File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 385ms, 86.13% of 447ms total Dropped 182 nodes (cum <= 2.23ms) flat flat% sum% cum cum% 0 0% 0% 440ms 98.43% __libc_start_call_main 0 0% 0% 440ms 98.43% __libc_start_main_impl 0 0% 0% 440ms 98.43% _start 0 0% 0% 437ms 97.76% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 437ms 97.76% CxxTest::TestRunner::runAllTests 0 0% 0% 437ms 97.76% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 437ms 97.76% main 0 0% 0% 399ms 89.26% CxxTest::RealTestDescription::run 0 0% 0% 399ms 89.26% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 399ms 89.26% CxxTest::TestRunner::runTest (inline) 0 0% 0% 399ms 89.26% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 399ms 89.26% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 394ms 88.14% AbstractCardiacProblem::Solve 0 0% 0% 393ms 87.92% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 354ms 79.19% LinearSystem::Solve 0 0% 0% 352ms 78.75% KSPSolve 0 0% 0% 352ms 78.75% KSPSolve_CG 2ms 0.45% 0.45% 352ms 78.75% KSPSolve_Private 1ms 0.22% 0.67% 217ms 48.55% KSP_PCApply.lto_priv.7 0 0% 0.67% 209ms 46.76% PCApply 0 0% 0.67% 209ms 46.76% PCApply_BJacobi_Singleblock 0 0% 0.67% 172ms 38.48% KSPSolve_PREONLY (partial-inline) 0 0% 0.67% 164ms 36.69% MatSolve 159ms 35.57% 36.24% 164ms 36.69% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.24% 164ms 36.69% PCApply_ICC 0 0% 36.24% 69ms 15.44% MatMult 3ms 0.67% 36.91% 69ms 15.44% MatMult_SeqAIJ (partial-inline) 66ms 14.77% 51.68% 69ms 15.44% MatMult_SeqAIJ_Inode (inline) 44ms 9.84% 61.52% 44ms 9.84% ddot_ 1ms 0.22% 61.74% 34ms 7.61% AbstractCardiacTissue::SolveCellSystems 0 0% 61.74% 34ms 7.61% CxxTest::RealWorldDescription::setUp 0 0% 61.74% 34ms 7.61% PMPI_Init_thread 0 0% 61.74% 34ms 7.61% PetscInitialize 0 0% 61.74% 34ms 7.61% PetscSetup::setUpWorld 0 0% 61.74% 34ms 7.61% PetscSetupUtils::CommonSetup 0 0% 61.74% 34ms 7.61% PetscSetupUtils::InitialisePetsc 0 0% 61.74% 34ms 7.61% ompi_mpi_init 0 0% 61.74% 31ms 6.94% MatNullSpaceRemove 2ms 0.45% 62.19% 27ms 6.04% 1ms 0.22% 62.42% 25ms 5.59% AbstractCardiacCell::ComputeExceptVoltage 0 0% 62.42% 25ms 5.59% VecTDot 0 0% 62.42% 25ms 5.59% VecTDot_Seq 0 0% 62.42% 25ms 5.59% VecXDot_Seq_Private.constprop.0 1ms 0.22% 62.64% 22ms 4.92% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 62.64% 22ms 4.92% orte_init 0 0% 62.64% 19ms 4.25% VecNorm 0 0% 62.64% 19ms 4.25% VecNorm_Seq 6ms 1.34% 63.98% 18ms 4.03% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 63.98% 18ms 4.03% EulerIvpOdeSolver::CalculateNextYValue 0 0% 63.98% 17ms 3.80% VecMAXPY 15ms 3.36% 67.34% 17ms 3.80% VecMAXPY_Seq 0 0% 67.34% 14ms 3.13% VecMDot 14ms 3.13% 70.47% 14ms 3.13% VecMDot_Seq 0 0% 70.47% 14ms 3.13% VecMXDot_Private 0 0% 70.47% 14ms 3.13% hwloc_topology_load 0 0% 70.47% 14ms 3.13% mca_base_framework_open 7ms 1.57% 72.04% 13ms 2.91% __GI___exp 0 0% 72.04% 13ms 2.91% __GI__dl_catch_exception 0 0% 72.04% 13ms 2.91% ___dlopen 0 0% 72.04% 13ms 2.91% _dl_catch_error 0 0% 72.04% 13ms 2.91% _dl_open 0 0% 72.04% 13ms 2.91% _dlerror_run 0 0% 72.04% 13ms 2.91% dl_open_worker 0 0% 72.04% 13ms 2.91% dl_open_worker_begin 0 0% 72.04% 13ms 2.91% dlopen_doit 0 0% 72.04% 13ms 2.91% dlopen_implementation (inline) 0 0% 72.04% 13ms 2.91% mca_base_framework_components_register 0 0% 72.04% 13ms 