% 90ms 18.22% MatMult 0 0% 34.82% 89ms 18.02% MatMult_SeqAIJ 89ms 18.02% 52.83% 89ms 18.02% MatMult_SeqAIJ_Inode (inline) 59ms 11.94% 64.78% 59ms 11.94% ddot_ 0 0% 64.78% 43ms 8.70% CxxTest::RealWorldDescription::setUp 0 0% 64.78% 43ms 8.70% PMPI_Init_thread 0 0% 64.78% 43ms 8.70% PetscInitialize 0 0% 64.78% 43ms 8.70% PetscSetup::setUpWorld 0 0% 64.78% 43ms 8.70% PetscSetupUtils::CommonSetup 0 0% 64.78% 43ms 8.70% PetscSetupUtils::InitialisePetsc 0 0% 64.78% 43ms 8.70% VecTDot 0 0% 64.78% 43ms 8.70% VecTDot_Seq 0 0% 64.78% 43ms 8.70% VecXDot_Seq_Private.constprop.0 0 0% 64.78% 43ms 8.70% ompi_mpi_init 0 0% 64.78% 37ms 7.49% 1ms 0.2% 64.98% 33ms 6.68% AbstractCardiacTissue::SolveCellSystems 1ms 0.2% 65.18% 28ms 5.67% MatNullSpaceRemove 0 0% 65.18% 25ms 5.06% orte_init 0 0% 65.18% 18ms 3.64% KSP_PCApply (partial-inline) 1ms 0.2% 65.38% 17ms 3.44% VecNorm 10ms 2.02% 67.41% 17ms 3.44% __GI___exp 0 0% 67.41% 17ms 3.44% _dl_init 0 0% 67.41% 17ms 3.44% call_init (inline) 0 0% 67.41% 17ms 3.44% mca_base_framework_open 0 0% 67.41% 16ms 3.24% AbstractCardiacCell::ComputeExceptVoltage 0 0% 67.41% 16ms 3.24% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 67.41% 16ms 3.24% VecNorm_Seq 0 0% 67.41% 16ms 3.24% __GI__dl_catch_exception 0 0% 67.41% 16ms 3.24% _dl_catch_error 0 0% 67.41% 16ms 3.24% _dlerror_run 5ms 1.01% 68.42% 15ms 3.04% CellLuoRudy1991FromCellML::GetIIonic 0 0% 68.42% 15ms 3.04% ___dlopen 0 0% 68.42% 15ms 3.04% _dl_open 0 0% 68.42% 15ms 3.04% dl_open_worker 0 0% 68.42% 15ms 3.04% dlopen_doit 0 0% 68.42% 15ms 3.04% dlopen_implementation (inline) 0 0% 68.42% 15ms 3.04% hwloc_topology_load 0 0% 68.42% 15ms 3.04% mca_base_framework_components_register 0 0% 68.42% 15ms 3.04% mca_base_framework_register 0 0% 68.42% 15ms 3.04% opal_stackframe_output 0 0% 68.42% 14ms 2.83% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.2% 68.62% 14ms 2.83% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 68.62% 14ms 2.83% EulerIvpOdeSolver::CalculateNextYValue 0 0% 68.62% 14ms 2.83% VecMDot 1ms 0.2% 68.83% 14ms 2.83% VecMXDot_Private 0 0% 68.83% 14ms 2.83% hwloc_linux_get_tid_last_cpu_location 0 0% 68.83% 14ms 2.83% mca_base_component_find 0 0% 68.83% 14ms 2.83% mca_base_component_repository_open 0 0% 68.83% 13ms 2.63% VecMAXPY 12ms 2.43% 71.26% 13ms 2.63% VecMAXPY_Seq 12ms 2.43% 73.68% 13ms 2.63% VecMDot_Seq 0 0% 73.68% 10ms 2.02% VecDuplicate 0 0% 73.68% 9ms 1.82% VecAXPY 0 0% 73.68% 9ms 1.82% VecAXPY_Seq 0 0% 73.68% 9ms 1.82% VecAYPX 9ms 1.82% 75.51% 9ms 1.82% VecAYPX_Seq 0 0% 75.51% 9ms 1.82% VecDuplicate_Seq 0 0% 75.51% 9ms 1.82% _dl_lookup_symbol_x 2ms 0.4% 75.91% 9ms 1.82% _dl_runtime_resolve_xsavec 0 0% 75.91% 9ms 1.82% _dl_start_user 9ms 1.82% 77.73% 9ms 1.82% daxpy_ 0 0% 77.73% 9ms 1.82% mca_base_framework_components_open 0 0% 77.73% 9ms 