File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12758ms, 87.49% of 14582ms total Dropped 726 nodes (cum <= 72.91ms) flat flat% sum% cum cum% 0 0% 0% 14573ms 99.94% __libc_start_call_main 0 0% 0% 14573ms 99.94% __libc_start_main_impl 0 0% 0% 14573ms 99.94% _start 0 0% 0% 14571ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14571ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14571ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14571ms 99.92% main 0 0% 0% 14542ms 99.73% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14542ms 99.73% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14542ms 99.73% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0069% 0.0069% 14521ms 99.58% AbstractCardiacProblem::Solve 4ms 0.027% 0.034% 10998ms 75.42% AbstractDynamicLinearPdeSolver::Solve 59ms 0.4% 0.44% 8616ms 59.09% AbstractCardiacTissue::SolveCellSystems 60ms 0.41% 0.85% 5231ms 35.87% AbstractCardiacCell::ComputeExceptVoltage 108ms 0.74% 1.59% 4695ms 32.20% AbstractOneStepIvpOdeSolver::InternalSolve 149ms 1.02% 2.61% 4016ms 27.54% EulerIvpOdeSolver::CalculateNextYValue 1014ms 6.95% 9.57% 3836ms 26.31% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 9.57% 3457ms 23.71% MonodomainProblem::WriteOneStep 0 0% 9.57% 3340ms 22.90% Hdf5DataWriter::PutVector 3ms 0.021% 9.59% 3326ms 22.81% H5Dwrite 3ms 0.021% 9.61% 3299ms 22.62% H5D__write 1141ms 7.82% 17.43% 3039ms 20.84% __GI___exp 88ms 0.6% 18.04% 2550ms 17.49% AbstractCardiacTissue::UpdateCaches (inline) 766ms 5.25% 23.29% 2416ms 16.57% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.29% 2109ms 14.46% H5D__chunk_collective_write 18ms 0.12% 23.41% 2109ms 14.46% H5F_set_coll_metadata_reads 9ms 0.062% 23.47% 1840ms 12.62% H5FD_s3comms_uriencode 2ms 0.014% 23.49% 1657ms 11.36% LinearSystem::Solve 0 0% 23.49% 1541ms 10.57% KSPSolve 4ms 0.027% 23.52% 1541ms 10.57% KSPSolve_Private 2ms 0.014% 23.53% 1527ms 10.47% KSPSolve_CG 1ms 0.0069% 23.54% 1482ms 10.16% H5FD_write 0 0% 23.54% 1482ms 10.16% H5F__accum_write 0 0% 23.54% 1482ms 10.16% H5F_block_write 0 0% 23.54% 1482ms 10.16% H5PB_write 40ms 0.27% 23.81% 1478ms 10.14% 1441ms 9.88% 33.69% 1444ms 9.90% __ieee754_exp_fma 1ms 0.0069% 33.70% 1426ms 9.78% H5D__mpio_select_write 0 0% 33.70% 1322ms 9.07% PMPI_File_write_at_all 1298ms 8.90% 42.60% 1301ms 8.92% __GI_pwritev64 6ms 0.041% 42.64% 1115ms 7.65% H5D__chunk_cacheable 352ms 2.41% 45.06% 955ms 6.55% H5S_select_iterate 20ms 0.14% 45.19% 893ms 6.12% std::pow (inline) 80ms 0.55% 45.74% 864ms 5.93% __pow 0 0% 45.74% 794ms 5.45% PCApply 1ms 0.0069% 45.75% 792ms 5.43% PCApply_BJacobi_Singleblock 65ms 0.45% 46.19% 777ms 5.33% __ieee754_pow_fma 1ms 0.0069% 46.20% 760ms 5.21% KSPSolve_PREONLY 3ms 0.021% 46.22% 753ms 5.16% MatSolve 0 0% 46.22% 753ms 5.16% PCApply_ICC 746ms 5.12% 51.34% 750ms 5.14% MatSolve_SeqSBAIJ_1_NaturalOrdering 