File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116284ms, 91.32% of 127342ms total Dropped 1167 nodes (cum <= 636.71ms) flat flat% sum% cum cum% 0 0% 0% 127326ms 100% __libc_start_call_main 0 0% 0% 127326ms 100% __libc_start_main_impl 0 0% 0% 127326ms 100% _start 0 0% 0% 127323ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127323ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127323ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127323ms 100% main 0 0% 0% 127283ms 100% AbstractConvergenceTester::Converge 0 0% 0% 127283ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127283ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127283ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127283ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127283ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 7ms 0.0055% 0.0055% 126091ms 99.02% AbstractCardiacProblem::Solve 9ms 0.0071% 0.013% 125160ms 98.29% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0039% 0.016% 68624ms 53.89% LinearSystem::Solve 3ms 0.0024% 0.019% 68121ms 53.49% KSPSolve 14ms 0.011% 0.03% 68120ms 53.49% KSPSolve_Private 18ms 0.014% 0.044% 67758ms 53.21% KSPSolve_SYMMLQ 462ms 0.36% 0.41% 47277ms 37.13% AbstractCardiacTissue::SolveCellSystems 4ms 0.0031% 0.41% 39298ms 30.86% PCApply 6ms 0.0047% 0.41% 39282ms 30.85% PCApply_BJacobi_Singleblock 1050ms 0.82% 1.24% 37045ms 29.09% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 1.24% 36883ms 28.96% KSPSolve_PREONLY (partial-inline) 3ms 0.0024% 1.24% 35696ms 28.03% PCApply_ICC 5ms 0.0039% 1.25% 35693ms 28.03% MatSolve 35281ms 27.71% 28.95% 35688ms 28.03% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0031% 28.95% 33641ms 26.42% KSP_PCApply.lto_priv.18 7698ms 6.05% 35.00% 32646ms 25.64% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 2ms 0.0016% 35.00% 23044ms 18.10% MatMult 250ms 0.2% 35.20% 23042ms 18.09% MatMult_SeqAIJ (partial-inline) 22513ms 17.68% 52.88% 23041ms 18.09% MatMult_SeqAIJ_Inode (inline) 2320ms 1.82% 54.70% 16814ms 13.20% CardiacNewtonSolver::Solve 5452ms 4.28% 58.98% 10000ms 7.85% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1461ms 1.15% 60.13% 9707ms 7.62% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 237ms 0.19% 60.31% 8901ms 6.99% AbstractCardiacTissue::UpdateCaches (inline) 1749ms 1.37% 61.69% 8266ms 6.49% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1257ms 0.99% 62.67% 8110ms 6.37% BidomainSolver::SetupLinearSystem 7956ms 6.25% 68.92% 7956ms 6.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1ms 0.00079% 68.92% 7508ms 5.90% KSP_PCApply (partial-inline) 9ms 0.0071% 68.93% 6984ms 5.48% KSPConvergedDefault 4276ms 3.36% 72.29% 4379ms 3.44% __ieee754_log_fma 0 0% 72.29% 4012ms 3.15% boost::numeric::ublas::norm_inf (inline) 2830ms 2.22% 74.51% 4012ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.51% 4012ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.51% 4012ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3422ms 2.69% 77.20% 3422ms 2.69% ddot_ 8ms 0.0063% 77.20% 3223ms 2.53% MatNullSpaceRemove 2036ms 1.60% 78.80% 3144ms 2.47% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 24ms 0.019% 78.82% 3091ms 2.43% std::pow (inline) 426ms 0.33% 79.16% 3051ms 2.40% __pow 2750ms 2.16% 81.31% 2750ms 2.16% __memcpy_avx_unaligned_erms 5ms 0.0039% 81.32% 2743ms 2.15% VecDot 1ms 0.00079% 81.32% 2738ms 2.15% VecDot_Seq 1ms 0.00079% 81.32% 2737ms 2.15% VecXDot_Seq_Private.constprop.0 0 0% 81.32% 2710ms 2.13% PetscMemcpy (inline) 362ms 0.28% 81.60% 2591ms 2.03% __ieee754_pow_fma 33ms 0.026% 81.63% 2349ms 1.84% VecCopy 1ms 0.00079% 81.63% 2310ms 1.81% VecCopy_Seq (partial-inline) 17ms 0.013% 81.64% 2109ms 1.66% VecAXPY 5ms 0.0039% 81.65% 2092ms 1.64% VecAXPY_Seq 2074ms 1.63% 83.28% 2074ms 1.63% daxpy_ 2ms 0.0016% 83.28% 2006ms 1.58% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00079% 83.28% 1984ms 1.56% VecMDot 13ms 0.01% 83.29% 1983ms 1.56% VecMXDot_Private 1962ms 1.54% 84.83% 1968ms 1.55% VecMDot_Seq 20ms 0.016% 84.85% 1683ms 1.32% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1500ms 1.18% 86.02% 1541ms 1.21% exp_inline (inline) 0 0% 86.02% 1393ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 9ms 0.0071% 86.03% 1231ms 0.97% VecMAXPY 1219ms 0.96% 86.99% 1222ms 0.96% VecMAXPY_Seq 0 0% 86.99% 1176ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.99% 1176ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.99% 1176ms 0.92% boost_numeric_ublas_abs (inline) 1176ms 0.92% 87.91% 1176ms 0.92% std::abs (inline) 5ms 0.0039% 87.92% 1094ms 0.86% boost::numeric::ublas::matrix_assign (inline) 239ms 0.19% 88.10% 1088ms 0.85% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.10% 1027ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.10% 1026ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.10% 1026ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 677ms 0.53% 88.64% 1008ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0016% 88.64% 980ms 0.77% VecNorm 0 0% 88.64% 976ms 0.77% VecNorm_Seq 964ms 0.76% 89.39% 964ms 0.76% [libchaste_heart.so] 1ms 0.00079% 89.39% 906ms 0.71% Element::Element 1ms 0.00079% 89.40% 892ms 0.7% AbstractTetrahedralElement::CalculateJacobian 6ms 0.0047% 89.40% 863ms 0.68% BidomainAssembler::ComputeMatrixTerm 3ms 0.0024% 89.40% 856ms 0.67% BidomainProblem::WriteOneStep 0 0% 89.40% 847ms 0.67% AbstractTetrahedralElement::AbstractTetrahedralElement 9ms 0.0071% 89.41% 833ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0039% 89.41% 826ms 0.65% VecScale 3ms 0.0024% 89.42% 821ms 0.64% VecScale_Seq 816ms 0.64% 90.06% 816ms 0.64% dscal_ 1ms 0.00079% 90.06% 788ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 242ms 0.19% 90.25% 785ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 710ms 0.56% 90.81% 710ms 0.56% __memset_avx2_unaligned_erms 5ms 0.0039% 90.81% 705ms 0.55% VecDuplicate 0 0% 90.81% 696ms 0.55% PetscMemzero (inline) 0 0% 90.81% 671ms 0.53% VecNorm_MPI 0 0% 90.81% 671ms 0.53% VecNorm_MPI_Default.constprop.0 646ms 0.51% 91.32% 646ms 0.51% log_inline (inline)