File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108128ms, 91.84% of 117732ms total Dropped 1139 nodes (cum <= 588.66ms) flat flat% sum% cum cum% 0 0% 0% 117716ms 100% __libc_start_call_main 0 0% 0% 117716ms 100% __libc_start_main_impl 0 0% 0% 117716ms 100% _start 0 0% 0% 117713ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 117713ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 117713ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 117713ms 100% main 0 0% 0% 117678ms 100% AbstractConvergenceTester::Converge 0 0% 0% 117678ms 100% CxxTest::RealTestDescription::run 0 0% 0% 117678ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 117678ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 117678ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 117678ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0017% 0.0017% 116425ms 98.89% AbstractCardiacProblem::Solve 6ms 0.0051% 0.0068% 115655ms 98.24% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0042% 0.011% 64414ms 54.71% LinearSystem::Solve 1ms 0.00085% 0.012% 64029ms 54.39% KSPSolve 9ms 0.0076% 0.02% 64028ms 54.38% KSPSolve_Private 10ms 0.0085% 0.028% 63667ms 54.08% KSPSolve_SYMMLQ 218ms 0.19% 0.21% 42493ms 36.09% AbstractCardiacTissue::SolveCellSystems 0 0% 0.21% 36574ms 31.07% PCApply 2ms 0.0017% 0.21% 36566ms 31.06% PCApply_BJacobi_Singleblock 3ms 0.0025% 0.22% 34218ms 29.06% KSPSolve_PREONLY (partial-inline) 3ms 0.0025% 0.22% 33074ms 28.09% PCApply_ICC 9ms 0.0076% 0.23% 33071ms 28.09% MatSolve 32549ms 27.65% 27.87% 33062ms 28.08% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1370ms 1.16% 29.04% 32727ms 27.80% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00085% 29.04% 31479ms 26.74% KSP_PCApply.lto_priv.18 7014ms 5.96% 35.00% 28331ms 24.06% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0068% 35.00% 21564ms 18.32% MatMult 238ms 0.2% 35.21% 21556ms 18.31% MatMult_SeqAIJ (partial-inline) 21047ms 17.88% 53.08% 21556ms 18.31% MatMult_SeqAIJ_Inode (inline) 1969ms 1.67% 54.75% 14798ms 12.57% CardiacNewtonSolver::Solve 349ms 0.3% 55.05% 8933ms 7.59% AbstractCardiacTissue::UpdateCaches (inline) 4383ms 3.72% 58.77% 8669ms 7.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2026ms 1.72% 60.50% 8401ms 7.14% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1149ms 0.98% 61.47% 7743ms 6.58% BidomainSolver::SetupLinearSystem 1ms 0.00085% 61.47% 7143ms 6.07% KSP_PCApply (partial-inline) 1056ms 0.9% 62.37% 7009ms 5.95% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5ms 0.0042% 62.37% 6529ms 5.55% KSPConvergedDefault 5690ms 4.83% 67.21% 5690ms 4.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3973ms 3.37% 70.58% 4015ms 3.41% __ieee754_log_fma 0 0% 70.58% 3718ms 3.16% boost::numeric::ublas::norm_inf (inline) 2503ms 2.13% 72.71% 3718ms 3.16% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.71% 3718ms 3.16% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.71% 3718ms 3.16% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 8ms 0.0068% 72.71% 3300ms 2.80% MatNullSpaceRemove 29ms 0.025% 72.74% 3054ms 2.59% std::pow (inline) 412ms 0.35% 73.09% 3020ms 