266ms 1.82% 53.16% 695ms 4.77% MonodomainSolver::SetupLinearSystem 654ms 4.48% 57.65% 654ms 4.48% [libchaste_heart.so] 434ms 2.98% 60.62% 623ms 4.27% CellLuoRudy1991FromCellML::VerifyStateVariables 69ms 0.47% 61.10% 611ms 4.19% H5D__chunk_set_sizes 3ms 0.021% 61.12% 599ms 4.11% MatMult 593ms 4.07% 65.18% 596ms 4.09% MatMult_SeqAIJ 0 0% 65.18% 507ms 3.48% KSP_PCApply.lto_priv.7 469ms 3.22% 68.40% 469ms 3.22% [libm.so.6] 58ms 0.4% 68.80% 450ms 3.09% H5S_mpio_space_type 416ms 2.85% 71.65% 416ms 2.85% log_inline (inline) 3ms 0.021% 71.67% 394ms 2.70% KSPConvergedDefault 121ms 0.83% 72.50% 348ms 2.39% TimeStepper::TimeStepper 280ms 1.92% 74.42% 290ms 1.99% exp_inline (inline) 0 0% 74.42% 287ms 1.97% KSP_PCApply 20ms 0.14% 74.56% 241ms 1.65% H5VM_chunk_index 231ms 1.58% 76.14% 231ms 1.58% TimeStepper::CalculateNextTime 225ms 1.54% 77.68% 225ms 1.54% ddot_ 15ms 0.1% 77.79% 212ms 1.45% ompi_datatype_destroy 90ms 0.62% 78.40% 207ms 1.42% __GI___libc_malloc 4ms 0.027% 78.43% 204ms 1.40% MPI_Type_free 25ms 0.17% 78.60% 181ms 1.24% __GI___libc_free 180ms 1.23% 79.84% 180ms 1.23% H5VM_chunk_index_scaled 49ms 0.34% 80.17% 179ms 1.23% ompi_datatype_release_args 5ms 0.034% 80.21% 179ms 1.23% ompi_info_register_framework_params 163ms 1.12% 81.33% 163ms 1.12% __ieee754_log_fma 13ms 0.089% 81.42% 163ms 1.12% ompi_datatype_create 98ms 0.67% 82.09% 156ms 1.07% _int_free 29ms 0.2% 82.29% 140ms 0.96% AbstractCardiacCell::SetVoltage (partial-inline) 135ms 0.93% 83.21% 135ms 0.93% [libchaste_ode.so] 108ms 0.74% 83.95% 134ms 0.92% AbstractOneStepIvpOdeSolver::Solve 0 0% 83.95% 129ms 0.88% VecNorm 0 0% 83.95% 127ms 0.87% VecTDot 0 0% 83.95% 127ms 0.87% VecTDot_Seq 1ms 0.0069% 83.96% 127ms 0.87% VecXDot_Seq_Private.constprop.0 2ms 0.014% 83.97% 125ms 0.86% VecNorm_Seq 71ms 0.49% 84.46% 124ms 0.85% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 94ms 0.64% 85.10% 123ms 0.84% _int_malloc 0 0% 85.10% 117ms 0.8% Hdf5DataWriter::PutUnlimitedVariable 1ms 0.0069% 85.11% 116ms 0.8% PMPI_File_set_view 0 0% 85.11% 115ms 0.79% VecDuplicate 1ms 0.0069% 85.12% 115ms 0.79% VecDuplicate_MPI 26ms 0.18% 85.30% 110ms 0.75% H5S_set_version 44ms 0.3% 85.60% 107ms 0.73% H5S_hyper_add_span_element 1ms 0.0069% 85.61% 105ms 0.72% PMPI_Type_create_resized 30ms 0.21% 85.81% 88ms 0.6% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 30ms 0.21% 86.02% 88ms 0.6% ompi_datatype_set_args 58ms 0.4% 86.41% 87ms 0.6% __libc_calloc 33ms 0.23% 86.64% 84ms 0.58% H5VM_array_calc 27ms 0.19% 86.83% 84ms 0.58% std::__cxx11::basic_string::basic_string 3ms 0.021% 86.85% 83ms 0.57% ompi_datatype_duplicate 1ms 0.0069% 86.85% 80ms 0.55% opal_datatype_create_desc 64ms 0.44% 87.29% 79ms 0.54% AbstractParameterisedSystem::GetAnyVariable 4ms 0.027% 87.32% 77ms 0.53% VecCreate 25ms 0.17% 87.49% 76ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline)