File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12766ms, 85.71% of 14895ms total Dropped 728 nodes (cum <= 74.47ms) flat flat% sum% cum cum% 0 0% 0% 14888ms 100% __libc_start_call_main 0 0% 0% 14888ms 100% __libc_start_main_impl 0 0% 0% 14888ms 100% _start 0 0% 0% 14885ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14885ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14885ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14885ms 99.93% main 0 0% 0% 14850ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14849ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14849ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14828ms 99.55% AbstractCardiacProblem::Solve 1ms 0.0067% 0.013% 11463ms 76.96% AbstractDynamicLinearPdeSolver::Solve 32ms 0.21% 0.23% 9207ms 61.81% AbstractCardiacTissue::SolveCellSystems 164ms 1.10% 1.33% 5707ms 38.31% AbstractCardiacCell::ComputeExceptVoltage 132ms 0.89% 2.22% 4849ms 32.55% AbstractOneStepIvpOdeSolver::InternalSolve 220ms 1.48% 3.69% 4135ms 27.76% EulerIvpOdeSolver::CalculateNextYValue 882ms 5.92% 9.61% 3851ms 25.85% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1722ms 11.56% 21.17% 3530ms 23.70% __GI___exp 0 0% 21.17% 3297ms 22.13% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.18% 3157ms 21.20% Hdf5DataWriter::PutVector 0 0% 21.18% 3122ms 20.96% H5Dwrite 4ms 0.027% 21.21% 3094ms 20.77% H5D__write 102ms 0.68% 21.89% 2666ms 17.90% AbstractCardiacTissue::UpdateCaches (inline) 817ms 5.49% 27.38% 2531ms 16.99% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.39% 1779ms 11.94% H5D__chunk_collective_write 15ms 0.1% 27.49% 1777ms 11.93% H5F_set_coll_metadata_reads 1579ms 10.60% 38.09% 1726ms 11.59% __ieee754_exp_fma 20ms 0.13% 38.23% 1595ms 10.71% H5FD_s3comms_uriencode 4ms 0.027% 38.25% 1452ms 9.75% LinearSystem::Solve 0 0% 38.25% 1313ms 8.82% KSPSolve 6ms 0.04% 38.29% 1313ms 8.82% KSPSolve_Private 4ms 0.027% 38.32% 1294ms 8.69% KSPSolve_CG 3ms 0.02% 38.34% 1228ms 8.24% H5F_block_write 1ms 0.0067% 38.35% 1225ms 8.22% H5PB_write 2ms 0.013% 38.36% 1224ms 8.22% H5FD_write 0 0% 38.36% 1224ms 8.22% H5F__accum_write 55ms 0.37% 38.73% 1218ms 8.18% 6ms 0.04% 38.77% 1204ms 8.08% H5D__chunk_cacheable 6ms 0.04% 38.81% 1148ms 7.71% H5D__mpio_select_write 443ms 2.97% 41.79% 1063ms 7.14% H5S_select_iterate 1ms 0.0067% 41.79% 1039ms 6.98% PMPI_File_write_at_all 1005ms 6.75% 48.54% 1006ms 6.75% __GI_pwritev64 13ms 0.087% 48.63% 936ms 6.28% std::pow (inline) 78ms 0.52% 49.15% 923ms 6.20% __pow 116ms 0.78% 49.93% 845ms 5.67% __ieee754_pow_fma 340ms 2.28% 52.21% 789ms 5.30% MonodomainSolver::SetupLinearSystem 2ms 0.013% 52.23% 673ms 4.52% PCApply 1ms 0.0067% 52.23% 666ms 4.47% PCApply_BJacobi_Singleblock 306ms 2.05% 54.29% 647ms 4.34% CellLuoRudy1991FromCellML::VerifyStateVariables 64ms 0.43% 54.72% 640ms 4.30% H5D__chunk_set_sizes 1ms 0.0067% 54.72% 631ms 4.24% KSPSolve_PREONLY 2ms 0.013% 54.74% 631ms 4.24% MatMult 625ms 4.20% 58.93% 629ms 4.22% MatMult_SeqAIJ 1ms 0.0067% 58.94% 626ms 4.20% PCApply_ICC 1ms 0.0067% 58.95% 625ms 4.20% MatSolve 614ms 4.12% 63.07% 624ms 4.19% MatSolve_SeqSBAIJ_1_NaturalOrdering 1ms 0.0067% 63.07% 488ms 3.28% KSP_PCApply.lto_priv.7 57ms 0.38% 63.46% 458ms 3.07% H5S_mpio_space_type 399ms 2.68% 66.14% 399ms 2.68% log_inline (inline) 285ms 1.91% 68.05% 287ms 1.93% exp_inline (inline) 187ms 1.26% 69.31% 278ms 1.87% TimeStepper::TimeStepper 2ms 0.013% 69.32% 261ms 1.75% KSPConvergedDefault 19ms 0.13% 69.45% 205ms 1.38% H5VM_chunk_index 44ms 0.3% 69.74% 202ms 1.36% __GI___libc_malloc 113ms 0.76% 70.50% 201ms 1.35% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 34ms 0.23% 70.73% 195ms 1.31% AbstractCardiacCell::SetVoltage (partial-inline) 143ms 0.96% 71.69% 189ms 1.27% _int_malloc 0 0% 71.69% 187ms 1.26% KSP_PCApply 110ms 0.74% 72.43% 186ms 1.25% top12 (inline) 8ms 0.054% 72.48% 172ms 1.15% ompi_datatype_create 166ms 1.11% 73.60% 166ms 1.11% [libchaste_heart.so] 160ms 1.07% 74.67% 160ms 1.07% std::isinf (inline) 130ms 0.87% 75.54% 158ms 1.06% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 126ms 0.85% 76.39% 158ms 1.06% AbstractOneStepIvpOdeSolver::Solve 6ms 0.04% 76.43% 151ms 1.01% ompi_datatype_destroy 35ms 0.23% 76.66% 150ms 1.01% __GI___libc_free 2ms 0.013% 76.68% 143ms 0.96% MPI_Type_free 18ms 0.12% 76.80% 140ms 0.94% H5S_set_version 0 0% 76.80% 139ms 0.93% Hdf5DataWriter::PutUnlimitedVariable 136ms 0.91% 77.71% 136ms 0.91% ddot_ 122ms 0.82% 78.53% 129ms 0.87% AbstractParameterisedSystem::SetAnyVariable 33ms 0.22% 78.75% 125ms 0.84% ompi_datatype_release_args 6ms 0.04% 78.79% 125ms 0.84% ompi_info_register_framework_params 54ms 0.36% 79.15% 122ms 0.82% H5VM_array_calc 1ms 0.0067% 79.16% 118ms 0.79% PMPI_File_set_view 55ms 0.37% 79.53% 115ms 0.77% H5S_hyper_add_span_element 45ms 0.3% 79.83% 115ms 0.77% _int_free 45ms 0.3% 80.13% 113ms 0.76% std::__cxx11::basic_string::basic_string 0 0% 80.13% 112ms 0.75% VecNorm 111ms 0.75% 80.88% 111ms 0.75% __ieee754_log_fma 109ms 0.73% 81.61% 109ms 0.73% TimeStepper::CalculateNextTime 107ms 0.72% 82.33% 107ms 0.72% H5VM_chunk_index_scaled 76ms 0.51% 82.84% 103ms 0.69% AbstractParameterisedSystem::GetAnyVariable 3ms 0.02% 82.86% 101ms 0.68% VecNorm_Seq 101ms 0.68% 83.54% 101ms 0.68% __memcpy_avx_unaligned_erms 1ms 0.0067% 83.54% 99ms 0.66% PMPI_Type_create_resized 1ms 0.0067% 83.55% 98ms 0.66% VecDuplicate 2ms 0.013% 83.56% 97ms 0.65% VecDuplicate_MPI 45ms 0.3% 83.87% 93ms 0.62% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0067% 83.87% 88ms 0.59% ompi_datatype_duplicate 82ms 0.55% 84.42% 82ms 0.55% [libm.so.6] 82ms 0.55% 84.97% 82ms 0.55% asuint64 (inline) 5ms 0.034% 85.01% 82ms 0.55% opal_datatype_create_desc 79ms 0.53% 85.54% 79ms 0.53% H5VM_array_offset_pre 22ms 0.15% 85.69% 79ms 0.53% __libc_calloc 3ms 0.02% 85.71% 78ms 0.52% MPI_Type_contiguous