File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 342ms, 89.76% of 381ms total Dropped 156 nodes (cum <= 1.91ms) flat flat% sum% cum cum% 0 0% 0% 374ms 98.16% __libc_start_call_main 0 0% 0% 374ms 98.16% __libc_start_main_impl 0 0% 0% 374ms 98.16% _start 0 0% 0% 372ms 97.64% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 372ms 97.64% CxxTest::TestRunner::runAllTests 0 0% 0% 372ms 97.64% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 372ms 97.64% main 0 0% 0% 334ms 87.66% CxxTest::RealTestDescription::run 0 0% 0% 334ms 87.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 334ms 87.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 334ms 87.66% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 334ms 87.66% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 331ms 86.88% AbstractCardiacProblem::Solve 0 0% 0% 331ms 86.88% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 309ms 81.10% KSPSolve 0 0% 0% 309ms 81.10% KSPSolve_Private 0 0% 0% 309ms 81.10% LinearSystem::Solve 0 0% 0% 308ms 80.84% KSPSolve_CG 0 0% 0% 178ms 46.72% KSP_PCApply.lto_priv.7 1ms 0.26% 0.26% 174ms 45.67% PCApply 0 0% 0.26% 172ms 45.14% PCApply_BJacobi_Singleblock 0 0% 0.26% 153ms 40.16% KSPSolve_PREONLY (partial-inline) 0 0% 0.26% 143ms 37.53% MatSolve 141ms 37.01% 37.27% 143ms 37.53% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 37.27% 143ms 37.53% PCApply_ICC 52ms 13.65% 50.92% 52ms 13.65% ddot_ 0 0% 50.92% 49ms 12.86% MatMult 0 0% 50.92% 49ms 12.86% MatMult_SeqAIJ 49ms 12.86% 63.78% 49ms 12.86% MatMult_SeqAIJ_Inode (inline) 0 0% 63.78% 40ms 10.50% VecTDot 0 0% 63.78% 39ms 10.24% VecTDot_Seq 0 0% 63.78% 39ms 10.24% VecXDot_Seq_Private.constprop.0 0 0% 63.78% 35ms 9.19% CxxTest::RealWorldDescription::setUp 0 0% 63.78% 35ms 9.19% PetscSetup::setUpWorld 0 0% 63.78% 35ms 9.19% PetscSetupUtils::CommonSetup 0 0% 63.78% 35ms 9.19% PetscSetupUtils::InitialisePetsc 0 0% 63.78% 34ms 8.92% PMPI_Init_thread 0 0% 63.78% 34ms 8.92% PetscInitialize 0 0% 63.78% 34ms 8.92% ompi_mpi_init 0 0% 63.78% 29ms 7.61% 0 0% 63.78% 28ms 7.35% MatNullSpaceRemove 0 0% 63.78% 22ms 5.77% orte_init 0 0% 63.78% 20ms 5.25% AbstractCardiacTissue::SolveCellSystems 0 0% 63.78% 20ms 5.25% VecMDot 1ms 0.26% 64.04% 20ms 5.25% VecMXDot_Private 19ms 4.99% 69.03% 19ms 4.99% VecMDot_Seq 0 0% 69.03% 16ms 4.20% KSP_PCApply (partial-inline) 0 0% 69.03% 15ms 3.94% hwloc_topology_load 0 0% 69.03% 15ms 3.94% mca_base_framework_components_register 0 0% 69.03% 15ms 3.94% mca_base_framework_open 0 0% 69.03% 15ms 3.94% mca_base_framework_register 1ms 0.26% 69.29% 14ms 3.67% VecNorm 0 0% 69.29% 14ms 3.67% __GI__dl_catch_exception 0 0% 69.29% 14ms 3.67% _dl_catch_error 