File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12903ms, 86.48% of 14921ms total Dropped 758 nodes (cum <= 74.61ms) flat flat% sum% cum cum% 0 0% 0% 14911ms 99.93% __libc_start_call_main 0 0% 0% 14911ms 99.93% __libc_start_main_impl 0 0% 0% 14911ms 99.93% _start 0 0% 0% 14908ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14908ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14908ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14908ms 99.91% main 0 0% 0% 14872ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14872ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14872ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14851ms 99.53% AbstractCardiacProblem::Solve 3ms 0.02% 0.034% 11413ms 76.49% AbstractDynamicLinearPdeSolver::Solve 72ms 0.48% 0.52% 9242ms 61.94% AbstractCardiacTissue::SolveCellSystems 156ms 1.05% 1.56% 5657ms 37.91% AbstractCardiacCell::ComputeExceptVoltage 184ms 1.23% 2.79% 4867ms 32.62% AbstractOneStepIvpOdeSolver::InternalSolve 189ms 1.27% 4.06% 4124ms 27.64% EulerIvpOdeSolver::CalculateNextYValue 942ms 6.31% 10.37% 3864ms 25.90% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1746ms 11.70% 22.08% 3517ms 23.57% __GI___exp 3ms 0.02% 22.10% 3370ms 22.59% MonodomainProblem::WriteOneStep 2ms 0.013% 22.11% 3222ms 21.59% Hdf5DataWriter::PutVector 2ms 0.013% 22.12% 3201ms 21.45% H5Dwrite 3ms 0.02% 22.14% 3163ms 21.20% H5D__write 105ms 0.7% 22.85% 2699ms 18.09% AbstractCardiacTissue::UpdateCaches (inline) 795ms 5.33% 28.18% 2555ms 17.12% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.18% 1828ms 12.25% H5D__chunk_collective_write 22ms 0.15% 28.32% 1828ms 12.25% H5F_set_coll_metadata_reads 1581ms 10.60% 38.92% 1723ms 11.55% __ieee754_exp_fma 17ms 0.11% 39.03% 1605ms 10.76% H5FD_s3comms_uriencode 1ms 0.0067% 39.04% 1399ms 9.38% LinearSystem::Solve 0 0% 39.04% 1273ms 8.53% KSPSolve 3ms 0.02% 39.06% 1273ms 8.53% KSPSolve_Private 6ms 0.04% 39.10% 1256ms 8.42% KSPSolve_CG 8ms 0.054% 39.15% 1225ms 8.21% H5D__chunk_cacheable 4ms 0.027% 39.18% 1177ms 7.89% H5F_block_write 2ms 0.013% 39.19% 1173ms 7.86% H5PB_write 52ms 0.35% 39.54% 1171ms 7.85% 2ms 0.013% 39.55% 1171ms 7.85% H5F__accum_write 0 0% 39.55% 1169ms 7.83% H5FD_write 6ms 0.04% 39.60% 1095ms 7.34% H5D__mpio_select_write 187ms 1.25% 40.85% 1064ms 7.13% H5S_select_iterate 0 0% 40.85% 973ms 6.52% PMPI_File_write_at_all 947ms 6.35% 47.20% 947ms 6.35% __GI_pwritev64 3ms 0.02% 47.22% 931ms 6.24% std::pow (inline) 91ms 0.61% 47.83% 928ms 6.22% __pow 82ms 0.55% 48.37% 887ms 5.94% H5D__chunk_set_sizes 148ms 0.99% 49.37% 836ms 5.60% __ieee754_pow_fma 322ms 2.16% 51.52% 746ms 5.00% MonodomainSolver::SetupLinearSystem 0 0% 51.52% 701ms 4.70% PCApply 1ms 0.0067% 51.53% 695ms 4.66% PCApply_BJacobi_Singleblock 284ms 1.90% 53.43% 679ms 4.55% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 53.43% 664ms 4.45% KSPSolve_PREONLY 1ms 0.0067% 53.44% 659ms 4.42% PCApply_ICC 3ms 0.02% 53.46% 658ms 4.41% MatSolve 650ms 4.36% 57.82% 655ms 4.39% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 57.84% 545ms 3.65% MatMult 