File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12825ms, 86.23% of 14873ms total Dropped 723 nodes (cum <= 74.36ms) flat flat% sum% cum cum% 0 0% 0% 14866ms 100% __libc_start_call_main 0 0% 0% 14866ms 100% __libc_start_main_impl 0 0% 0% 14866ms 100% _start 0 0% 0% 14863ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14863ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14863ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14863ms 99.93% main 0 0% 0% 14826ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14826ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14826ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14804ms 99.54% AbstractCardiacProblem::Solve 3ms 0.02% 0.02% 11457ms 77.03% AbstractDynamicLinearPdeSolver::Solve 41ms 0.28% 0.3% 9192ms 61.80% AbstractCardiacTissue::SolveCellSystems 123ms 0.83% 1.12% 5703ms 38.34% AbstractCardiacCell::ComputeExceptVoltage 188ms 1.26% 2.39% 4931ms 33.15% AbstractOneStepIvpOdeSolver::InternalSolve 187ms 1.26% 3.64% 4193ms 28.19% EulerIvpOdeSolver::CalculateNextYValue 923ms 6.21% 9.85% 3958ms 26.61% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1713ms 11.52% 21.37% 3564ms 23.96% __GI___exp 0 0% 21.37% 3276ms 22.03% MonodomainProblem::WriteOneStep 2ms 0.013% 21.38% 3142ms 21.13% Hdf5DataWriter::PutVector 4ms 0.027% 21.41% 3115ms 20.94% H5Dwrite 4ms 0.027% 21.43% 3082ms 20.72% H5D__write 99ms 0.67% 22.10% 2623ms 17.64% AbstractCardiacTissue::UpdateCaches (inline) 824ms 5.54% 27.64% 2473ms 16.63% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.64% 1815ms 12.20% H5D__chunk_collective_write 21ms 0.14% 27.78% 1815ms 12.20% H5F_set_coll_metadata_reads 1646ms 11.07% 38.85% 1776ms 11.94% __ieee754_exp_fma 19ms 0.13% 38.98% 1608ms 10.81% H5FD_s3comms_uriencode 0 0% 38.98% 1483ms 9.97% LinearSystem::Solve 0 0% 38.98% 1335ms 8.98% KSPSolve 3ms 0.02% 39.00% 1335ms 8.98% KSPSolve_Private 1ms 0.0067% 39.00% 1316ms 8.85% KSPSolve_CG 1ms 0.0067% 39.01% 1203ms 8.09% H5F_block_write 50ms 0.34% 39.35% 1202ms 8.08% 4ms 0.027% 39.37% 1202ms 8.08% H5PB_write 1ms 0.0067% 39.38% 1198ms 8.05% H5FD_write 0 0% 39.38% 1198ms 8.05% H5F__accum_write 8ms 0.054% 39.43% 1154ms 7.76% H5D__chunk_cacheable 0 0% 39.43% 1117ms 7.51% H5D__mpio_select_write 1ms 0.0067% 39.44% 1025ms 6.89% PMPI_File_write_at_all 383ms 2.58% 42.02% 997ms 6.70% H5S_select_iterate 993ms 6.68% 48.69% 996ms 6.70% __GI_pwritev64 11ms 0.074% 48.77% 889ms 5.98% std::pow (inline) 81ms 0.54% 49.31% 877ms 5.90% __pow 106ms 0.71% 50.02% 796ms 5.35% __ieee754_pow_fma 326ms 2.19% 52.22% 758ms 5.10% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 52.22% 707ms 4.75% PCApply 3ms 0.02% 52.24% 699ms 4.70% PCApply_BJacobi_Singleblock 345ms 2.32% 54.56% 685ms 4.61% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 54.56% 663ms 4.46% KSPSolve_PREONLY 1ms 0.0067% 54.57% 658ms 4.42% PCApply_ICC 2ms 0.013% 54.58% 657ms 4.42% MatSolve 648ms 4.36% 58.94% 655ms 