File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 377ms, 84.53% of 446ms total Dropped 227 nodes (cum <= 2.23ms) flat flat% sum% cum cum% 0 0% 0% 437ms 97.98% __libc_start_call_main 0 0% 0% 437ms 97.98% __libc_start_main_impl 0 0% 0% 437ms 97.98% _start 0 0% 0% 434ms 97.31% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 434ms 97.31% CxxTest::TestRunner::runAllTests 0 0% 0% 434ms 97.31% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 434ms 97.31% main 0 0% 0% 395ms 88.57% CxxTest::RealTestDescription::run 0 0% 0% 395ms 88.57% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 395ms 88.57% CxxTest::TestRunner::runTest (inline) 0 0% 0% 395ms 88.57% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 395ms 88.57% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 391ms 87.67% AbstractCardiacProblem::Solve 0 0% 0% 390ms 87.44% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 345ms 77.35% LinearSystem::Solve 0 0% 0% 344ms 77.13% KSPSolve 1ms 0.22% 0.22% 344ms 77.13% KSPSolve_Private 1ms 0.22% 0.45% 343ms 76.91% KSPSolve_CG 0 0% 0.45% 207ms 46.41% KSP_PCApply.lto_priv.7 0 0% 0.45% 199ms 44.62% PCApply 0 0% 0.45% 199ms 44.62% PCApply_BJacobi_Singleblock 0 0% 0.45% 165ms 37.00% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 157ms 35.20% MatSolve 155ms 34.75% 35.20% 157ms 35.20% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.20% 157ms 35.20% PCApply_ICC 0 0% 35.20% 61ms 13.68% MatMult 1ms 0.22% 35.43% 61ms 13.68% MatMult_SeqAIJ (partial-inline) 60ms 13.45% 48.88% 61ms 13.68% MatMult_SeqAIJ_Inode (inline) 43ms 9.64% 58.52% 43ms 9.64% ddot_ 0 0% 58.52% 40ms 8.97% AbstractCardiacTissue::SolveCellSystems 0 0% 58.52% 35ms 7.85% CxxTest::RealWorldDescription::setUp 0 0% 58.52% 35ms 7.85% PMPI_Init_thread 0 0% 58.52% 35ms 7.85% PetscInitialize 0 0% 58.52% 35ms 7.85% PetscSetup::setUpWorld 0 0% 58.52% 35ms 7.85% PetscSetupUtils::CommonSetup 0 0% 58.52% 35ms 7.85% PetscSetupUtils::InitialisePetsc 0 0% 58.52% 35ms 7.85% ompi_mpi_init 1ms 0.22% 58.74% 34ms 7.62% VecTDot 0 0% 58.74% 33ms 7.40% VecTDot_Seq 0 0% 58.74% 33ms 7.40% VecXDot_Seq_Private.constprop.0 0 0% 58.74% 30ms 6.73% 1ms 0.22% 58.97% 29ms 6.50% MatNullSpaceRemove 0 0% 58.97% 24ms 5.38% orte_init 1ms 0.22% 59.19% 20ms 4.48% AbstractCardiacCell::ComputeExceptVoltage 0 0% 59.19% 18ms 4.04% VecMDot 18ms 4.04% 63.23% 18ms 4.04% VecMDot_Seq 0 0% 63.23% 18ms 4.04% VecMXDot_Private 0 0% 63.23% 15ms 3.36% VecAYPX 15ms 3.36% 66.59% 15ms 3.36% VecAYPX_Seq 0 0% 66.59% 14ms 3.14% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.45% 67.04% 14ms 