File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12884ms, 85.96% of 14988ms total Dropped 754 nodes (cum <= 74.94ms) flat flat% sum% cum cum% 0 0% 0% 14981ms 100% __libc_start_call_main 0 0% 0% 14981ms 100% __libc_start_main_impl 0 0% 0% 14981ms 100% _start 0 0% 0% 14979ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14979ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14979ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14979ms 99.94% main 0 0% 0% 14942ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14942ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14942ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14919ms 99.54% AbstractCardiacProblem::Solve 2ms 0.013% 0.033% 11357ms 75.77% AbstractDynamicLinearPdeSolver::Solve 36ms 0.24% 0.27% 9196ms 61.36% AbstractCardiacTissue::SolveCellSystems 171ms 1.14% 1.41% 5745ms 38.33% AbstractCardiacCell::ComputeExceptVoltage 167ms 1.11% 2.53% 4915ms 32.79% AbstractOneStepIvpOdeSolver::InternalSolve 175ms 1.17% 3.70% 4187ms 27.94% EulerIvpOdeSolver::CalculateNextYValue 963ms 6.43% 10.12% 3951ms 26.36% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1742ms 11.62% 21.74% 3589ms 23.95% __GI___exp 0 0% 21.74% 3493ms 23.31% MonodomainProblem::WriteOneStep 0 0% 21.74% 3331ms 22.22% Hdf5DataWriter::PutVector 1ms 0.0067% 21.75% 3290ms 21.95% H5Dwrite 3ms 0.02% 21.77% 3254ms 21.71% H5D__write 73ms 0.49% 22.26% 2580ms 17.21% AbstractCardiacTissue::UpdateCaches (inline) 829ms 5.53% 27.79% 2472ms 16.49% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.80% 1903ms 12.70% H5D__chunk_collective_write 19ms 0.13% 27.93% 1901ms 12.68% H5F_set_coll_metadata_reads 1604ms 10.70% 38.63% 1765ms 11.78% __ieee754_exp_fma 31ms 0.21% 38.84% 1651ms 11.02% H5FD_s3comms_uriencode 0 0% 38.84% 1400ms 9.34% LinearSystem::Solve 2ms 0.013% 38.85% 1261ms 8.41% KSPSolve 3ms 0.02% 38.87% 1259ms 8.40% KSPSolve_Private 2ms 0.013% 38.88% 1242ms 8.29% KSPSolve_CG 13ms 0.087% 38.97% 1234ms 8.23% H5D__chunk_cacheable 1ms 0.0067% 38.98% 1196ms 7.98% H5F_block_write 3ms 0.02% 39.00% 1195ms 7.97% H5PB_write 3ms 0.02% 39.02% 1192ms 7.95% H5FD_write 0 0% 39.02% 1192ms 7.95% H5F__accum_write 47ms 0.31% 39.33% 1188ms 7.93% 0 0% 39.33% 1094ms 7.30% H5D__mpio_select_write 400ms 2.67% 42.00% 1064ms 7.10% H5S_select_iterate 0 0% 42.00% 1002ms 6.69% PMPI_File_write_at_all 967ms 6.45% 48.45% 972ms 6.49% __GI_pwritev64 9ms 0.06% 48.51% 815ms 5.44% std::pow (inline) 80ms 0.53% 49.05% 806ms 5.38% __pow 327ms 2.18% 51.23% 740ms 4.94% MonodomainSolver::SetupLinearSystem 96ms 0.64% 51.87% 724ms 4.83% __ieee754_pow_fma 62ms 0.41% 52.28% 677ms 4.52% H5D__chunk_set_sizes 311ms 2.07% 54.36% 669ms 4.46% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 54.36% 645ms 4.30% PCApply 0 0% 54.36% 641ms 4.28% PCApply_BJacobi_Singleblock 0 0% 54.36% 614ms 4.10% KSPSolve_PREONLY 1ms 0.0067% 54.36% 610ms 4.07% PCApply_ICC 0 0% 54.36% 609ms 4.06% MatSolve 600ms 4.00% 58.37% 609ms 4.06% MatSolve_SeqSBAIJ_1_NaturalOrdering 2ms 0.013% 58.38% 601ms 4.01% MatMult 597ms 3.98% 62.36% 599ms 4.00% MatMult_SeqAIJ 57ms 0.38% 62.74% 554ms 3.70% H5S_mpio_space_type 0 0% 62.74% 445ms 2.97% KSP_PCApply.lto_priv.7 333ms 2.22% 64.97% 333ms 2.22% log_inline (inline) 5ms 0.033% 65.00% 264ms 1.76% KSPConvergedDefault 264ms 1.76% 66.76% 264ms 1.76% exp_inline (inline) 50ms 0.33% 67.09% 231ms 1.54% __GI___libc_malloc 122ms 0.81% 67.91% 227ms 1.51% TimeStepper::TimeStepper 179ms 1.19% 69.10% 216ms 1.44% _int_malloc 23ms 0.15% 69.26% 205ms 1.37% H5VM_chunk_index 0 0% 69.26% 201ms 1.34% KSP_PCApply 52ms 0.35% 69.60% 193ms 1.29% AbstractCardiacCell::SetVoltage (partial-inline) 8ms 0.053% 69.66% 190ms 1.27% MPI_Type_free 102ms 0.68% 70.34% 190ms 1.27% top12 (inline) 7ms 0.047% 70.38% 188ms 1.25% ompi_datatype_destroy 6ms 0.04% 70.42% 184ms 1.23% ompi_datatype_create 178ms 1.19% 71.61% 178ms 1.19% [libchaste_heart.so] 96ms 0.64% 72.25% 173ms 1.15% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 138ms 0.92% 73.17% 170ms 1.13% AbstractOneStepIvpOdeSolver::Solve 53ms 0.35% 73.53% 169ms 1.13% ompi_datatype_release_args 6ms 0.04% 73.57% 169ms 1.13% ompi_info_register_framework_params 169ms 1.13% 74.69% 169ms 1.13% std::isinf (inline) 36ms 0.24% 74.93% 168ms 1.12% __GI___libc_free 23ms 0.15% 75.09% 162ms 1.08% H5S_set_version 3ms 0.02% 75.11% 162ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 145ms 0.97% 76.07% 160ms 1.07% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 63ms 0.42% 76.49% 139ms 0.93% H5VM_array_calc 5ms 0.033% 76.53% 135ms 0.9% PMPI_Type_create_resized 131ms 0.87% 77.40% 131ms 0.87% ddot_ 47ms 0.31% 77.72% 130ms 0.87% _int_free 128ms 0.85% 78.57% 128ms 0.85% __memcpy_avx_unaligned_erms 2ms 0.013% 78.58% 121ms 0.81% ompi_datatype_duplicate 119ms 0.79% 79.38% 119ms 0.79% TimeStepper::CalculateNextTime 63ms 0.42% 79.80% 114ms 0.76% H5S_hyper_add_span_element 1ms 0.0067% 79.80% 113ms 0.75% VecDuplicate 58ms 0.39% 80.19% 113ms 0.75% std::__cxx11::basic_string::basic_string 10ms 0.067% 80.26% 112ms 0.75% VecDuplicate_MPI 111ms 0.74% 81.00% 111ms 0.74% __ieee754_log_fma 100ms 0.67% 81.67% 108ms 0.72% AbstractParameterisedSystem::SetAnyVariable 3ms 0.02% 81.69% 103ms 0.69% PMPI_File_set_view 4ms 0.027% 81.71% 99ms 0.66% VecNorm 96ms 0.64% 82.35% 96ms 0.64% H5VM_chunk_index_scaled 23ms 0.15% 82.51% 96ms 0.64% ompi_datatype_set_args 41ms 0.27% 82.78% 90ms 0.6% H5S_select_iter_next 90ms 0.6% 83.38% 90ms 0.6% asuint64 (inline) 87ms 0.58% 83.96% 87ms 0.58% H5VM_array_offset_pre 1ms 0.0067% 83.97% 87ms 0.58% opal_datatype_create_desc 23ms 0.15% 84.12% 86ms 0.57% __libc_calloc 1ms 0.0067% 84.13% 85ms 0.57% VecNorm_Seq 44ms 0.29% 84.42% 84ms 0.56% AbstractCardiacCell::GetVoltage (partial-inline) 6ms 0.04% 84.46% 84ms 0.56% MPI_Type_contiguous 84ms 0.56% 85.02% 84ms 0.56% [libm.so.6] 10ms 0.067% 85.09% 83ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 85.09% 83ms 0.55% std::vector::assign (inline) 3ms 0.02% 85.11% 82ms 0.55% H5D__chunk_allocated 1ms 0.0067% 85.11% 82ms 0.55% MPI_Type_create_hindexed 65ms 0.43% 85.55% 81ms 0.54% AbstractParameterisedSystem::GetAnyVariable 51ms 0.34% 85.89% 81ms 0.54% TimeStepper::AdvanceOneTimeStep 0 0% 85.89% 79ms 0.53% VecTDot 0 0% 85.89% 77ms 0.51% VecTDot_Seq 0 0% 85.89% 77ms 0.51% VecXDot_Seq_Private.constprop.0 1ms 0.0067% 85.90% 76ms 0.51% H5D__select_write 9ms 0.06% 85.96% 75ms 0.5% H5D__chunk_lookup 1ms 0.0067% 85.96% 75ms 0.5% H5Dgather