2.57% __pow 2956ms 2.51% 75.60% 2956ms 2.51% __memcpy_avx_unaligned_erms 0 0% 75.60% 2916ms 2.48% PetscMemcpy (inline) 1731ms 1.47% 77.07% 2842ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2666ms 2.26% 79.33% 2666ms 2.26% ddot_ 333ms 0.28% 79.62% 2599ms 2.21% __ieee754_pow_fma 17ms 0.014% 79.63% 2433ms 2.07% VecCopy 6ms 0.0051% 79.64% 2415ms 2.05% VecCopy_Seq (partial-inline) 12ms 0.01% 79.65% 2365ms 2.01% VecAXPY 10ms 0.0085% 79.65% 2353ms 2.00% VecAXPY_Seq 2324ms 1.97% 81.63% 2324ms 1.97% daxpy_ 10ms 0.0085% 81.64% 2163ms 1.84% VecDot 2ms 0.0017% 81.64% 2153ms 1.83% VecDot_Seq 1ms 0.00085% 81.64% 2151ms 1.83% VecXDot_Seq_Private.constprop.0 1ms 0.00085% 81.64% 2076ms 1.76% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 81.64% 1843ms 1.57% VecMDot 12ms 0.01% 81.65% 1841ms 1.56% VecMXDot_Private 1820ms 1.55% 83.20% 1826ms 1.55% VecMDot_Seq 34ms 0.029% 83.23% 1748ms 1.48% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1565ms 1.33% 84.56% 1609ms 1.37% exp_inline (inline) 1497ms 1.27% 85.83% 1497ms 1.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 3ms 0.0025% 85.83% 1449ms 1.23% VecMAXPY 1439ms 1.22% 87.05% 1446ms 1.23% VecMAXPY_Seq 0 0% 87.05% 1428ms 1.21% AbstractFeAssemblerInterface::AssembleMatrix (inline) 10ms 0.0085% 87.06% 1148ms 0.98% boost::numeric::ublas::matrix_assign (inline) 210ms 0.18% 87.24% 1132ms 0.96% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.24% 1114ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.24% 1114ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.24% 1114ms 0.95% boost_numeric_ublas_abs (inline) 1114ms 0.95% 88.19% 1114ms 0.95% std::abs (inline) 0 0% 88.19% 1104ms 0.94% CuboidMeshConstructor::Construct 0 0% 88.19% 1103ms 0.94% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0017% 88.19% 1103ms 0.94% DistributedTetrahedralMesh::ConstructCuboid 836ms 0.71% 88.90% 1079ms 0.92% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0017% 88.90% 998ms 0.85% Element::Element 3ms 0.0025% 88.90% 990ms 0.84% AbstractTetrahedralElement::CalculateJacobian 976ms 0.83% 89.73% 976ms 0.83% __memset_avx2_unaligned_erms 0 0% 89.73% 968ms 0.82% PetscMemzero (inline) 2ms 0.0017% 89.73% 931ms 0.79% AbstractTetrahedralElement::AbstractTetrahedralElement 7ms 0.0059% 89.74% 902ms 0.77% BidomainAssembler::ComputeMatrixTerm 11ms 0.0093% 89.75% 882ms 0.75% boost::numeric::ublas::c_matrix::c_matrix (inline) 849ms 0.72% 90.47% 849ms 0.72% [libchaste_heart.so] 2ms 0.0017% 90.47% 815ms 0.69% VecDuplicate 5ms 0.0042% 90.47% 753ms 0.64% VecScale 2ms 0.0017% 90.48% 748ms 0.64% VecScale_Seq 743ms 0.63% 91.11% 743ms 0.63% dscal_ 0 0% 91.11% 717ms 0.61% BidomainProblem::WriteOneStep 4ms 0.0034% 91.11% 708ms 0.6% VecNorm 1ms 0.00085% 91.11% 706ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 219ms 0.19% 91.30% 700ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0025% 91.30% 697ms 0.59% VecNorm_Seq 17ms 0.014% 91.32% 694ms 0.59% PetscMallocA 6ms 0.0051% 91.32% 677ms 0.58% PetscMallocAlign (partial-inline) 0 0% 91.32% 648ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 615ms 0.52% 91.84% 615ms 0.52% log_inline (inline)