File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 439ms, 89.96% of 488ms total Dropped 231 nodes (cum <= 2.44ms) flat flat% sum% cum cum% 0 0% 0% 478ms 97.95% __libc_start_call_main 0 0% 0% 478ms 97.95% __libc_start_main_impl 0 0% 0% 478ms 97.95% _start 0 0% 0% 475ms 97.34% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 475ms 97.34% CxxTest::TestRunner::runAllTests 0 0% 0% 475ms 97.34% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 475ms 97.34% main 0 0% 0% 432ms 88.52% CxxTest::RealTestDescription::run 0 0% 0% 432ms 88.52% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 88.52% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 88.52% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 88.52% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 428ms 87.70% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.09% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 386ms 79.10% LinearSystem::Solve 0 0% 0% 385ms 78.89% KSPSolve 0 0% 0% 385ms 78.89% KSPSolve_Private 1ms 0.2% 0.2% 384ms 78.69% KSPSolve_CG 0 0% 0.2% 239ms 48.98% KSP_PCApply.lto_priv.7 0 0% 0.2% 227ms 46.52% PCApply 0 0% 0.2% 227ms 46.52% PCApply_BJacobi_Singleblock 0 0% 0.2% 210ms 43.03% KSPSolve_PREONLY (partial-inline) 0 0% 0.2% 199ms 40.78% MatSolve 197ms 40.37% 40.57% 199ms 40.78% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 40.57% 199ms 40.78% PCApply_ICC 0 0% 40.57% 73ms 14.96% MatMult 0 0% 40.57% 73ms 14.96% MatMult_SeqAIJ 73ms 14.96% 55.53% 73ms 14.96% MatMult_SeqAIJ_Inode (inline) 49ms 10.04% 65.57% 49ms 10.04% ddot_ 0 0% 65.57% 39ms 7.99% CxxTest::RealWorldDescription::setUp 0 0% 65.57% 39ms 7.99% PetscInitialize 0 0% 65.57% 39ms 7.99% PetscSetup::setUpWorld 0 0% 65.57% 39ms 7.99% PetscSetupUtils::CommonSetup 0 0% 65.57% 39ms 7.99% PetscSetupUtils::InitialisePetsc 0 0% 65.57% 39ms 7.99% VecTDot 0 0% 65.57% 39ms 7.99% VecTDot_Seq 0 0% 65.57% 39ms 7.99% VecXDot_Seq_Private.constprop.0 0 0% 65.57% 38ms 7.79% PMPI_Init_thread 0 0% 65.57% 38ms 7.79% ompi_mpi_init 1ms 0.2% 65.78% 30ms 6.15% AbstractCardiacTissue::SolveCellSystems 0 0% 65.78% 29ms 5.94% 0 0% 65.78% 27ms 5.53% MatNullSpaceRemove 0 0% 65.78% 23ms 4.71% orte_init 0 0% 65.78% 21ms 4.30% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.78% 20ms 4.10% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.2% 65.98% 20ms 4.10% EulerIvpOdeSolver::CalculateNextYValue 0 0% 65.98% 20ms 4.10% __GI__dl_catch_exception 0 0% 65.98% 20ms 4.10% _dl_catch_error 0 0% 65.98% 20ms 4.10% _dlerror_run 5ms 1.02% 67.01% 19ms 3.89% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 67.01% 18ms 3.69% ___dlopen 0 0% 67.01% 18ms 3.69% _dl_open 0 0% 67.01% 18ms 3.69% dlopen_doit 0 0% 67.01% 18ms 3.69% dlopen_implementation (inline) 0 0% 67.01% 18ms 3.69% mca_base_framework_open 0 0% 67.01% 18ms 3.69% opal_stackframe_output 0 0% 67.01% 17ms 3.48% VecAYPX 17ms 3.48% 70.49% 17ms 3.48% VecAYPX_Seq 0 0% 70.49% 17ms 3.48% dl_open_worker 0 0% 70.49% 17ms 3.48% mca_base_framework_components_register 0 0% 70.49% 17ms 3.48% mca_base_framework_register 0 0% 70.49% 16ms 3.28% mca_base_component_find 0 0% 70.49% 16ms 3.28% mca_base_component_repository_open 0 0% 70.49% 14ms 2.87% VecMDot 14ms 2.87% 73.36% 14ms 2.87% VecMDot_Seq 0 0% 73.36% 14ms 2.87% VecMXDot_Private 0 0% 73.36% 14ms 2.87% hwloc_topology_load 1ms 0.2% 73.57% 13ms 2.66% VecMAXPY 10ms 2.05% 75.61% 13ms 2.66% __GI___exp 