0 0% 69.29% 14ms 3.67% _dlerror_run 1ms 0.26% 69.55% 14ms 3.67% hwloc_linux_get_tid_last_cpu_location 0 0% 69.55% 13ms 3.41% VecNorm_Seq 0 0% 69.55% 13ms 3.41% ___dlopen 0 0% 69.55% 13ms 3.41% _dl_open 0 0% 69.55% 13ms 3.41% dl_open_worker 0 0% 69.55% 13ms 3.41% dlopen_doit 0 0% 69.55% 13ms 3.41% dlopen_implementation (inline) 0 0% 69.55% 13ms 3.41% opal_stackframe_output 0 0% 69.55% 12ms 3.15% AbstractCardiacCell::ComputeExceptVoltage 0 0% 69.55% 12ms 3.15% mca_base_component_find 0 0% 69.55% 12ms 3.15% mca_base_component_repository_open 1ms 0.26% 69.82% 11ms 2.89% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 69.82% 11ms 2.89% _dl_init 0 0% 69.82% 11ms 2.89% call_init (inline) 0 0% 69.82% 10ms 2.62% VecDuplicate 0 0% 69.82% 10ms 2.62% VecDuplicate_Seq 0 0% 69.82% 9ms 2.36% KSPConvergedDefault 2ms 0.52% 70.34% 8ms 2.10% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.26% 70.60% 8ms 2.10% EulerIvpOdeSolver::CalculateNextYValue 0 0% 70.60% 8ms 2.10% VecAXPY 0 0% 70.60% 8ms 2.10% VecAXPY_Seq 0 0% 70.60% 8ms 2.10% VecAYPX 8ms 2.10% 72.70% 8ms 2.10% VecAYPX_Seq 0 0% 72.70% 8ms 2.10% VecMAXPY 7ms 1.84% 74.54% 8ms 2.10% VecMAXPY_Seq 8ms 2.10% 76.64% 8ms 2.10% daxpy_ 0 0% 76.64% 8ms 2.10% dl_open_worker_begin 0 0% 76.64% 7ms 1.84% VecCreate 1ms 0.26% 76.90% 6ms 1.57% CellLuoRudy1991FromCellML::EvaluateYDerivatives 2ms 0.52% 77.43% 6ms 1.57% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.52% 77.95% 6ms 1.57% PetscMallocA 0 0% 77.95% 6ms 1.57% __GI___libc_malloc 0 0% 77.95% 6ms 1.57% _dl_start_user 3ms 0.79% 78.74% 6ms 1.57% _int_malloc 1ms 0.26% 79.00% 6ms 1.57% boost::serialization::singleton::get_instance (partial-inline) 0 0% 79.00% 6ms 1.57% mca_base_framework_components_open 0 0% 79.00% 6ms 1.57% mca_topo_base_dist_graph_neighbors_count 5ms 1.31% 80.31% 5ms 1.31% __GI___clock_nanosleep 2ms 0.52% 80.84% 5ms 1.31% __GI___exp 5ms 1.31% 82.15% 5ms 1.31% __GI___libc_read 0 0% 82.15% 5ms 1.31% __GI___nanosleep 0 0% 82.15% 5ms 1.31% _dl_open_relocate_one_object (inline) 0 0% 82.15% 5ms 1.31% _dl_relocate_object 0 0% 82.15% 5ms 1.31% opal_hwloc_base_get_topology 0 0% 82.15% 5ms 1.31% orte_ess_base_proc_binding 0 0% 82.15% 5ms 1.31% usleep 0 0% 82.15% 4ms 1.05% PetscMallocAlign (partial-inline) 0 0% 82.15% 4ms 1.05% PetscMemzero (inline) 1ms 0.26% 82.41% 4ms 1.05% __ieee754_pow_fma 4ms 1.05% 83.46% 4ms 1.05% __memset_avx512_unaligned_erms 0 0% 83.46% 4ms 1.05% __pow 0 0% 83.46% 4ms 1.05% _dl_lookup_symbol_x 0 0% 83.46% 4ms 1.05% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 3ms 0.79% 84.25% 4ms 1.05% do_lookup_x 0 0% 84.25% 4ms 1.05% std::pow (inline) 0 0% 84.25% 3ms 0.79% AbstractCardiacProblem::Initialise 