3.14% AbstractOneStepIvpOdeSolver::InternalSolve 5ms 1.12% 68.16% 14ms 3.14% CellLuoRudy1991FromCellML::GetIIonic 0 0% 68.16% 14ms 3.14% hwloc_topology_load 0 0% 68.16% 13ms 2.91% hwloc_linux_get_tid_last_cpu_location 3ms 0.67% 68.83% 12ms 2.69% __GI___exp 0 0% 68.83% 12ms 2.69% mca_base_framework_open 0 0% 68.83% 11ms 2.47% KSP_PCApply (partial-inline) 0 0% 68.83% 11ms 2.47% VecNorm 0 0% 68.83% 11ms 2.47% VecNorm_Seq 0 0% 68.83% 11ms 2.47% __GI__dl_catch_exception 0 0% 68.83% 11ms 2.47% _dl_catch_error 0 0% 68.83% 11ms 2.47% _dlerror_run 0 0% 68.83% 11ms 2.47% mca_base_framework_components_register 0 0% 68.83% 11ms 2.47% mca_base_framework_register 1ms 0.22% 69.06% 10ms 2.24% VecAXPY 0 0% 69.06% 10ms 2.24% VecMAXPY 10ms 2.24% 71.30% 10ms 2.24% VecMAXPY_Seq 0 0% 71.30% 10ms 2.24% opal_stackframe_output 2ms 0.45% 71.75% 9ms 2.02% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 71.75% 9ms 2.02% EulerIvpOdeSolver::CalculateNextYValue 0 0% 71.75% 9ms 2.02% VecAXPY_Seq 8ms 1.79% 73.54% 9ms 2.02% __ieee754_exp_fma 9ms 2.02% 75.56% 9ms 2.02% daxpy_ 0 0% 75.56% 8ms 1.79% ___dlopen 0 0% 75.56% 8ms 1.79% _dl_init 0 0% 75.56% 8ms 1.79% _dl_open 0 0% 75.56% 8ms 1.79% _dl_start_user 2ms 0.45% 76.01% 8ms 1.79% boost::serialization::singleton::get_instance 0 0% 76.01% 8ms 1.79% call_init (inline) 0 0% 76.01% 8ms 1.79% dl_open_worker 0 0% 76.01% 8ms 1.79% dl_open_worker_begin 0 0% 76.01% 8ms 1.79% dlopen_doit 0 0% 76.01% 8ms 1.79% dlopen_implementation (inline) 0 0% 76.01% 7ms 1.57% PetscMemcpy (inline) 0 0% 76.01% 7ms 1.57% VecDuplicate 0 0% 76.01% 7ms 1.57% VecDuplicate_Seq 0 0% 76.01% 7ms 1.57% mca_base_component_find 0 0% 76.01% 7ms 1.57% mca_base_component_repository_open 6ms 1.35% 77.35% 6ms 1.35% __memcpy_avx_unaligned_erms 0 0% 77.35% 6ms 1.35% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 77.35% 6ms 1.35% opal_hwloc_base_get_topology 0 0% 77.35% 6ms 1.35% orte_ess_base_proc_binding 0 0% 77.35% 5ms 1.12% VecDestroy 3ms 0.67% 78.03% 5ms 1.12% __GI___libc_free 1ms 0.22% 78.25% 5ms 1.12% __GI___libc_malloc 1ms 0.22% 78.48% 5ms 1.12% _dl_map_object 0 0% 78.48% 4ms 0.9% BidomainSolver::SetupLinearSystem 2ms 0.45% 78.92% 4ms 0.9% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 78.92% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 78.92% 4ms 0.9% KSPConvergedDefault 0 0% 78.92% 4ms 0.9% KSPConvergedReasonViewFromOptions 0 0% 78.92% 4ms 0.9% PetscFinalize 0 0% 78.92% 4ms 0.9% PetscMallocA 0 0% 78.92% 4ms 0.9% PetscMallocAlign (partial-inline) 0 0% 78.92% 4ms 0.9% PetscMemzero (inline) 0 0% 78.92% 4ms 0.9% PetscOptionsFindPair 0 0% 78.92% 4ms 