File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12856ms, 86.26% of 14904ms total Dropped 729 nodes (cum <= 74.52ms) flat flat% sum% cum cum% 0 0% 0% 14897ms 100% __libc_start_call_main 0 0% 0% 14897ms 100% __libc_start_main_impl 0 0% 0% 14897ms 100% _start 0 0% 0% 14895ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14895ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14895ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14895ms 99.94% main 0 0% 0% 14859ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14859ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14859ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14838ms 99.56% AbstractCardiacProblem::Solve 3ms 0.02% 0.034% 11396ms 76.46% AbstractDynamicLinearPdeSolver::Solve 42ms 0.28% 0.32% 9186ms 61.63% AbstractCardiacTissue::SolveCellSystems 162ms 1.09% 1.40% 5708ms 38.30% AbstractCardiacCell::ComputeExceptVoltage 185ms 1.24% 2.64% 4884ms 32.77% AbstractOneStepIvpOdeSolver::InternalSolve 144ms 0.97% 3.61% 4106ms 27.55% EulerIvpOdeSolver::CalculateNextYValue 903ms 6.06% 9.67% 3888ms 26.09% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1724ms 11.57% 21.24% 3551ms 23.83% __GI___exp 1ms 0.0067% 21.24% 3368ms 22.60% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.25% 3201ms 21.48% Hdf5DataWriter::PutVector 1ms 0.0067% 21.26% 3190ms 21.40% H5Dwrite 2ms 0.013% 21.27% 3159ms 21.20% H5D__write 102ms 0.68% 21.95% 2662ms 17.86% AbstractCardiacTissue::UpdateCaches (inline) 817ms 5.48% 27.44% 2515ms 16.87% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.44% 1809ms 12.14% H5D__chunk_collective_write 18ms 0.12% 27.56% 1809ms 12.14% H5F_set_coll_metadata_reads 1599ms 10.73% 38.29% 1748ms 11.73% __ieee754_exp_fma 18ms 0.12% 38.41% 1622ms 10.88% H5FD_s3comms_uriencode 1ms 0.0067% 38.41% 1484ms 9.96% LinearSystem::Solve 1ms 0.0067% 38.42% 1345ms 9.02% KSPSolve 0 0% 38.42% 1344ms 9.02% KSPSolve_Private 9ms 0.06% 38.48% 1332ms 8.94% KSPSolve_CG 9ms 0.06% 38.54% 1232ms 8.27% H5D__chunk_cacheable 1ms 0.0067% 38.55% 1220ms 8.19% H5F_block_write 1ms 0.0067% 38.55% 1219ms 8.18% H5FD_write 0 0% 38.55% 1219ms 8.18% H5F__accum_write 0 0% 38.55% 1219ms 8.18% H5PB_write 47ms 0.32% 38.87% 1216ms 8.16% 3ms 0.02% 38.89% 1124ms 7.54% H5D__mpio_select_write 415ms 2.78% 41.67% 1075ms 7.21% H5S_select_iterate 2ms 0.013% 41.69% 1026ms 6.88% PMPI_File_write_at_all 1000ms 6.71% 48.40% 1001ms 6.72% __GI_pwritev64 6ms 0.04% 48.44% 891ms 5.98% std::pow (inline) 78ms 0.52% 48.96% 885ms 5.94% __pow 101ms 0.68% 49.64% 805ms 5.40% __ieee754_pow_fma 309ms 2.07% 51.71% 702ms 4.71% MonodomainSolver::SetupLinearSystem 0 0% 51.71% 687ms 4.61% PCApply 0 0% 51.71% 684ms 4.59% PCApply_BJacobi_Singleblock 82ms 0.55% 52.26% 667ms 4.48% H5D__chunk_set_sizes 0 0% 52.26% 654ms 4.39% KSPSolve_PREONLY 1ms 0.0067% 52.27% 652ms 4.37% MatSolve 0 0% 52.27% 652ms 4.37% PCApply_ICC 646ms 4.33% 56.60% 651ms 4.37% MatSolve_SeqSBAIJ_1_NaturalOrdering 309ms 2.07% 58.68% 631ms 4.23% CellLuoRudy1991FromCellML::VerifyStateVariables 4ms 0.027% 58.70% 618ms 4.15% MatMult 614ms 4.12% 62.82% 614ms 4.12% MatMult_SeqAIJ 0 0% 62.82% 485ms 3.25% KSP_PCApply.lto_priv.7 57ms 0.38% 63.20% 481ms 3.23% H5S_mpio_space_type 383ms 2.57% 65.77% 383ms 2.57% log_inline (inline) 130ms 0.87% 66.65% 278ms 1.87% TimeStepper::TimeStepper 273ms 1.83% 68.48% 274ms 1.84% exp_inline (inline) 1ms 0.0067% 68.48% 267ms 1.79% KSPConvergedDefault 49ms 0.33% 68.81% 234ms 1.57% __GI___libc_malloc 179ms 1.20% 70.01% 221ms 1.48% _int_malloc 19ms 0.13% 70.14% 212ms 1.42% H5VM_chunk_index 0 0% 70.14% 204ms 1.37% KSP_PCApply 99ms 0.66% 70.81% 195ms 1.31% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 111ms 0.74% 71.55% 194ms 1.30% top12 (inline) 11ms 0.074% 71.63% 184ms 1.23% ompi_datatype_create 151ms 1.01% 72.64% 175ms 1.17% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 170ms 1.14% 73.78% 170ms 1.14% [libchaste_heart.so] 9ms 0.06% 73.84% 169ms 1.13% ompi_datatype_destroy 0 0% 73.84% 166ms 1.11% Hdf5DataWriter::PutUnlimitedVariable 126ms 0.85% 74.68% 163ms 1.09% AbstractOneStepIvpOdeSolver::Solve 3ms 0.02% 74.70% 162ms 1.09% MPI_Type_free 24ms 0.16% 74.87% 161ms 1.08% __GI___libc_free 156ms 1.05% 75.91% 156ms 1.05% TimeStepper::CalculateNextTime 155ms 1.04% 76.95% 155ms 1.04% std::isinf (inline) 7ms 0.047% 77.00% 148ms 0.99% ompi_info_register_framework_params 46ms 0.31% 77.31% 147ms 0.99% ompi_datatype_release_args 30ms 0.2% 77.51% 140ms 0.94% AbstractCardiacCell::SetVoltage (partial-inline) 62ms 0.42% 77.93% 136ms 0.91% _int_free 16ms 0.11% 78.03% 133ms 0.89% H5S_set_version 127ms 0.85% 78.88% 127ms 0.85% ddot_ 59ms 0.4% 79.28% 121ms 0.81% H5S_hyper_add_span_element 36ms 0.24% 79.52% 117ms 0.79% H5VM_array_calc 112ms 0.75% 80.27% 112ms 0.75% __ieee754_log_fma 3ms 0.02% 80.29% 110ms 0.74% VecDuplicate 2ms 0.013% 80.31% 107ms 0.72% VecDuplicate_MPI 106ms 0.71% 81.02% 106ms 0.71% H5VM_chunk_index_scaled 3ms 0.02% 81.04% 105ms 0.7% PMPI_File_set_view 5ms 0.034% 81.07% 105ms 0.7% PMPI_Type_create_resized 45ms 0.3% 81.37% 104ms 0.7% std::__cxx11::basic_string::basic_string 3ms 0.02% 81.39% 98ms 0.66% ompi_datatype_duplicate 94ms 0.63% 82.02% 97ms 0.65% AbstractParameterisedSystem::SetAnyVariable 94ms 0.63% 82.66% 94ms 0.63% __memcpy_avx_unaligned_erms 73ms 0.49% 83.15% 93ms 0.62% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 83.15% 90ms 0.6% VecNorm 88ms 0.59% 83.74% 88ms 0.59% H5VM_array_offset_pre 47ms 0.32% 84.06% 87ms 0.58% AbstractCardiacCell::GetVoltage (partial-inline) 28ms 0.19% 84.25% 87ms 0.58% __libc_calloc 86ms 0.58% 84.82% 86ms 0.58% asuint64 (inline) 43ms 0.29% 85.11% 84ms 0.56% H5SL_search 8ms 0.054% 85.17% 83ms 0.56% MPI_Type_create_hindexed 81ms 0.54% 85.71% 81ms 0.54% [libm.so.6] 6ms 0.04% 85.75% 80ms 0.54% PMPI_Type_vector 1ms 0.0067% 85.76% 80ms 0.54% VecNorm_Seq 25ms 0.17% 85.92% 80ms 0.54% ompi_datatype_set_args 2ms 0.013% 85.94% 79ms 0.53% H5D__chunk_allocated 46ms 0.31% 86.25% 79ms 0.53% TimeStepper::AdvanceOneTimeStep 0 0% 86.25% 79ms 0.53% VecTDot 0 0% 86.25% 78ms 0.52% VecTDot_Seq 1ms 0.0067% 86.25% 78ms 0.52% VecXDot_Seq_Private.constprop.0 1ms 0.0067% 86.26% 78ms 0.52% opal_datatype_create_desc 0 0% 86.26% 75ms 0.5% H5D__select_write 0 0% 86.26% 75ms 0.5% H5Dgather