File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 112637ms, 91.77% of 122745ms total Dropped 1154 nodes (cum <= 613.73ms) flat flat% sum% cum cum% 0 0% 0% 122729ms 100% __libc_start_call_main 0 0% 0% 122729ms 100% __libc_start_main_impl 0 0% 0% 122729ms 100% _start 0 0% 0% 122726ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 122726ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 122726ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 122726ms 100% main 0 0% 0% 122688ms 100% AbstractConvergenceTester::Converge 0 0% 0% 122688ms 100% CxxTest::RealTestDescription::run 0 0% 0% 122688ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 122688ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 122688ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 122688ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0016% 0.0016% 121389ms 98.90% AbstractCardiacProblem::Solve 8ms 0.0065% 0.0081% 120529ms 98.19% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0041% 0.012% 68340ms 55.68% LinearSystem::Solve 3ms 0.0024% 0.015% 67772ms 55.21% KSPSolve 11ms 0.009% 0.024% 67769ms 55.21% KSPSolve_Private 16ms 0.013% 0.037% 67290ms 54.82% KSPSolve_SYMMLQ 213ms 0.17% 0.21% 43037ms 35.06% AbstractCardiacTissue::SolveCellSystems 4ms 0.0033% 0.21% 37936ms 30.91% PCApply 2ms 0.0016% 0.22% 37921ms 30.89% PCApply_BJacobi_Singleblock 3ms 0.0024% 0.22% 35185ms 28.67% KSPSolve_PREONLY (partial-inline) 2ms 0.0016% 0.22% 34078ms 27.76% PCApply_ICC 4ms 0.0033% 0.22% 34076ms 27.76% MatSolve 33546ms 27.33% 27.55% 34072ms 27.76% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1425ms 1.16% 28.71% 33071ms 26.94% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00081% 28.71% 32669ms 26.62% KSP_PCApply.lto_priv.18 6860ms 5.59% 34.30% 28668ms 23.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 10ms 0.0081% 34.31% 23458ms 19.11% MatMult 200ms 0.16% 34.47% 23448ms 19.10% MatMult_SeqAIJ (partial-inline) 22932ms 18.68% 53.16% 23448ms 19.10% MatMult_SeqAIJ_Inode (inline) 1912ms 1.56% 54.71% 14720ms 11.99% CardiacNewtonSolver::Solve 474ms 0.39% 55.10% 9104ms 7.42% AbstractCardiacTissue::UpdateCaches (inline) 4446ms 3.62% 58.72% 8688ms 7.08% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1960ms 1.60% 60.32% 8431ms 6.87% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1093ms 0.89% 61.21% 8151ms 6.64% BidomainSolver::SetupLinearSystem 1236ms 1.01% 62.22% 7715ms 6.29% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00081% 62.22% 7272ms 5.92% KSP_PCApply (partial-inline) 6ms 0.0049% 62.22% 6676ms 5.44% KSPConvergedDefault 6214ms 5.06% 67.29% 6214ms 5.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3919ms 3.19% 70.48% 3959ms 3.23% __ieee754_log_fma 0 0% 70.48% 3688ms 3.00% boost::numeric::ublas::norm_inf (inline) 2469ms 2.01% 72.49% 3688ms 3.00% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.49% 3688ms 3.00% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.49% 3688ms 3.00% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3468ms 2.83% 75.31% 3468ms 2.83% __memcpy_avx_unaligned_erms 0 0% 75.31% 3442ms 2.80% PetscMemcpy (inline) 9ms 0.0073% 75.32% 3407ms 2.78% MatNullSpaceRemove 31ms 0.025% 75.35% 3177ms 2.59% std::pow (inline) 380ms 0.31% 75.66% 3135ms 2.55% __pow 23ms 0.019% 75.68% 2963ms 2.41% VecCopy 4ms 0.0033% 75.68% 2938ms 2.39% VecCopy_Seq (partial-inline) 1680ms 1.37% 77.05% 2792ms 2.27% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2781ms 2.27% 79.31% 2781ms 2.27% ddot_ 364ms 0.3% 79.61% 2747ms 2.24% __ieee754_pow_fma 13ms 0.011% 79.62% 2518ms 2.05% VecAXPY 6ms 0.0049% 79.63% 2505ms 2.04% VecAXPY_Seq 2490ms 2.03% 81.65% 2490ms 2.03% daxpy_ 2ms 0.0016% 81.66% 2261ms 1.84% VecDot 1ms 0.00081% 81.66% 2259ms 1.84% VecDot_Seq 0 0% 81.66% 2258ms 1.84% VecXDot_Seq_Private.constprop.0 3ms 0.0024% 81.66% 2078ms 1.69% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.66% 1976ms 1.61% VecMDot 7ms 0.0057% 81.66% 1976ms 1.61% VecMXDot_Private 1956ms 1.59% 83.26% 1960ms 1.60% VecMDot_Seq 33ms 0.027% 83.28% 1740ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1579ms 1.29% 84.57% 1637ms 1.33% exp_inline (inline) 0 0% 84.57% 1423ms 1.16% AbstractFeAssemblerInterface::AssembleMatrix (inline) 4ms 0.0033% 84.57% 1422ms 1.16% VecMAXPY 1409ms 1.15% 85.72% 1418ms 1.16% VecMAXPY_Seq 1302ms 1.06% 86.78% 1302ms 1.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1278ms 1.04% 87.82% 1278ms 1.04% __memset_avx2_unaligned_erms 0 0% 87.82% 1258ms 1.02% PetscMemzero (inline) 7ms 0.0057% 87.83% 1137ms 0.93% boost::numeric::ublas::matrix_assign (inline) 220ms 0.18% 88.01% 1124ms 0.92% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.01% 1116ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.01% 1116ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.01% 1116ms 0.91% boost_numeric_ublas_abs (inline) 1116ms 0.91% 88.92% 1116ms 0.91% std::abs (inline) 0 0% 88.92% 1115ms 0.91% CuboidMeshConstructor::Construct 0 0% 88.92% 1114ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.92% 1114ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 775ms 0.63% 89.55% 1059ms 0.86% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00081% 89.55% 1024ms 0.83% VecDuplicate 5ms 0.0041% 89.55% 1010ms 0.82% Element::Element 6ms 0.0049% 89.56% 993ms 0.81% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0033% 89.56% 946ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 10ms 0.0081% 89.57% 891ms 0.73% VecScale 887ms 0.72% 90.29% 887ms 0.72% [libchaste_heart.so] 1ms 0.00081% 90.29% 881ms 0.72% VecScale_Seq 876ms 0.71% 91.01% 876ms 0.71% dscal_ 8ms 0.0065% 91.01% 861ms 0.7% boost::numeric::ublas::c_matrix::c_matrix (inline) 10ms 0.0081% 91.02% 853ms 0.69% PetscMallocA 5ms 0.0041% 91.03% 846ms 0.69% BidomainAssembler::ComputeMatrixTerm 9ms 0.0073% 91.03% 843ms 0.69% PetscMallocAlign (partial-inline) 1ms 0.00081% 91.04% 801ms 0.65% BidomainProblem::WriteOneStep 3ms 0.0024% 91.04% 788ms 0.64% VecNorm 1ms 0.00081% 91.04% 778ms 0.63% VecNorm_Seq 684ms 0.56% 91.60% 684ms 0.56% log_inline (inline) 2ms 0.0016% 91.60% 667ms 0.54% AbstractBidomainSolver::FinaliseLinearSystem 203ms 0.17% 91.76% 664ms 0.54% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.76% 655ms 0.53% AbstractFeAssemblerInterface::Assemble (inline) 3ms 0.0024% 91.77% 652ms 0.53% VecDuplicate_Seq