File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12758ms, 85.45% of 14930ms total Dropped 764 nodes (cum <= 74.65ms) flat flat% sum% cum cum% 0 0% 0% 14920ms 99.93% __libc_start_call_main 0 0% 0% 14920ms 99.93% __libc_start_main_impl 0 0% 0% 14920ms 99.93% _start 0 0% 0% 14917ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14917ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14917ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14917ms 99.91% main 0 0% 0% 14867ms 99.58% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14867ms 99.58% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14867ms 99.58% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14843ms 99.42% AbstractCardiacProblem::Solve 3ms 0.02% 0.04% 11386ms 76.26% AbstractDynamicLinearPdeSolver::Solve 66ms 0.44% 0.48% 9027ms 60.46% AbstractCardiacTissue::SolveCellSystems 89ms 0.6% 1.08% 5475ms 36.67% AbstractCardiacCell::ComputeExceptVoltage 82ms 0.55% 1.63% 4837ms 32.40% AbstractOneStepIvpOdeSolver::InternalSolve 156ms 1.04% 2.67% 4156ms 27.84% EulerIvpOdeSolver::CalculateNextYValue 926ms 6.20% 8.87% 3964ms 26.55% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1804ms 12.08% 20.96% 3559ms 23.84% __GI___exp 0 0% 20.96% 3386ms 22.68% MonodomainProblem::WriteOneStep 2ms 0.013% 20.97% 3233ms 21.65% H5Dwrite 1ms 0.0067% 20.98% 3233ms 21.65% Hdf5DataWriter::PutVector 4ms 0.027% 21.00% 3208ms 21.49% H5D__write 119ms 0.8% 21.80% 2867ms 19.20% AbstractCardiacTissue::UpdateCaches (inline) 820ms 5.49% 27.29% 2672ms 17.90% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.29% 1919ms 12.85% H5D__chunk_collective_write 19ms 0.13% 27.42% 1919ms 12.85% H5F_set_coll_metadata_reads 13ms 0.087% 27.51% 1717ms 11.50% H5FD_s3comms_uriencode 1355ms 9.08% 36.58% 1687ms 11.30% __ieee754_exp_fma 3ms 0.02% 36.60% 1590ms 10.65% LinearSystem::Solve 0 0% 36.60% 1469ms 9.84% KSPSolve 2ms 0.013% 36.62% 1469ms 9.84% KSPSolve_Private 1ms 0.0067% 36.62% 1458ms 9.77% KSPSolve_CG 56ms 0.38% 37.00% 1360ms 9.11% 6ms 0.04% 37.04% 1352ms 9.06% H5F_block_write 2ms 0.013% 37.05% 1346ms 9.02% H5PB_write 1ms 0.0067% 37.06% 1344ms 9.00% H5FD_write 0 0% 37.06% 1344ms 9.00% H5F__accum_write 0 0% 37.06% 1240ms 8.31% H5D__mpio_select_write 10ms 0.067% 37.13% 1144ms 7.66% H5D__chunk_cacheable 0 0% 37.13% 1127ms 7.55% PMPI_File_write_at_all 1101ms 7.37% 44.50% 1103ms 7.39% __GI_pwritev64 3ms 0.02% 44.52% 1007ms 6.74% std::pow (inline) 86ms 0.58% 45.10% 1004ms 6.72% __pow 324ms 2.17% 47.27% 1001ms 6.70% H5S_select_iterate 93ms 0.62% 47.89% 917ms 6.14% __ieee754_pow_fma 1ms 0.0067% 47.90% 792ms 5.30% PCApply 1ms 0.0067% 47.90% 786ms 5.26% PCApply_BJacobi_Singleblock 1ms 0.0067% 47.91% 765ms 5.12% KSPSolve_PREONLY 6ms 0.04% 47.95% 761ms 5.10% MatSolve 0 0% 47.95% 761ms 5.10% PCApply_ICC 746ms 5.00% 52.95% 755ms 5.06% MatSolve_SeqSBAIJ_1_NaturalOrdering 342ms 2.29% 55.24% 748ms 5.01% MonodomainSolver::SetupLinearSystem 84ms 0.56% 55.80% 692ms 4.63% H5D__chunk_set_sizes 3ms 0.02% 55.82% 608ms 4.07% MatMult 602ms 4.03% 59.85% 605ms 4.05% MatMult_SeqAIJ 0 0% 59.85% 574ms 3.84% KSP_PCApply.lto_priv.7 82ms 0.55% 60.40% 480ms 3.22% H5S_mpio_space_type 445ms 2.98% 63.38% 445ms 2.98% log_inline (inline) 230ms 1.54% 64.92% 439ms 2.94% CellLuoRudy1991FromCellML::VerifyStateVariables 313ms 2.10% 67.02% 329ms 2.20% exp_inline (inline) 148ms 0.99% 68.01% 306ms 2.05% TimeStepper::TimeStepper 232ms 1.55% 69.56% 302ms 2.02% top12 (inline) 2ms 0.013% 69.58% 287ms 1.92% KSPConvergedDefault 246ms 1.65% 71.23% 246ms 1.65% [libchaste_heart.so] 8ms 0.054% 71.28% 221ms 1.48% H5VM_chunk_index 0 0% 71.28% 219ms 1.47% KSP_PCApply 47ms 0.31% 71.59% 195ms 1.31% __GI___libc_malloc 53ms 0.35% 71.95% 183ms 1.23% AbstractCardiacCell::SetVoltage (partial-inline) 183ms 1.23% 73.17% 183ms 1.23% ddot_ 18ms 0.12% 73.30% 181ms 1.21% __GI___libc_free 138ms 0.92% 74.22% 173ms 1.16% _int_malloc 10ms 0.067% 74.29% 172ms 1.15% ompi_datatype_destroy 6ms 0.04% 74.33% 169ms 1.13% MPI_Type_free 166ms 1.11% 75.44% 166ms 1.11% asuint64 (inline) 163ms 1.09% 76.53% 163ms 1.09% TimeStepper::CalculateNextTime 54ms 0.36% 76.89% 162ms 1.09% _int_free 11ms 0.074% 76.97% 157ms 1.05% ompi_datatype_create 0 0% 76.97% 153ms 1.02% Hdf5DataWriter::PutUnlimitedVariable 105ms 0.7% 77.67% 147ms 0.98% AbstractOneStepIvpOdeSolver::Solve 32ms 0.21% 77.88% 144ms 0.96% H5S_set_version 3ms 0.02% 77.90% 143ms 0.96% ompi_info_register_framework_params 29ms 0.19% 78.10% 141ms 0.94% ompi_datatype_release_args 56ms 0.38% 78.47% 140ms 0.94% H5S_hyper_add_span_element 123ms 0.82% 79.30% 137ms 0.92% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 2ms 0.013% 79.31% 129ms 0.86% PMPI_File_set_view 46ms 0.31% 79.62% 122ms 0.82% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 114ms 0.76% 80.38% 114ms 0.76% __ieee754_log_fma 113ms 0.76% 81.14% 113ms 0.76% H5VM_chunk_index_scaled 1ms 0.0067% 81.15% 113ms 0.76% VecTDot 113ms 0.76% 81.90% 113ms 0.76% __memcpy_avx_unaligned_erms 53ms 0.35% 82.26% 112ms 0.75% H5VM_array_calc 98ms 0.66% 82.91% 111ms 0.74% AbstractParameterisedSystem::SetAnyVariable 2ms 0.013% 82.93% 109ms 0.73% VecTDot_Seq 2ms 0.013% 82.94% 107ms 0.72% VecXDot_Seq_Private.constprop.0 76ms 0.51% 83.45% 104ms 0.7% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 83.46% 104ms 0.7% VecNorm 101ms 0.68% 84.13% 101ms 0.68% H5VM_array_offset_pre 0 0% 84.13% 100ms 0.67% VecDuplicate 1ms 0.0067% 84.14% 100ms 0.67% VecDuplicate_MPI 0 0% 84.14% 99ms 0.66% VecNorm_Seq 2ms 0.013% 84.15% 98ms 0.66% ompi_datatype_duplicate 1ms 0.0067% 84.16% 93ms 0.62% PMPI_Type_create_resized 6ms 0.04% 84.20% 90ms 0.6% H5D__chunk_allocated 87ms 0.58% 84.78% 87ms 0.58% std::isinf (inline) 34ms 0.23% 85.01% 86ms 0.58% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0067% 85.02% 84ms 0.56% H5D__contig_fill 0 0% 85.02% 84ms 0.56% H5D__select_write 0 0% 85.02% 84ms 0.56% H5Dgather 0 0% 85.02% 83ms 0.56% H5D__contig_write 0 0% 85.02% 83ms 0.56% H5VM_opvv 14ms 0.094% 85.11% 82ms 0.55% opal_dss_print_buffer_contents 0 0% 85.11% 82ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 85.11% 82ms 0.55% std::vector::assign (inline) 51ms 0.34% 85.45% 81ms 0.54% TimeStepper::AdvanceOneTimeStep