1.82% mca_topo_base_dist_graph_neighbors_count 2ms 0.4% 78.14% 7ms 1.42% _dl_fixup 0 0% 78.14% 7ms 1.42% dl_open_worker_begin 6ms 1.21% 79.35% 7ms 1.42% do_lookup_x 1ms 0.2% 79.55% 6ms 1.21% PetscMallocA 1ms 0.2% 79.76% 6ms 1.21% __GI___libc_malloc 4ms 0.81% 80.57% 6ms 1.21% __ieee754_exp_fma 1ms 0.2% 80.77% 6ms 1.21% __ieee754_pow_fma 0 0% 80.77% 6ms 1.21% __pow 2ms 0.4% 81.17% 6ms 1.21% boost::serialization::singleton::get_instance 0 0% 81.17% 6ms 1.21% std::pow (inline) 0 0% 81.17% 5ms 1.01% PetscHeaderCreate_Private 1ms 0.2% 81.38% 5ms 1.01% PetscMallocAlign (partial-inline) 0 0% 81.38% 5ms 1.01% VecCreate 0 0% 81.38% 5ms 1.01% VecDestroy 5ms 1.01% 82.39% 5ms 1.01% __GI___clock_nanosleep 5ms 1.01% 83.40% 5ms 1.01% __GI___libc_read 0 0% 83.40% 5ms 1.01% __GI___nanosleep 5ms 1.01% 84.41% 5ms 1.01% _int_malloc 5ms 1.01% 85.43% 5ms 1.01% log_inline (inline) 0 0% 85.43% 5ms 1.01% opal_hwloc_base_get_topology 0 0% 85.43% 5ms 1.01% orte_ess_base_proc_binding 0 0% 85.43% 5ms 1.01% usleep 0 0% 85.43% 4ms 0.81% AbstractCardiacProblem::Initialise 0 0% 85.43% 4ms 0.81% PetscMemcpy (inline) 0 0% 85.43% 4ms 0.81% PetscMemzero (inline) 0 0% 85.43% 4ms 0.81% VecSetType 0 0% 85.43% 4ms 0.81% XOpenDisplay 0 0% 85.43% 4ms 0.81% [hwloc_gl.so] 0 0% 85.43% 4ms 0.81% _XConnectXCB 0 0% 85.43% 4ms 0.81% __GI___libc_free 4ms 0.81% 86.23% 4ms 0.81% __memcpy_avx_unaligned_erms 4ms 0.81% 87.04% 4ms 0.81% __memset_avx2_unaligned_erms 0 0% 87.04% 4ms 0.81% _dl_open_relocate_one_object (inline) 0 0% 87.04% 4ms 0.81% _dl_relocate_object 1ms 0.2% 87.25% 4ms 0.81% _int_free 0 0% 87.25% 4ms 0.81% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 87.25% 4ms 0.81% elf_dynamic_do_Rela (inline) 0 0% 87.25% 4ms 0.81% elf_machine_rela (inline) 0 0% 87.25% 4ms 0.81% resolve_map (inline) 0 0% 87.25% 3ms 0.61% BidomainSolver::SetupLinearSystem 0 0% 87.25% 3ms 0.61% CxxTest::RealWorldDescription::tearDown 0 0% 87.25% 3ms 0.61% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 87.25% 3ms 0.61% MPI_Comm_set_attr 0 0% 87.25% 3ms 0.61% PMPI_Comm_get_attr 0 0% 87.25% 3ms 0.61% PetscFinalize 0 0% 87.25% 3ms 0.61% PetscHeaderDestroy_Private 0 0% 87.25% 3ms 0.61% PetscSetup::tearDownWorld 0 0% 87.25% 3ms 0.61% PetscSetupUtils::CommonFinalize 0 0% 87.25% 3ms 0.61% VecCreate_Seq 0 0% 87.25% 3ms 0.61% [libxcb.so.1.1.0] 0 0% 87.25% 3ms 0.61% __GI_exit 1ms 0.2% 87.45% 3ms 0.61% __GI_getaddrinfo 1ms 0.2% 87.65% 3ms 0.61% __cxa_finalize 0 0% 87.65% 3ms 0.61% __run_exit_handlers 0 0% 87.65% 3ms 0.61% _dl_call_fini 0 0% 87.65% 3ms 0.61% _dl_fini 0 0% 87.65% 3ms 0.61% boost::serialization::singleton::get_mutable_instance (inline) 1ms 0.2% 87.85% 3ms 0.61% ompi_attr_get_c 0 0% 87.85% 3ms 0.61% ompi_attr_set_c 0 0% 87.85% 3ms 0.61% ompi_mpi_finalize 0 0% 87.85% 3ms 0.61% xcb_connect_to_display_with_auth_info