0.9% PetscOptionsGetViewer 0 0% 78.92% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 78.92% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 78.92% 4ms 0.9% VecCopy 0 0% 78.92% 4ms 0.9% VecCopy_Seq (partial-inline) 1ms 0.22% 79.15% 4ms 0.9% VecSetType (partial-inline) 4ms 0.9% 80.04% 4ms 0.9% __memset_avx2_unaligned_erms 1ms 0.22% 80.27% 4ms 0.9% __pow 0 0% 80.27% 4ms 0.9% _dl_lookup_symbol_x 0 0% 80.27% 4ms 0.9% _dl_map_object_deps 2ms 0.45% 80.72% 4ms 0.9% _int_malloc 0 0% 80.72% 4ms 0.9% mca_base_var_group_register 0 0% 80.72% 4ms 0.9% mca_base_var_register 0 0% 80.72% 4ms 0.9% openaux 0 0% 80.72% 4ms 0.9% std::pow (inline) 0 0% 80.72% 3ms 0.67% AbstractCardiacProblem::Initialise 0 0% 80.72% 3ms 0.67% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 80.72% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 80.72% 3ms 0.67% PetscFreeAlign 0 0% 80.72% 3ms 0.67% VecCreate 0 0% 80.72% 3ms 0.67% VecCreate_Seq 0 0% 80.72% 3ms 0.67% VecDestroy_Seq 0 0% 80.72% 3ms 0.67% XOpenDisplay 0 0% 80.72% 3ms 0.67% [hwloc_gl.so] 0 0% 80.72% 3ms 0.67% [libxcb.so.1.1.0] 0 0% 80.72% 3ms 0.67% _XConnectXCB 3ms 0.67% 81.39% 3ms 0.67% __GI___libc_read 0 0% 81.39% 3ms 0.67% __GI_exit 0 0% 81.39% 3ms 0.67% __cxa_finalize 0 0% 81.39% 3ms 0.67% __dlclose 0 0% 81.39% 3ms 0.67% __ieee754_pow_fma 0 0% 81.39% 3ms 0.67% __posix_memalign 0 0% 81.39% 3ms 0.67% __run_exit_handlers 3ms 0.67% 82.06% 3ms 0.67% __strcmp_avx2 3ms 0.67% 82.74% 3ms 0.67% __strlen_avx2 0 0% 82.74% 3ms 0.67% _dl_call_fini 0 0% 82.74% 3ms 0.67% _dl_close 1ms 0.22% 82.96% 3ms 0.67% _dl_close_worker (inline) 0 0% 82.96% 3ms 0.67% _dl_fini 0 0% 82.96% 3ms 0.67% _dl_open_relocate_one_object (inline) 0 0% 82.96% 3ms 0.67% _dl_relocate_object 1ms 0.22% 83.18% 3ms 0.67% _dl_runtime_resolve_xsavec 0 0% 83.18% 3ms 0.67% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 0 0% 83.18% 3ms 0.67% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 83.18% 3ms 0.67% boost::serialization::void_cast_detail::void_caster::recursive_register 3ms 0.67% 83.86% 3ms 0.67% do_lookup_x 0 0% 83.86% 3ms 0.67% elf_dynamic_do_Rela (inline) 1ms 0.22% 84.08% 3ms 0.67% kh_get_HO (inline) 2ms 0.45% 84.53% 3ms 0.67% malloc_consolidate 0 0% 84.53% 3ms 0.67% mca_base_component_repository_release 0 0% 84.53% 3ms 0.67% mca_base_component_var_register 0 0% 84.53% 3ms 0.67% mca_base_components_close 0 0% 84.53% 3ms 0.67% mca_base_framework_components_open 0 0% 84.53% 3ms 0.67% mca_topo_base_dist_graph_neighbors_count 0 0% 84.53% 3ms 0.67% ompi_mpi_finalize 0 0% 84.53% 3ms 0.67% xcb_connect_to_display_with_auth_info