File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116316ms, 91.42% of 127237ms total Dropped 1160 nodes (cum <= 636.18ms) flat flat% sum% cum cum% 0 0% 0% 127218ms 100% __libc_start_call_main 0 0% 0% 127218ms 100% __libc_start_main_impl 0 0% 0% 127218ms 100% _start 0 0% 0% 127214ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127214ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127214ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127214ms 100% main 0 0% 0% 127176ms 100% AbstractConvergenceTester::Converge 0 0% 0% 127176ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127176ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127176ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127176ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127176ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 5ms 0.0039% 0.0039% 126000ms 99.03% AbstractCardiacProblem::Solve 11ms 0.0086% 0.013% 125134ms 98.35% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0055% 0.018% 68557ms 53.88% LinearSystem::Solve 3ms 0.0024% 0.02% 68025ms 53.46% KSPSolve 10ms 0.0079% 0.028% 68022ms 53.46% KSPSolve_Private 12ms 0.0094% 0.038% 67681ms 53.19% KSPSolve_SYMMLQ 433ms 0.34% 0.38% 47341ms 37.21% AbstractCardiacTissue::SolveCellSystems 4ms 0.0031% 0.38% 39343ms 30.92% PCApply 7ms 0.0055% 0.39% 39324ms 30.91% PCApply_BJacobi_Singleblock 1046ms 0.82% 1.21% 37252ms 29.28% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.21% 36988ms 29.07% KSPSolve_PREONLY (partial-inline) 3ms 0.0024% 1.21% 35913ms 28.23% PCApply_ICC 9ms 0.0071% 1.22% 35910ms 28.22% MatSolve 35499ms 27.90% 29.12% 35901ms 28.22% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00079% 29.12% 33755ms 26.53% KSP_PCApply.lto_priv.18 7603ms 5.98% 35.10% 32888ms 25.85% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0055% 35.10% 22810ms 17.93% MatMult 291ms 0.23% 35.33% 22803ms 17.92% MatMult_SeqAIJ (partial-inline) 22289ms 17.52% 52.85% 22802ms 17.92% MatMult_SeqAIJ_Inode (inline) 2249ms 1.77% 54.62% 16946ms 13.32% CardiacNewtonSolver::Solve 5602ms 4.40% 59.02% 10153ms 7.98% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1414ms 1.11% 60.13% 9836ms 7.73% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 194ms 0.15% 60.28% 8774ms 6.90% AbstractCardiacTissue::UpdateCaches (inline) 1642ms 1.29% 61.57% 8198ms 6.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 8128ms 6.39% 67.96% 8128ms 6.39% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1227ms 0.96% 68.92% 8022ms 6.30% BidomainSolver::SetupLinearSystem 0 0% 68.92% 7504ms 5.90% KSP_PCApply (partial-inline) 6ms 0.0047% 68.93% 7079ms 5.56% KSPConvergedDefault 4253ms 3.34% 72.27% 4341ms 3.41% __ieee754_log_fma 0 0% 72.27% 4100ms 3.22% boost::numeric::ublas::norm_inf (inline) 2848ms 2.24% 74.51% 4100ms 3.22% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.51% 4100ms 3.22% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.51% 4100ms 3.22% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0055% 74.52% 3309ms 2.60% MatNullSpaceRemove 3287ms 2.58% 77.10% 3287ms 2.58% ddot_ 35ms 0.028% 77.13% 3131ms 2.46% std::pow (inline) 2031ms 1.60% 78.72% 3129ms 2.46% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 422ms 0.33% 79.05% 3076ms 2.42% __pow 2764ms 2.17% 81.23% 2764ms 2.17% __memcpy_avx_unaligned_erms 1ms 0.00079% 81.23% 2734ms 2.15% PetscMemcpy (inline) 5ms 0.0039% 81.23% 2648ms 2.08% VecDot 0 0% 81.23% 2643ms 2.08% VecDot_Seq 4ms 0.0031% 81.24% 2643ms 2.08% VecXDot_Seq_Private.constprop.0 346ms 0.27% 81.51% 2618ms 2.06% __ieee754_pow_fma 15ms 0.012% 81.52% 2359ms 1.85% VecCopy 4ms 0.0031% 81.52% 2343ms 1.84% VecCopy_Seq (partial-inline) 13ms 0.01% 81.53% 2071ms 1.63% VecAXPY 9ms 0.0071% 81.54% 2058ms 1.62% VecAXPY_Seq 1ms 0.00079% 81.54% 2057ms 1.62% VecMDot 9ms 0.0071% 81.55% 2056ms 1.62% VecMXDot_Private 2029ms 1.59% 83.14% 2041ms 1.60% VecMDot_Seq 2035ms 1.60% 84.74% 2035ms 1.60% daxpy_ 3ms 0.0024% 84.74% 2004ms 1.58% AbstractFeVolumeIntegralAssembler::DoAssemble 25ms 0.02% 84.76% 1670ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1521ms 1.20% 85.96% 1572ms 1.24% exp_inline (inline) 0 0% 85.96% 1385ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 10ms 0.0079% 85.97% 1245ms 0.98% VecMAXPY 0 0% 85.97% 1240ms 0.97% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.97% 1240ms 0.97% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.97% 1240ms 0.97% boost_numeric_ublas_abs (inline) 1240ms 0.97% 86.94% 1240ms 0.97% std::abs (inline) 1231ms 0.97% 87.91% 1235ms 0.97% VecMAXPY_Seq 1ms 0.00079% 87.91% 1093ms 0.86% boost::numeric::ublas::matrix_assign (inline) 220ms 0.17% 88.08% 1089ms 0.86% boost::numeric::ublas::indexing_matrix_assign 721ms 0.57% 88.65% 1044ms 0.82% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1016ms 0.8% 89.45% 1016ms 0.8% [libchaste_heart.so] 0 0% 89.45% 1014ms 0.8% CuboidMeshConstructor::Construct 0 0% 89.45% 1013ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 4ms 0.0031% 89.45% 1013ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 3ms 0.0024% 89.45% 914ms 0.72% Element::Element 4ms 0.0031% 89.46% 912ms 0.72% VecNorm 6ms 0.0047% 89.46% 906ms 0.71% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0024% 89.46% 904ms 0.71% VecNorm_Seq 10ms 0.0079% 89.47% 889ms 0.7% BidomainAssembler::ComputeMatrixTerm 2ms 0.0016% 89.47% 859ms 0.68% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 89.47% 857ms 0.67% AbstractTetrahedralElement::AbstractTetrahedralElement 252ms 0.2% 89.67% 855ms 0.67% AbstractBidomainSolver::CheckCompatibilityCondition 7ms 0.0055% 89.68% 830ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 7ms 0.0055% 89.68% 808ms 0.64% VecScale 0 0% 89.68% 801ms 0.63% VecScale_Seq 800ms 0.63% 90.31% 800ms 0.63% dscal_ 0 0% 90.31% 795ms 0.62% BidomainProblem::WriteOneStep 739ms 0.58% 90.89% 739ms 0.58% __memset_avx2_unaligned_erms 0 0% 90.89% 725ms 0.57% PetscMemzero (inline) 2ms 0.0016% 90.89% 710ms 0.56% VecDuplicate 667ms 0.52% 91.42% 667ms 0.52% log_inline (inline)