2.91% mca_base_framework_register 0 0% 72.04% 12ms 2.68% KSP_PCApply (partial-inline) 0 0% 72.04% 12ms 2.68% hwloc_linux_get_tid_last_cpu_location 2ms 0.45% 72.48% 11ms 2.46% VecAXPY 0 0% 72.48% 11ms 2.46% VecDuplicate 0 0% 72.48% 11ms 2.46% mca_base_component_find 0 0% 72.48% 11ms 2.46% mca_base_component_repository_open 0 0% 72.48% 11ms 2.46% opal_stackframe_output 1ms 0.22% 72.71% 10ms 2.24% VecDuplicate_Seq 0 0% 72.71% 10ms 2.24% _dl_map_object 0 0% 72.71% 9ms 2.01% VecAXPY_Seq 0 0% 72.71% 9ms 2.01% VecAYPX 9ms 2.01% 74.72% 9ms 2.01% VecAYPX_Seq 8ms 1.79% 76.51% 8ms 1.79% __memset_avx2_unaligned_erms 8ms 1.79% 78.30% 8ms 1.79% daxpy_ 0 0% 78.30% 7ms 1.57% PetscMallocA 0 0% 78.30% 7ms 1.57% PetscMallocAlign (partial-inline) 0 0% 78.30% 7ms 1.57% PetscMemzero (inline) 0 0% 78.30% 7ms 1.57% _dl_init 0 0% 78.30% 7ms 1.57% _dl_start_user 0 0% 78.30% 7ms 1.57% call_init (inline) 5ms 1.12% 79.42% 6ms 1.34% __ieee754_exp_fma 1ms 0.22% 79.64% 6ms 1.34% _dl_map_object_from_fd 0 0% 79.64% 5ms 1.12% BidomainSolver::SetupLinearSystem 0 0% 79.64% 5ms 1.12% PetscMemcpy (inline) 0 0% 79.64% 5ms 1.12% VecCreate 0 0% 79.64% 5ms 1.12% VecSetType 5ms 1.12% 80.76% 5ms 1.12% __memcpy_avx_unaligned_erms 0 0% 80.76% 5ms 1.12% _dl_map_object_deps 2ms 0.45% 81.21% 5ms 1.12% boost::serialization::singleton::get_instance 0 0% 81.21% 5ms 1.12% opal_hwloc_base_get_topology 0 0% 81.21% 5ms 1.12% openaux 0 0% 81.21% 5ms 1.12% orte_ess_base_proc_binding 0 0% 81.21% 4ms 0.89% AbstractCardiacProblem::Initialise 0 0% 81.21% 4ms 0.89% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.22% 81.43% 4ms 0.89% CellLuoRudy1991FromCellML::GetIIonic 0 0% 81.43% 4ms 0.89% CxxTest::RealWorldDescription::tearDown 0 0% 81.43% 4ms 0.89% KSPConvergedDefault 0 0% 81.43% 4ms 0.89% KSPConvergedReasonViewFromOptions 0 0% 81.43% 4ms 0.89% PetscFinalize 2ms 0.45% 81.88% 4ms 0.89% PetscOptionsFindPair 0 0% 81.88% 4ms 0.89% PetscOptionsGetViewer 0 0% 81.88% 4ms 0.89% PetscSetup::tearDownWorld 0 0% 81.88% 4ms 0.89% PetscSetupUtils::CommonFinalize 0 0% 81.88% 4ms 0.89% VecCreate_Seq 0 0% 81.88% 4ms 0.89% VecDestroy 2ms 0.45% 82.33% 4ms 0.89% __GI___libc_malloc 0 0% 82.33% 4ms 0.89% mca_base_framework_components_open 0 0% 82.33% 4ms 0.89% ompi_mpi_finalize 0 0% 82.33% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.22% 82.55% 3ms 0.67% MPI_Comm_set_attr 1ms 0.22% 82.77% 3ms 0.67% PetscFreeAlign 0 0% 82.77% 3ms 0.67% PetscHeaderCreate_Private 0 0% 82.77% 3ms 0.67% VecSet 0 0% 82.77% 3ms 0.67% VecSet_Seq (partial-inline) 0 0% 82.77% 3ms 0.67% XOpenDisplay 0 0% 82.77% 3ms 0.67% [hwloc_gl.so] 2ms 0.45% 83.22% 3ms 0.67% __GI___libc_free 3ms 0.67% 83.89% 3ms 0.67% __GI___libc_read 0 0% 83.89% 3ms 0.67% __GI_exit 0 0% 83.89% 3ms 0.67% __cxa_finalize 3ms 0.67% 84.56% 3ms 0.67% __libc_openat64 3ms 0.67% 85.23% 3ms 0.67% __mmap64 0 0% 85.23% 3ms 0.67% __posix_memalign 0 0% 85.23% 3ms 0.67% __run_exit_handlers 0 0% 85.23% 3ms 0.67% _dl_call_fini 0 0% 85.23% 3ms 0.67% _dl_fini 0 0% 85.23% 3ms 0.67% _dl_map_segments (inline) 0 0% 85.23% 3ms 0.67% _dl_open_relocate_one_object (inline) 0 0% 85.23% 3ms 0.67% _dl_relocate_object 1ms 0.22% 85.46% 3ms 0.67% _dl_runtime_resolve_xsavec 0 0% 85.46% 3ms 0.67% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 85.46% 3ms 0.67% mca_topo_base_dist_graph_neighbors_count 3ms 0.67% 86.13% 3ms 0.67% strcmp