File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12811ms, 85.81% of 14929ms total Dropped 731 nodes (cum <= 74.64ms) flat flat% sum% cum cum% 0 0% 0% 14920ms 99.94% __libc_start_call_main 0 0% 0% 14920ms 99.94% __libc_start_main_impl 0 0% 0% 14920ms 99.94% _start 0 0% 0% 14917ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14917ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14917ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14917ms 99.92% main 0 0% 0% 14876ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14876ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14876ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14853ms 99.49% AbstractCardiacProblem::Solve 1ms 0.0067% 0.02% 11408ms 76.42% AbstractDynamicLinearPdeSolver::Solve 66ms 0.44% 0.46% 9009ms 60.35% AbstractCardiacTissue::SolveCellSystems 91ms 0.61% 1.07% 5514ms 36.93% AbstractCardiacCell::ComputeExceptVoltage 125ms 0.84% 1.91% 4838ms 32.41% AbstractOneStepIvpOdeSolver::InternalSolve 179ms 1.20% 3.11% 4124ms 27.62% EulerIvpOdeSolver::CalculateNextYValue 925ms 6.20% 9.30% 3899ms 26.12% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1756ms 11.76% 21.07% 3497ms 23.42% __GI___exp 0 0% 21.07% 3390ms 22.71% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.07% 3256ms 21.81% Hdf5DataWriter::PutVector 3ms 0.02% 21.09% 3233ms 21.66% H5Dwrite 6ms 0.04% 21.13% 3205ms 21.47% H5D__write 127ms 0.85% 21.98% 2804ms 18.78% AbstractCardiacTissue::UpdateCaches (inline) 751ms 5.03% 27.01% 2587ms 17.33% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.01% 1947ms 13.04% H5D__chunk_collective_write 19ms 0.13% 27.14% 1947ms 13.04% H5F_set_coll_metadata_reads 11ms 0.074% 27.22% 1688ms 11.31% H5FD_s3comms_uriencode 1326ms 8.88% 36.10% 1658ms 11.11% __ieee754_exp_fma 5ms 0.033% 36.13% 1559ms 10.44% LinearSystem::Solve 1ms 0.0067% 36.14% 1410ms 9.44% KSPSolve 1ms 0.0067% 36.14% 1410ms 9.44% KSPSolve_Private 3ms 0.02% 36.16% 1398ms 9.36% KSPSolve_CG 4ms 0.027% 36.19% 1316ms 8.82% H5F_block_write 53ms 0.36% 36.55% 1315ms 8.81% 3ms 0.02% 36.57% 1312ms 8.79% H5PB_write 1ms 0.0067% 36.57% 1309ms 8.77% H5F__accum_write 3ms 0.02% 36.59% 1308ms 8.76% H5FD_write 4ms 0.027% 36.62% 1241ms 8.31% H5D__mpio_select_write 6ms 0.04% 36.66% 1160ms 7.77% H5D__chunk_cacheable 1ms 0.0067% 36.67% 1126ms 7.54% PMPI_File_write_at_all 1097ms 7.35% 44.02% 1098ms 7.35% __GI_pwritev64 334ms 2.24% 46.25% 1018ms 6.82% H5S_select_iterate 4ms 0.027% 46.28% 984ms 6.59% std::pow (inline) 95ms 0.64% 46.92% 980ms 6.56% __pow 67ms 0.45% 47.36% 885ms 5.93% __ieee754_pow_fma 365ms 2.44% 49.81% 819ms 5.49% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 49.82% 743ms 4.98% PCApply 1ms 0.0067% 49.82% 740ms 4.96% PCApply_BJacobi_Singleblock 1ms 0.0067% 49.83% 718ms 4.81% KSPSolve_PREONLY 1ms 0.0067% 49.84% 715ms 4.79% MatSolve 0 0% 49.84% 715ms 4.79% PCApply_ICC 706ms 4.73% 54.56% 714ms 4.78% MatSolve_SeqSBAIJ_1_NaturalOrdering 88ms 0.59% 55.15% 695ms 4.66% H5D__chunk_set_sizes 5ms 0.033% 55.19% 620ms 4.15% MatMult 611ms 4.09% 59.28% 615ms 4.12% MatMult_SeqAIJ 2ms 0.013% 59.29% 512ms 3.43% KSP_PCApply.lto_priv.7 