File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12818ms, 85.77% of 14945ms total Dropped 743 nodes (cum <= 74.72ms) flat flat% sum% cum cum% 0 0% 0% 14938ms 100% __libc_start_call_main 0 0% 0% 14938ms 100% __libc_start_main_impl 0 0% 0% 14938ms 100% _start 0 0% 0% 14935ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14935ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14935ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14935ms 99.93% main 0 0% 0% 14897ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14897ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14897ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14876ms 99.54% AbstractCardiacProblem::Solve 1ms 0.0067% 0.013% 11396ms 76.25% AbstractDynamicLinearPdeSolver::Solve 32ms 0.21% 0.23% 9238ms 61.81% AbstractCardiacTissue::SolveCellSystems 150ms 1.00% 1.23% 5809ms 38.87% AbstractCardiacCell::ComputeExceptVoltage 187ms 1.25% 2.48% 5039ms 33.72% AbstractOneStepIvpOdeSolver::InternalSolve 174ms 1.16% 3.65% 4299ms 28.77% EulerIvpOdeSolver::CalculateNextYValue 906ms 6.06% 9.71% 4054ms 27.13% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1841ms 12.32% 22.03% 3701ms 24.76% __GI___exp 1ms 0.0067% 22.03% 3415ms 22.85% MonodomainProblem::WriteOneStep 1ms 0.0067% 22.04% 3264ms 21.84% Hdf5DataWriter::PutVector 1ms 0.0067% 22.05% 3246ms 21.72% H5Dwrite 1ms 0.0067% 22.05% 3214ms 21.51% H5D__write 81ms 0.54% 22.60% 2569ms 17.19% AbstractCardiacTissue::UpdateCaches (inline) 825ms 5.52% 28.12% 2449ms 16.39% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.12% 1850ms 12.38% H5D__chunk_collective_write 28ms 0.19% 28.30% 1850ms 12.38% H5F_set_coll_metadata_reads 1629ms 10.90% 39.20% 1788ms 11.96% __ieee754_exp_fma 15ms 0.1% 39.30% 1611ms 10.78% H5FD_s3comms_uriencode 1ms 0.0067% 39.31% 1390ms 9.30% LinearSystem::Solve 0 0% 39.31% 1269ms 8.49% KSPSolve 1ms 0.0067% 39.32% 1269ms 8.49% KSPSolve_Private 5ms 0.033% 39.35% 1257ms 8.41% KSPSolve_CG 9ms 0.06% 39.41% 1251ms 8.37% H5D__chunk_cacheable 2ms 0.013% 39.42% 1201ms 8.04% H5F_block_write 1ms 0.0067% 39.43% 1199ms 8.02% H5PB_write 0 0% 39.43% 1198ms 8.02% H5FD_write 0 0% 39.43% 1198ms 8.02% H5F__accum_write 50ms 0.33% 39.77% 1194ms 7.99% 0 0% 39.77% 1110ms 7.43% H5D__mpio_select_write 437ms 2.92% 42.69% 1095ms 7.33% H5S_select_iterate 0 0% 42.69% 989ms 6.62% PMPI_File_write_at_all 953ms 6.38% 49.07% 959ms 6.42% __GI_pwritev64 3ms 0.02% 49.09% 854ms 5.71% std::pow (inline) 90ms 0.6% 49.69% 851ms 5.69% __pow 82ms 0.55% 50.24% 761ms 5.09% __ieee754_pow_fma 322ms 2.15% 52.39% 745ms 4.98% MonodomainSolver::SetupLinearSystem 318ms 2.13% 54.52% 673ms 4.50% CellLuoRudy1991FromCellML::VerifyStateVariables 78ms 0.52% 55.04% 667ms 4.46% H5D__chunk_set_sizes 5ms 0.033% 55.08% 629ms 4.21% PCApply 0 0% 55.08% 624ms 4.18% PCApply_BJacobi_Singleblock 1ms 0.0067% 55.08% 594ms 3.97% KSPSolve_PREONLY 1ms 0.0067% 55.09% 588ms 3.93% MatSolve 0 0% 55.09% 588ms 3.93% PCApply_ICC 575ms 3.85% 58.94% 587ms 3.93% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 58.96% 585ms 3.91% MatMult 579ms 3.87% 62.83% 582ms 