0 0% 75.61% 13ms 2.66% _dl_init 0 0% 75.61% 13ms 2.66% call_init (inline) 11ms 2.25% 77.87% 12ms 2.46% VecMAXPY_Seq 0 0% 77.87% 12ms 2.46% hwloc_linux_get_tid_last_cpu_location 1ms 0.2% 78.07% 11ms 2.25% VecNorm 0 0% 78.07% 11ms 2.25% dl_open_worker_begin 0 0% 78.07% 10ms 2.05% KSP_PCApply (inline) 0 0% 78.07% 10ms 2.05% VecNorm_Seq 0 0% 78.07% 9ms 1.84% VecAXPY 0 0% 78.07% 9ms 1.84% VecAXPY_Seq 9ms 1.84% 79.92% 9ms 1.84% daxpy_ 1ms 0.2% 80.12% 8ms 1.64% BidomainSolver::SetupLinearSystem 0 0% 80.12% 8ms 1.64% _dl_start_user 0 0% 80.12% 8ms 1.64% mca_base_framework_components_open 1ms 0.2% 80.33% 7ms 1.43% _dl_map_object 2ms 0.41% 80.74% 7ms 1.43% boost::serialization::singleton::get_instance 0 0% 80.74% 7ms 1.43% mca_topo_base_dist_graph_neighbors_count 0 0% 80.74% 5ms 1.02% VecDestroy 0 0% 80.74% 5ms 1.02% VecDuplicate 0 0% 80.74% 5ms 1.02% VecDuplicate_Seq 3ms 0.61% 81.35% 5ms 1.02% __GI___libc_malloc 1ms 0.2% 81.56% 5ms 1.02% _dl_map_object_from_fd 0 0% 81.56% 5ms 1.02% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 81.56% 5ms 1.02% opal_hwloc_base_get_topology 0 0% 81.56% 5ms 1.02% orte_ess_base_proc_binding 0 0% 81.56% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 81.56% 4ms 0.82% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.61% 82.17% 4ms 0.82% CellLuoRudy1991FromCellML::GetIIonic 0 0% 82.17% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 82.17% 4ms 0.82% PetscFinalize 0 0% 82.17% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 82.17% 4ms 0.82% PetscSetupUtils::CommonFinalize 4ms 0.82% 82.99% 4ms 0.82% __GI___clock_nanosleep 4ms 0.82% 83.81% 4ms 0.82% __GI___libc_read 0 0% 83.81% 4ms 0.82% __GI___nanosleep 0 0% 83.81% 4ms 0.82% _dl_open_relocate_one_object (inline) 0 0% 83.81% 4ms 0.82% _dl_relocate_object 1ms 0.2% 84.02% 4ms 0.82% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.02% 4ms 0.82% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.02% 4ms 0.82% elf_dynamic_do_Rela (inline) 0 0% 84.02% 4ms 0.82% ompi_mpi_finalize 0 0% 84.02% 4ms 0.82% usleep 1ms 0.2% 84.22% 3ms 0.61% PetscFreeAlign 0 0% 84.22% 3ms 0.61% PetscMallocA 0 0% 84.22% 3ms 0.61% PetscMallocAlign (partial-inline) 0 0% 84.22% 3ms 0.61% PetscMemzero (inline) 1ms 0.2% 84.43% 3ms 0.61% VecCreate 0 0% 84.43% 3ms 0.61% XOpenDisplay 0 0% 84.43% 3ms 0.61% [hwloc_gl.so] 0 0% 84.43% 3ms 0.61% _XConnectXCB 0 0% 84.43% 3ms 0.61% __GI___libc_free 0 0% 84.43% 3ms 0.61% __GI_exit 3ms 0.61% 85.04% 3ms 0.61% __GI_munmap 0 0% 85.04% 3ms 0.61% __cxa_finalize 3ms 0.61% 85.66% 3ms 0.61% __ieee754_exp_fma 3ms 0.61% 86.27% 3ms 0.61% __libc_openat64 3ms 0.61% 86.89% 3ms 0.61% __memcpy_avx_unaligned_erms 3ms 0.61% 87.50% 3ms 0.61% __memset_avx2_unaligned_erms 3ms 0.61% 88.11% 3ms 0.61% __mmap64 0 0% 88.11% 3ms 0.61% __run_exit_handlers 3ms 0.61% 88.73% 3ms 0.61% __strcmp_avx2 0 0% 88.73% 3ms 0.61% _dl_call_fini 0 0% 88.73% 3ms 0.61% _dl_fini 0 0% 88.73% 3ms 0.61% _dl_lookup_symbol_x 0 0% 88.73% 3ms 0.61% _dl_map_segments (inline) 3ms 0.61% 89.34% 3ms 0.61% _int_free 0 0% 89.34% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 89.34% 3ms 0.61% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 3ms 0.61% 89.96% 3ms 0.61% do_lookup_x 0 0% 89.96% 3ms 0.61% elf_machine_rela (inline) 0 0% 89.96% 3ms 0.61% operator new 0 0% 89.96% 3ms 0.61% resolve_map (inline) 0 0% 89.96% 3ms 0.61% xcb_connect_to_display_with_auth_info