File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109940ms, 91.84% of 119710ms total Dropped 1149 nodes (cum <= 598.55ms) flat flat% sum% cum cum% 0 0% 0% 119691ms 100% __libc_start_call_main 0 0% 0% 119691ms 100% __libc_start_main_impl 0 0% 0% 119691ms 100% _start 0 0% 0% 119689ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119689ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119689ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119689ms 100% main 0 0% 0% 119653ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119653ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119653ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119653ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119653ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 119652ms 100% AbstractConvergenceTester::Converge 2ms 0.0017% 0.0017% 118394ms 98.90% AbstractCardiacProblem::Solve 12ms 0.01% 0.012% 117594ms 98.23% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0075% 0.019% 66034ms 55.16% LinearSystem::Solve 1ms 0.00084% 0.02% 65518ms 54.73% KSPSolve 16ms 0.013% 0.033% 65517ms 54.73% KSPSolve_Private 13ms 0.011% 0.044% 65117ms 54.40% KSPSolve_SYMMLQ 213ms 0.18% 0.22% 42698ms 35.67% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.22% 36616ms 30.59% PCApply 4ms 0.0033% 0.23% 36599ms 30.57% PCApply_BJacobi_Singleblock 1ms 0.00084% 0.23% 34039ms 28.43% KSPSolve_PREONLY (partial-inline) 1349ms 1.13% 1.35% 32919ms 27.50% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0025% 1.36% 32865ms 27.45% PCApply_ICC 9ms 0.0075% 1.36% 32862ms 27.45% MatSolve 32380ms 27.05% 28.41% 32853ms 27.44% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0025% 28.42% 31655ms 26.44% KSP_PCApply.lto_priv.18 7028ms 5.87% 34.29% 28547ms 23.85% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 3ms 0.0025% 34.29% 22571ms 18.85% MatMult 225ms 0.19% 34.48% 22568ms 18.85% MatMult_SeqAIJ (partial-inline) 22070ms 18.44% 52.91% 22567ms 18.85% MatMult_SeqAIJ_Inode (inline) 2000ms 1.67% 54.58% 14645ms 12.23% CardiacNewtonSolver::Solve 270ms 0.23% 54.81% 8913ms 7.45% AbstractCardiacTissue::UpdateCaches (inline) 4362ms 3.64% 58.45% 8488ms 7.09% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2018ms 1.69% 60.14% 8457ms 7.06% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1071ms 0.89% 61.03% 7846ms 6.55% BidomainSolver::SetupLinearSystem 1110ms 0.93% 61.96% 7422ms 6.20% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 3ms 0.0025% 61.96% 7024ms 5.87% KSP_PCApply (partial-inline) 11ms 0.0092% 61.97% 6395ms 5.34% KSPConvergedDefault 6057ms 5.06% 67.03% 6057ms 5.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3824ms 3.19% 70.23% 3863ms 3.23% __ieee754_log_fma 0 0% 70.23% 3731ms 3.12% boost::numeric::ublas::norm_inf (inline) 2495ms 2.08% 72.31% 3731ms 3.12% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.31% 3731ms 3.12% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.31% 3731ms 3.12% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0058% 72.32% 3383ms 2.83% MatNullSpaceRemove 3299ms 2.76% 75.07% 3299ms 2.76% __memcpy_avx_unaligned_erms 0 0% 75.07% 3267ms 2.73% PetscMemcpy (inline) 31ms 0.026% 75.10% 3105ms 2.59% std::pow (inline) 403ms 0.34% 75.44% 3071ms 2.57% __pow 1724ms 1.44% 76.88% 2861ms 2.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 19ms 0.016% 76.89% 2833ms 2.37% VecCopy 2ms 0.0017% 76.89% 2812ms 2.35% VecCopy_Seq (partial-inline) 2760ms 2.31% 79.20% 2760ms 2.31% ddot_ 369ms 0.31% 79.51% 2653ms 2.22% __ieee754_pow_fma 13ms 0.011% 79.52% 2441ms 2.04% VecAXPY 3ms 0.0025% 79.52% 2428ms 2.03% VecAXPY_Seq 2405ms 2.01% 81.53% 2405ms 2.01% daxpy_ 5ms 0.0042% 81.53% 2283ms 1.91% VecDot 0 0% 81.53% 2278ms 1.90% VecDot_Seq 4ms 0.0033% 81.54% 2278ms 1.90% VecXDot_Seq_Private.constprop.0 4ms 0.0033% 81.54% 2065ms 1.73% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.54% 1932ms 1.61% VecMDot 11ms 0.0092% 81.55% 1932ms 1.61% VecMXDot_Private 1913ms 1.60% 83.15% 1918ms 1.60% VecMDot_Seq 26ms 0.022% 83.17% 1702ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1510ms 1.26% 84.43% 1564ms 1.31% exp_inline (inline) 1456ms 1.22% 85.65% 1456ms 1.22% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 7ms 0.0058% 85.65% 1444ms 1.21% VecMAXPY 1426ms 1.19% 86.84% 1437ms 1.20% VecMAXPY_Seq 0 0% 86.84% 1413ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1170ms 0.98% 87.82% 1170ms 0.98% __memset_avx2_unaligned_erms 0 0% 87.82% 1161ms 0.97% PetscMemzero (inline) 0 0% 87.82% 1138ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.82% 1138ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.82% 1138ms 0.95% boost_numeric_ublas_abs (inline) 1138ms 0.95% 88.77% 1138ms 0.95% std::abs (inline) 0 0% 88.77% 1108ms 0.93% CuboidMeshConstructor::Construct 0 0% 88.77% 1107ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0017% 88.77% 1107ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 6ms 0.005% 88.78% 1105ms 0.92% boost::numeric::ublas::matrix_assign (inline) 219ms 0.18% 88.96% 1095ms 0.91% boost::numeric::ublas::indexing_matrix_assign 788ms 0.66% 89.62% 1044ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00084% 89.62% 996ms 0.83% Element::Element 8ms 0.0067% 89.63% 991ms 0.83% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.63% 937ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00084% 89.63% 913ms 0.76% VecDuplicate 8ms 0.0067% 89.64% 862ms 0.72% BidomainAssembler::ComputeMatrixTerm 7ms 0.0058% 89.64% 862ms 0.72% VecScale 5ms 0.0042% 89.65% 855ms 0.71% VecScale_Seq 848ms 0.71% 90.36% 848ms 0.71% dscal_ 843ms 0.7% 91.06% 843ms 0.7% [libchaste_heart.so] 7ms 0.0058% 91.07% 819ms 0.68% boost::numeric::ublas::c_matrix::c_matrix (inline) 14ms 0.012% 91.08% 767ms 0.64% PetscMallocA 5ms 0.0042% 91.08% 753ms 0.63% PetscMallocAlign (partial-inline) 3ms 0.0025% 91.08% 750ms 0.63% VecNorm 0 0% 91.08% 739ms 0.62% VecNorm_Seq 0 0% 91.08% 737ms 0.62% BidomainProblem::WriteOneStep 0 0% 91.08% 706ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 225ms 0.19% 91.27% 702ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 679ms 0.57% 91.84% 679ms 0.57% log_inline (inline) 0 0% 91.84% 652ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)