541ms 3.63% 61.46% 542ms 3.63% MatMult_SeqAIJ 63ms 0.42% 61.89% 527ms 3.53% H5S_mpio_space_type 1ms 0.0067% 61.89% 503ms 3.37% KSP_PCApply.lto_priv.7 374ms 2.51% 64.40% 374ms 2.51% log_inline (inline) 281ms 1.88% 66.28% 283ms 1.90% exp_inline (inline) 1ms 0.0067% 66.29% 276ms 1.85% KSPConvergedDefault 16ms 0.11% 66.40% 270ms 1.81% H5S_select_iter_next 126ms 0.84% 67.24% 266ms 1.78% TimeStepper::TimeStepper 260ms 1.74% 68.98% 260ms 1.74% H5PL_load 20ms 0.13% 69.12% 245ms 1.64% H5VM_chunk_index 182ms 1.22% 70.34% 234ms 1.57% _int_malloc 35ms 0.23% 70.57% 219ms 1.47% __GI___libc_malloc 0 0% 70.57% 200ms 1.34% KSP_PCApply 191ms 1.28% 71.85% 191ms 1.28% std::isinf (inline) 9ms 0.06% 71.91% 180ms 1.21% ompi_datatype_create 92ms 0.62% 72.53% 177ms 1.19% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 176ms 1.18% 73.71% 176ms 1.18% [libchaste_heart.so] 103ms 0.69% 74.40% 170ms 1.14% top12 (inline) 29ms 0.19% 74.59% 161ms 1.08% AbstractCardiacCell::SetVoltage (partial-inline) 127ms 0.85% 75.44% 159ms 1.07% AbstractOneStepIvpOdeSolver::Solve 24ms 0.16% 75.60% 156ms 1.05% __GI___libc_free 12ms 0.08% 75.69% 155ms 1.04% MPI_Type_free 7ms 0.047% 75.73% 152ms 1.02% ompi_datatype_destroy 126ms 0.84% 76.58% 146ms 0.98% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 76.58% 145ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 143ms 0.96% 77.54% 143ms 0.96% TimeStepper::CalculateNextTime 23ms 0.15% 77.69% 136ms 0.91% H5S_set_version 6ms 0.04% 77.73% 133ms 0.89% ompi_info_register_framework_params 36ms 0.24% 77.97% 132ms 0.88% ompi_datatype_release_args 50ms 0.34% 78.31% 131ms 0.88% _int_free 125ms 0.84% 79.14% 125ms 0.84% ddot_ 3ms 0.02% 79.16% 123ms 0.82% PMPI_File_set_view 58ms 0.39% 79.55% 122ms 0.82% std::__cxx11::basic_string::basic_string 119ms 0.8% 80.35% 119ms 0.8% H5VM_array_offset_pre 1ms 0.0067% 80.36% 114ms 0.76% PMPI_Type_create_resized 50ms 0.34% 80.69% 113ms 0.76% H5VM_array_calc 48ms 0.32% 81.01% 109ms 0.73% H5S_hyper_add_span_element 107ms 0.72% 81.73% 107ms 0.72% H5VM_chunk_index_scaled 98ms 0.66% 82.39% 106ms 0.71% AbstractParameterisedSystem::SetAnyVariable 106ms 0.71% 83.10% 106ms 0.71% __ieee754_log_fma 106ms 0.71% 83.81% 106ms 0.71% __memcpy_avx_unaligned_erms 1ms 0.0067% 83.81% 105ms 0.7% ompi_datatype_duplicate 29ms 0.19% 84.01% 104ms 0.7% __libc_calloc 1ms 0.0067% 84.02% 103ms 0.69% VecDuplicate 1ms 0.0067% 84.02% 102ms 0.68% VecDuplicate_MPI 71ms 0.48% 84.50% 95ms 0.64% AbstractParameterisedSystem::GetAnyVariable 3ms 0.02% 84.52% 95ms 0.64% VecNorm 38ms 0.25% 84.77% 95ms 0.64% ompi_datatype_set_args 2ms 0.013% 84.79% 92ms 0.62% opal_datatype_create_desc 43ms 0.29% 85.07% 91ms 0.61% AbstractCardiacCell::GetVoltage (partial-inline) 91ms 0.61% 85.68% 91ms 0.61% std::vector::operator[] (inline) 1ms 0.0067% 85.69% 86ms 0.58% VecNorm_Seq 55ms 0.37% 86.06% 80ms 0.54% H5SL_search 51ms 0.34% 86.40% 80ms 0.54% TimeStepper::AdvanceOneTimeStep 1ms 0.0067% 86.41% 79ms 0.53% MPI_Type_contiguous 3ms 0.02% 86.43% 79ms 0.53% MPI_Type_create_hindexed 7ms 0.047% 86.48% 77ms 0.52% PMPI_Type_vector