0 0% 84.25% 3ms 0.79% CxxTest::RealWorldDescription::tearDown 0 0% 84.25% 3ms 0.79% PetscFinalize 0 0% 84.25% 3ms 0.79% PetscHeaderCreate_Private 0 0% 84.25% 3ms 0.79% PetscMemcpy (inline) 0 0% 84.25% 3ms 0.79% PetscSetup::tearDownWorld 0 0% 84.25% 3ms 0.79% PetscSetupUtils::CommonFinalize 0 0% 84.25% 3ms 0.79% VecCreate_Seq 0 0% 84.25% 3ms 0.79% VecSetType 0 0% 84.25% 3ms 0.79% [hwloc_pci.so] 1ms 0.26% 84.51% 3ms 0.79% [libpciaccess.so.0.11.1] 3ms 0.79% 85.30% 3ms 0.79% __ieee754_exp_fma 3ms 0.79% 86.09% 3ms 0.79% __memcpy_avx512_unaligned_erms 1ms 0.26% 86.35% 3ms 0.79% _dl_fixup 1ms 0.26% 86.61% 3ms 0.79% _dl_map_object 0 0% 86.61% 3ms 0.79% _dl_runtime_resolve_xsavec 0 0% 86.61% 3ms 0.79% elf_dynamic_do_Rela (inline) 0 0% 86.61% 3ms 0.79% elf_machine_rela (inline) 0 0% 86.61% 3ms 0.79% mca_base_component_var_register 0 0% 86.61% 3ms 0.79% mca_base_var_group_register 0 0% 86.61% 3ms 0.79% mca_base_var_register 0 0% 86.61% 3ms 0.79% ompi_mpi_finalize 0 0% 86.61% 3ms 0.79% pci_get_strings 0 0% 86.61% 3ms 0.79% resolve_map (inline) 1ms 0.26% 86.88% 2ms 0.52% BidomainSolver::SetupLinearSystem 0 0% 86.88% 2ms 0.52% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 86.88% 2ms 0.52% MPI_Comm_set_attr 1ms 0.26% 87.14% 2ms 0.52% TimeStepper::TimeStepper 0 0% 87.14% 2ms 0.52% VecDestroy 1ms 0.26% 87.40% 2ms 0.52% VecSet 0 0% 87.40% 2ms 0.52% XOpenDisplay 0 0% 87.40% 2ms 0.52% [hwloc_gl.so] 0 0% 87.40% 2ms 0.52% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 87.40% 2ms 0.52% _XConnectXCB 0 0% 87.40% 2ms 0.52% __GI_exit 2ms 0.52% 87.93% 2ms 0.52% __GI_mprotect 0 0% 87.93% 2ms 0.52% __cxa_finalize 0 0% 87.93% 2ms 0.52% __run_exit_handlers 2ms 0.52% 88.45% 2ms 0.52% __strlen_evex 0 0% 88.45% 2ms 0.52% _dl_call_fini 0 0% 88.45% 2ms 0.52% _dl_fini 0 0% 88.45% 2ms 0.52% _dl_map_object_deps 0 0% 88.45% 2ms 0.52% _dl_protect_relro (inline) 0 0% 88.45% 2ms 0.52% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.45% 2ms 0.52% boost::serialization::singleton::get_mutable_instance (inline) 1ms 0.26% 88.71% 2ms 0.52% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 88.71% 2ms 0.52% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.71% 2ms 0.52% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 2ms 0.52% 89.24% 2ms 0.52% log_inline (inline) 0 0% 89.24% 2ms 0.52% mca_base_var_enum_create_flag 0 0% 89.24% 2ms 0.52% ompi_attr_set_c 0 0% 89.24% 2ms 0.52% openaux 0 0% 89.24% 2ms 0.52% operator new 0 0% 89.24% 2ms 0.52% std::__new_allocator::allocate (inline) 0 0% 89.24% 2ms 0.52% std::allocator_traits::allocate (inline) 2ms 0.52% 89.76% 2ms 0.52% strcmp 0 0% 89.76% 2ms 0.52% xcb_connect_to_display_with_auth_info