File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109284ms, 91.88% of 118943ms total Dropped 1126 nodes (cum <= 594.72ms) flat flat% sum% cum cum% 0 0% 0% 118926ms 100% __libc_start_call_main 0 0% 0% 118926ms 100% __libc_start_main_impl 0 0% 0% 118926ms 100% _start 0 0% 0% 118923ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118923ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118923ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118923ms 100% main 0 0% 0% 118888ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118888ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118888ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118888ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118888ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 118887ms 100% AbstractConvergenceTester::Converge 1ms 0.00084% 0.00084% 117639ms 98.90% AbstractCardiacProblem::Solve 12ms 0.01% 0.011% 116900ms 98.28% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0034% 0.014% 65268ms 54.87% LinearSystem::Solve 0 0% 0.014% 64821ms 54.50% KSPSolve 13ms 0.011% 0.025% 64821ms 54.50% KSPSolve_Private 15ms 0.013% 0.038% 64430ms 54.17% KSPSolve_SYMMLQ 213ms 0.18% 0.22% 42745ms 35.94% AbstractCardiacTissue::SolveCellSystems 7ms 0.0059% 0.22% 36732ms 30.88% PCApply 0 0% 0.22% 36718ms 30.87% PCApply_BJacobi_Singleblock 3ms 0.0025% 0.23% 34394ms 28.92% KSPSolve_PREONLY (partial-inline) 1ms 0.00084% 0.23% 33249ms 27.95% PCApply_ICC 5ms 0.0042% 0.23% 33248ms 27.95% MatSolve 32773ms 27.55% 27.78% 33243ms 27.95% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1456ms 1.22% 29.01% 32874ms 27.64% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00084% 29.01% 31691ms 26.64% KSP_PCApply.lto_priv.18 6769ms 5.69% 34.70% 28435ms 23.91% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0067% 34.71% 22167ms 18.64% MatMult 229ms 0.19% 34.90% 22159ms 18.63% MatMult_SeqAIJ (partial-inline) 21646ms 18.20% 53.10% 22159ms 18.63% MatMult_SeqAIJ_Inode (inline) 1967ms 1.65% 54.75% 14827ms 12.47% CardiacNewtonSolver::Solve 291ms 0.24% 55.00% 8998ms 7.56% AbstractCardiacTissue::UpdateCaches (inline) 4463ms 3.75% 58.75% 8624ms 7.25% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1927ms 1.62% 60.37% 8531ms 7.17% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1144ms 0.96% 61.33% 7848ms 6.60% BidomainSolver::SetupLinearSystem 1247ms 1.05% 62.38% 7431ms 6.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 62.38% 7070ms 5.94% KSP_PCApply (partial-inline) 8ms 0.0067% 62.39% 6467ms 5.44% KSPConvergedDefault 5947ms 5.00% 67.39% 5947ms 5.00% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3867ms 3.25% 70.64% 3897ms 3.28% __ieee754_log_fma 0 0% 70.64% 3869ms 3.25% boost::numeric::ublas::norm_inf (inline) 2596ms 2.18% 72.82% 3869ms 3.25% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.82% 3869ms 3.25% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.82% 3869ms 3.25% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0042% 72.82% 3276ms 2.75% MatNullSpaceRemove 31ms 0.026% 72.85% 3230ms 2.72% std::pow (inline) 396ms 0.33% 73.18% 3194ms 2.69% __pow 2905ms 2.44% 75.62% 2905ms 2.44% __memcpy_avx_unaligned_erms 0 0% 75.62% 2869ms 2.41% PetscMemcpy (inline) 1688ms 1.42% 77.04% 2811ms 2.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 382ms 0.32% 77.36% 2790ms 2.35% __ieee754_pow_fma 2769ms 2.33% 79.69% 2769ms 2.33% ddot_ 19ms 0.016% 79.71% 2425ms 2.04% VecCopy 4ms 0.0034% 79.71% 2404ms 2.02% VecCopy_Seq (partial-inline) 15ms 0.013% 79.72% 2323ms 1.95% VecAXPY 9ms 0.0076% 79.73% 2308ms 1.94% VecAXPY_Seq 2282ms 1.92% 81.65% 2282ms 1.92% daxpy_ 3ms 0.0025% 81.65% 2225ms 1.87% VecDot 0 0% 81.65% 2222ms 1.87% VecDot_Seq 1ms 0.00084% 81.65% 2222ms 1.87% VecXDot_Seq_Private.constprop.0 1ms 0.00084% 81.66% 2078ms 1.75% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00084% 81.66% 1902ms 1.60% VecMDot 13ms 0.011% 81.67% 1901ms 1.60% VecMXDot_Private 1875ms 1.58% 83.24% 1887ms 1.59% VecMDot_Seq 1652ms 1.39% 84.63% 1712ms 1.44% exp_inline (inline) 21ms 0.018% 84.65% 1692ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1437ms 1.21% 85.86% 1437ms 1.21% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 85.86% 1427ms 1.20% AbstractFeAssemblerInterface::AssembleMatrix (inline) 8ms 0.0067% 85.86% 1369ms 1.15% VecMAXPY 1360ms 1.14% 87.01% 1361ms 1.14% VecMAXPY_Seq 0 0% 87.01% 1186ms 1% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.01% 1186ms 1% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.01% 1186ms 1% boost_numeric_ublas_abs (inline) 1186ms 1% 88.01% 1186ms 1% std::abs (inline) 0 0% 88.01% 1102ms 0.93% CuboidMeshConstructor::Construct 0 0% 88.01% 1101ms 0.93% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0017% 88.01% 1101ms 0.93% DistributedTetrahedralMesh::ConstructCuboid 7ms 0.0059% 88.01% 1090ms 0.92% boost::numeric::ublas::matrix_assign (inline) 227ms 0.19% 88.20% 1076ms 0.9% boost::numeric::ublas::indexing_matrix_assign 1014ms 0.85% 89.06% 1014ms 0.85% __memset_avx2_unaligned_erms 730ms 0.61% 89.67% 1010ms 0.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.67% 1005ms 0.84% PetscMemzero (inline) 2ms 0.0017% 89.67% 990ms 0.83% Element::Element 3ms 0.0025% 89.67% 965ms 0.81% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.68% 927ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0017% 89.68% 889ms 0.75% VecDuplicate 875ms 0.74% 90.41% 875ms 0.74% [libchaste_heart.so] 2ms 0.0017% 90.41% 852ms 0.72% BidomainAssembler::ComputeMatrixTerm 6ms 0.005% 90.42% 835ms 0.7% VecScale 4ms 0.0034% 90.42% 829ms 0.7% VecScale_Seq 823ms 0.69% 91.12% 823ms 0.69% dscal_ 8ms 0.0067% 91.12% 815ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0017% 91.12% 789ms 0.66% VecNorm 1ms 0.00084% 91.12% 779ms 0.65% VecNorm_Seq 15ms 0.013% 91.14% 738ms 0.62% PetscMallocA 1ms 0.00084% 91.14% 736ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 227ms 0.19% 91.33% 733ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 4ms 0.0034% 91.33% 723ms 0.61% PetscMallocAlign (partial-inline) 0 0% 91.33% 682ms 0.57% BidomainProblem::WriteOneStep 0 0% 91.33% 651ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 651ms 0.55% 91.88% 651ms 0.55% log_inline (inline)