File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 93627ms, 91.75% of 102042ms total Dropped 1140 nodes (cum <= 510.21ms) flat flat% sum% cum cum% 0 0% 0% 102031ms 100% __libc_start_call_main 0 0% 0% 102031ms 100% __libc_start_main_impl 0 0% 0% 102031ms 100% _start 0 0% 0% 102029ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 102029ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 102029ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 102029ms 100% main 0 0% 0% 101985ms 99.94% AbstractConvergenceTester::Converge 0 0% 0% 101985ms 99.94% CxxTest::RealTestDescription::run 0 0% 0% 101985ms 99.94% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 101985ms 99.94% CxxTest::TestRunner::runTest (inline) 0 0% 0% 101985ms 99.94% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 101985ms 99.94% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0039% 0.0039% 101010ms 98.99% AbstractCardiacProblem::Solve 12ms 0.012% 0.016% 100197ms 98.19% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0049% 0.021% 56754ms 55.62% LinearSystem::Solve 0 0% 0.021% 56342ms 55.21% KSPSolve 16ms 0.016% 0.036% 56342ms 55.21% KSPSolve_Private 11ms 0.011% 0.047% 56044ms 54.92% KSPSolve_SYMMLQ 293ms 0.29% 0.33% 35945ms 35.23% AbstractCardiacTissue::SolveCellSystems 2ms 0.002% 0.34% 31255ms 30.63% PCApply 5ms 0.0049% 0.34% 31240ms 30.61% PCApply_BJacobi_Singleblock 0 0% 0.34% 29484ms 28.89% KSPSolve_PREONLY (partial-inline) 2ms 0.002% 0.34% 28663ms 28.09% PCApply_ICC 6ms 0.0059% 0.35% 28661ms 28.09% MatSolve 28303ms 27.74% 28.09% 28655ms 28.08% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 782ms 0.77% 28.85% 28119ms 27.56% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0029% 28.85% 26608ms 26.08% KSP_PCApply.lto_priv.18 6061ms 5.94% 34.79% 24728ms 24.23% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 10ms 0.0098% 34.80% 20184ms 19.78% MatMult 228ms 0.22% 35.03% 20174ms 19.77% MatMult_SeqAIJ (partial-inline) 19824ms 19.43% 54.46% 20171ms 19.77% MatMult_SeqAIJ_Inode (inline) 1697ms 1.66% 56.12% 12928ms 12.67% CardiacNewtonSolver::Solve 4210ms 4.13% 60.24% 7681ms 7.53% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 168ms 0.16% 60.41% 6878ms 6.74% AbstractCardiacTissue::UpdateCaches (inline) 1103ms 1.08% 61.49% 6715ms 6.58% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 911ms 0.89% 62.38% 6579ms 6.45% BidomainSolver::SetupLinearSystem 1340ms 1.31% 63.70% 6438ms 6.31% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 0 0% 63.70% 6170ms 6.05% KSP_PCApply (partial-inline) 6ms 0.0059% 63.70% 5805ms 5.69% KSPConvergedDefault 5377ms 5.27% 68.97% 5377ms 5.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3207ms 3.14% 72.11% 3286ms 3.22% __ieee754_log_fma 0 0% 72.11% 3182ms 3.12% boost::numeric::ublas::norm_inf (inline) 2228ms 2.18% 74.30% 3182ms 3.12% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.30% 3182ms 3.12% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.30% 3182ms 3.12% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0069% 74.30% 2622ms 2.57% MatNullSpaceRemove 1606ms 1.57% 75.88% 2465ms 2.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2440ms 2.39% 78.27% 2440ms 2.39% ddot_ 24ms 0.024% 78.29% 2407ms 2.36% std::pow (inline) 282ms 0.28% 78.57% 2370ms 2.32% __pow 2328ms 2.28% 80.85% 2328ms 2.28% __memcpy_avx512_unaligned_erms 0 0% 80.85% 2300ms 2.25% PetscMemcpy (inline) 267ms 0.26% 81.11% 2059ms 2.02% __ieee754_pow_fma 9ms 0.0088% 81.12% 1987ms 1.95% VecAXPY 5ms 0.0049% 81.13% 1980ms 1.94% VecDot 2ms 0.002% 81.13% 1978ms 1.94% VecAXPY_Seq 0 0% 81.13% 1975ms 1.94% VecDot_Seq 0 0% 81.13% 1975ms 1.94% VecXDot_Seq_Private.constprop.0 16ms 0.016% 81.14% 1970ms 1.93% VecCopy 1963ms 1.92% 83.07% 1963ms 1.92% daxpy_ 3ms 0.0029% 83.07% 1952ms 1.91% VecCopy_Seq (partial-inline) 2ms 0.002% 83.07% 1658ms 1.62% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0029% 83.07% 1644ms 1.61% VecMDot 5ms 0.0049% 83.08% 1641ms 1.61% VecMXDot_Private 1630ms 1.60% 84.68% 1634ms 1.60% VecMDot_Seq 22ms 0.022% 84.70% 1399ms 1.37% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1178ms 1.15% 85.85% 1233ms 1.21% exp_inline (inline) 0 0% 85.85% 1173ms 1.15% AbstractFeAssemblerInterface::AssembleMatrix (inline) 8ms 0.0078% 85.86% 971ms 0.95% VecMAXPY 958ms 0.94% 86.80% 963ms 0.94% VecMAXPY_Seq 0 0% 86.80% 952ms 0.93% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.80% 952ms 0.93% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.80% 952ms 0.93% boost_numeric_ublas_abs (inline) 952ms 0.93% 87.73% 952ms 0.93% std::abs (inline) 5ms 0.0049% 87.74% 931ms 0.91% boost::numeric::ublas::matrix_assign (inline) 197ms 0.19% 87.93% 922ms 0.9% boost::numeric::ublas::indexing_matrix_assign 534ms 0.52% 88.45% 827ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.45% 827ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.45% 826ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.002% 88.46% 826ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 790ms 0.77% 89.23% 790ms 0.77% [libchaste_heart.so] 3ms 0.0029% 89.23% 752ms 0.74% BidomainAssembler::ComputeMatrixTerm 4ms 0.0039% 89.24% 745ms 0.73% Element::Element 0 0% 89.24% 744ms 0.73% BidomainProblem::WriteOneStep 3ms 0.0029% 89.24% 728ms 0.71% AbstractTetrahedralElement::CalculateJacobian 8ms 0.0078% 89.25% 721ms 0.71% boost::numeric::ublas::c_matrix::c_matrix (inline) 8ms 0.0078% 89.26% 720ms 0.71% VecScale 2ms 0.002% 89.26% 712ms 0.7% VecScale_Seq 709ms 0.69% 89.95% 709ms 0.69% dscal_ 1ms 0.00098% 89.95% 704ms 0.69% VecNorm 3ms 0.0029% 89.96% 693ms 0.68% VecNorm_Seq 2ms 0.002% 89.96% 692ms 0.68% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.002% 89.96% 624ms 0.61% AbstractBidomainSolver::FinaliseLinearSystem 189ms 0.19% 90.15% 622ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 560ms 0.55% 90.69% 560ms 0.55% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 549ms 0.54% 91.23% 549ms 0.54% __memset_avx512_unaligned_erms 2ms 0.002% 91.23% 542ms 0.53% H5Dwrite 0 0% 91.23% 537ms 0.53% PetscMemzero (inline) 527ms 0.52% 91.75% 527ms 0.52% log_inline (inline) 3ms 0.0029% 91.75% 525ms 0.51% H5D__write