4.40% MatSolve_SeqSBAIJ_1_NaturalOrdering 77ms 0.52% 59.46% 631ms 4.24% H5D__chunk_set_sizes 2ms 0.013% 59.47% 625ms 4.20% MatMult 620ms 4.17% 63.64% 623ms 4.19% MatMult_SeqAIJ 3ms 0.02% 63.66% 515ms 3.46% KSP_PCApply.lto_priv.7 56ms 0.38% 64.04% 502ms 3.38% H5S_mpio_space_type 383ms 2.58% 66.61% 383ms 2.58% log_inline (inline) 270ms 1.82% 68.43% 273ms 1.84% exp_inline (inline) 145ms 0.97% 69.40% 267ms 1.80% TimeStepper::TimeStepper 2ms 0.013% 69.41% 254ms 1.71% KSPConvergedDefault 48ms 0.32% 69.74% 224ms 1.51% __GI___libc_malloc 172ms 1.16% 70.89% 209ms 1.41% _int_malloc 0 0% 70.89% 196ms 1.32% KSP_PCApply 23ms 0.15% 71.05% 185ms 1.24% H5VM_chunk_index 31ms 0.21% 71.26% 184ms 1.24% AbstractCardiacCell::SetVoltage (partial-inline) 82ms 0.55% 71.81% 178ms 1.20% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 7ms 0.047% 71.86% 177ms 1.19% ompi_datatype_create 86ms 0.58% 72.43% 161ms 1.08% top12 (inline) 159ms 1.07% 73.50% 159ms 1.07% [libchaste_heart.so] 155ms 1.04% 74.54% 155ms 1.04% std::isinf (inline) 131ms 0.88% 75.43% 152ms 1.02% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 119ms 0.8% 76.23% 151ms 1.02% AbstractOneStepIvpOdeSolver::Solve 6ms 0.04% 76.27% 147ms 0.99% ompi_datatype_destroy 7ms 0.047% 76.31% 145ms 0.97% MPI_Type_free 136ms 0.91% 77.23% 136ms 0.91% TimeStepper::CalculateNextTime 30ms 0.2% 77.43% 135ms 0.91% __GI___libc_free 20ms 0.13% 77.56% 134ms 0.9% H5S_set_version 0 0% 77.56% 133ms 0.89% Hdf5DataWriter::PutUnlimitedVariable 9ms 0.061% 77.62% 127ms 0.85% ompi_info_register_framework_params 125ms 0.84% 78.46% 125ms 0.84% __ieee754_log_fma 38ms 0.26% 78.72% 124ms 0.83% ompi_datatype_release_args 113ms 0.76% 79.48% 122ms 0.82% AbstractParameterisedSystem::SetAnyVariable 119ms 0.8% 80.28% 119ms 0.8% ddot_ 118ms 0.79% 81.07% 118ms 0.79% __memcpy_avx_unaligned_erms 2ms 0.013% 81.09% 117ms 0.79% PMPI_Type_create_resized 45ms 0.3% 81.39% 114ms 0.77% H5VM_array_calc 56ms 0.38% 81.77% 112ms 0.75% H5S_hyper_add_span_element 2ms 0.013% 81.78% 112ms 0.75% ompi_datatype_duplicate 87ms 0.58% 82.36% 111ms 0.75% AbstractParameterisedSystem::GetAnyVariable 2ms 0.013% 82.38% 110ms 0.74% PMPI_File_set_view 0 0% 82.38% 108ms 0.73% VecDuplicate 7ms 0.047% 82.42% 108ms 0.73% VecDuplicate_MPI 45ms 0.3% 82.73% 105ms 0.71% std::__cxx11::basic_string::basic_string 34ms 0.23% 82.96% 104ms 0.7% _int_free 3ms 0.02% 82.98% 94ms 0.63% VecNorm 42ms 0.28% 83.26% 90ms 0.61% AbstractCardiacCell::GetVoltage (partial-inline) 88ms 0.59% 83.85% 88ms 0.59% H5VM_chunk_index_scaled 0 0% 83.85% 85ms 0.57% VecNorm_Seq 81ms 0.54% 84.39% 81ms 0.54% asuint64 (inline) 2ms 0.013% 84.41% 78ms 0.52% MPI_Type_contiguous 15ms 0.1% 84.51% 77ms 0.52% __libc_calloc 4ms 0.027% 84.54% 77ms 0.52% opal_datatype_create_desc 76ms 0.51% 85.05% 76ms 0.51% std::vector::operator[] (inline) 26ms 0.17% 85.22% 75ms 0.5% H5S_select_iter_next 75ms 0.5% 85.73% 75ms 0.5% H5VM_array_offset_pre 75ms 0.5% 86.23% 75ms 0.5% [libm.so.6]