65ms 0.44% 59.73% 481ms 3.22% H5S_mpio_space_type 219ms 1.47% 61.20% 461ms 3.09% CellLuoRudy1991FromCellML::VerifyStateVariables 456ms 3.05% 64.25% 456ms 3.05% log_inline (inline) 313ms 2.10% 66.35% 326ms 2.18% exp_inline (inline) 2ms 0.013% 66.36% 319ms 2.14% KSPConvergedDefault 227ms 1.52% 67.88% 290ms 1.94% top12 (inline) 128ms 0.86% 68.74% 281ms 1.88% TimeStepper::TimeStepper 247ms 1.65% 70.39% 247ms 1.65% [libchaste_heart.so] 0 0% 70.39% 238ms 1.59% KSP_PCApply 55ms 0.37% 70.76% 231ms 1.55% __GI___libc_malloc 11ms 0.074% 70.84% 227ms 1.52% H5VM_chunk_index 161ms 1.08% 71.91% 209ms 1.40% _int_malloc 14ms 0.094% 72.01% 191ms 1.28% ompi_datatype_destroy 6ms 0.04% 72.05% 188ms 1.26% MPI_Type_free 33ms 0.22% 72.27% 177ms 1.19% __GI___libc_free 127ms 0.85% 73.12% 172ms 1.15% AbstractOneStepIvpOdeSolver::Solve 11ms 0.074% 73.19% 170ms 1.14% ompi_datatype_create 44ms 0.29% 73.49% 168ms 1.13% AbstractCardiacCell::SetVoltage (partial-inline) 166ms 1.11% 74.60% 166ms 1.11% ddot_ 39ms 0.26% 74.86% 161ms 1.08% H5S_set_version 42ms 0.28% 75.14% 159ms 1.07% ompi_datatype_release_args 4ms 0.027% 75.17% 159ms 1.07% ompi_info_register_framework_params 154ms 1.03% 76.20% 154ms 1.03% asuint64 (inline) 60ms 0.4% 76.60% 144ms 0.96% _int_free 141ms 0.94% 77.55% 141ms 0.94% TimeStepper::CalculateNextTime 135ms 0.9% 78.45% 135ms 0.9% __ieee754_log_fma 0 0% 78.45% 134ms 0.9% Hdf5DataWriter::PutUnlimitedVariable 4ms 0.027% 78.48% 133ms 0.89% VecNorm 131ms 0.88% 79.36% 131ms 0.88% __memcpy_avx_unaligned_erms 108ms 0.72% 80.08% 130ms 0.87% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 128ms 0.86% 80.94% 128ms 0.86% H5VM_chunk_index_scaled 53ms 0.36% 81.29% 126ms 0.84% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 1ms 0.0067% 81.30% 124ms 0.83% PMPI_File_set_view 2ms 0.013% 81.31% 123ms 0.82% VecNorm_Seq 98ms 0.66% 81.97% 122ms 0.82% AbstractParameterisedSystem::GetAnyVariable 42ms 0.28% 82.25% 122ms 0.82% H5VM_array_calc 56ms 0.38% 82.62% 118ms 0.79% H5S_hyper_add_span_element 3ms 0.02% 82.64% 114ms 0.76% PMPI_Type_create_resized 0 0% 82.64% 109ms 0.73% VecDuplicate 2ms 0.013% 82.66% 109ms 0.73% VecDuplicate_MPI 85ms 0.57% 83.23% 106ms 0.71% AbstractParameterisedSystem::SetAnyVariable 30ms 0.2% 83.43% 101ms 0.68% AbstractCardiacCell::GetVoltage (partial-inline) 3ms 0.02% 83.45% 98ms 0.66% ompi_datatype_duplicate 90ms 0.6% 84.05% 90ms 0.6% H5VM_array_offset_pre 1ms 0.0067% 84.06% 87ms 0.58% VecTDot 0 0% 84.06% 85ms 0.57% VecTDot_Seq 1ms 0.0067% 84.06% 85ms 0.57% VecXDot_Seq_Private.constprop.0 83ms 0.56% 84.62% 83ms 0.56% [libm.so.6] 0 0% 84.62% 83ms 0.56% std::vector::_M_assign_aux (inline) 0 0% 84.62% 83ms 0.56% std::vector::assign (inline) 5ms 0.033% 84.65% 78ms 0.52% std::__copy_move::__copy_m (inline) 0 0% 84.65% 78ms 0.52% std::__copy_move_a (inline) 0 0% 84.65% 78ms 0.52% std::__copy_move_a1 (inline) 0 0% 84.65% 78ms 0.52% std::__copy_move_a2 (inline) 0 0% 84.65% 78ms 0.52% std::copy (inline) 77ms 0.52% 85.17% 78ms 0.52% std::vector::operator[] (inline) 20ms 0.13% 85.30% 77ms 0.52% __libc_calloc 76ms 0.51% 85.81% 76ms 0.51% std::isinf (inline)