3.89% MatMult_SeqAIJ 71ms 0.48% 63.31% 517ms 3.46% H5S_mpio_space_type 0 0% 63.31% 420ms 2.81% KSP_PCApply.lto_priv.7 400ms 2.68% 65.98% 400ms 2.68% log_inline (inline) 6ms 0.04% 66.02% 286ms 1.91% KSPConvergedDefault 245ms 1.64% 67.66% 247ms 1.65% exp_inline (inline) 117ms 0.78% 68.44% 243ms 1.63% TimeStepper::TimeStepper 54ms 0.36% 68.81% 216ms 1.45% __GI___libc_malloc 0 0% 68.81% 213ms 1.43% KSP_PCApply 17ms 0.11% 68.92% 194ms 1.30% H5VM_chunk_index 112ms 0.75% 69.67% 189ms 1.26% top12 (inline) 188ms 1.26% 70.93% 188ms 1.26% [libchaste_heart.so] 36ms 0.24% 71.17% 185ms 1.24% AbstractCardiacCell::SetVoltage (partial-inline) 136ms 0.91% 72.08% 184ms 1.23% _int_malloc 7ms 0.047% 72.12% 182ms 1.22% ompi_datatype_create 10ms 0.067% 72.19% 177ms 1.18% ompi_datatype_destroy 101ms 0.68% 72.87% 175ms 1.17% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 9ms 0.06% 72.93% 175ms 1.17% MPI_Type_free 167ms 1.12% 74.04% 167ms 1.12% std::isinf (inline) 33ms 0.22% 74.27% 166ms 1.11% __GI___libc_free 163ms 1.09% 75.36% 163ms 1.09% ddot_ 6ms 0.04% 75.40% 158ms 1.06% ompi_info_register_framework_params 46ms 0.31% 75.70% 157ms 1.05% ompi_datatype_release_args 1ms 0.0067% 75.71% 150ms 1.00% Hdf5DataWriter::PutUnlimitedVariable 117ms 0.78% 76.49% 143ms 0.96% AbstractOneStepIvpOdeSolver::Solve 13ms 0.087% 76.58% 141ms 0.94% H5S_set_version 118ms 0.79% 77.37% 135ms 0.9% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 3ms 0.02% 77.39% 135ms 0.9% PMPI_File_set_view 135ms 0.9% 78.29% 135ms 0.9% TimeStepper::CalculateNextTime 53ms 0.35% 78.65% 132ms 0.88% _int_free 64ms 0.43% 79.08% 129ms 0.86% H5S_hyper_add_span_element 50ms 0.33% 79.41% 128ms 0.86% H5VM_array_calc 111ms 0.74% 80.15% 121ms 0.81% AbstractParameterisedSystem::SetAnyVariable 119ms 0.8% 80.95% 119ms 0.8% __memcpy_avx_unaligned_erms 4ms 0.027% 80.98% 112ms 0.75% PMPI_Type_create_resized 6ms 0.04% 81.02% 111ms 0.74% VecNorm 45ms 0.3% 81.32% 110ms 0.74% std::__cxx11::basic_string::basic_string 0 0% 81.32% 102ms 0.68% VecDuplicate 4ms 0.027% 81.34% 102ms 0.68% VecDuplicate_MPI 1ms 0.0067% 81.35% 100ms 0.67% ompi_datatype_duplicate 1ms 0.0067% 81.36% 96ms 0.64% VecNorm_Seq 95ms 0.64% 81.99% 95ms 0.64% H5VM_chunk_index_scaled 2ms 0.013% 82.01% 94ms 0.63% VecTDot 93ms 0.62% 82.63% 94ms 0.63% __ieee754_log_fma 0 0% 82.63% 92ms 0.62% VecTDot_Seq 2ms 0.013% 82.64% 92ms 0.62% VecXDot_Seq_Private.constprop.0 15ms 0.1% 82.74% 88ms 0.59% std::vector::_M_assign_aux (inline) 0 0% 82.74% 88ms 0.59% std::vector::assign (inline) 85ms 0.57% 83.31% 85ms 0.57% std::vector::operator[] (inline) 1ms 0.0067% 83.32% 84ms 0.56% opal_datatype_create_desc 83ms 0.56% 83.87% 83ms 0.56% H5VM_array_offset_pre 82ms 0.55% 84.42% 82ms 0.55% asuint64 (inline) 3ms 0.02% 84.44% 80ms 0.54% MPI_Type_create_hindexed 31ms 0.21% 84.65% 79ms 0.53% __libc_calloc 46ms 0.31% 84.96% 78ms 0.52% TimeStepper::AdvanceOneTimeStep 57ms 0.38% 85.34% 77ms 0.52% AbstractParameterisedSystem::GetAnyVariable 40ms 0.27% 85.61% 76ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 24ms 0.16% 85.77% 76ms 0.51% H5S_select_iter_next