File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116179ms, 91.33% of 127203ms total Dropped 1160 nodes (cum <= 636.01ms) flat flat% sum% cum cum% 0 0% 0% 127191ms 100% __libc_start_call_main 0 0% 0% 127191ms 100% __libc_start_main_impl 0 0% 0% 127191ms 100% _start 0 0% 0% 127188ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127188ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127188ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127188ms 100% main 0 0% 0% 127151ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127151ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127151ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127151ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127151ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 127150ms 100% AbstractConvergenceTester::Converge 5ms 0.0039% 0.0039% 125964ms 99.03% AbstractCardiacProblem::Solve 5ms 0.0039% 0.0079% 125134ms 98.37% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.011% 68502ms 53.85% LinearSystem::Solve 2ms 0.0016% 0.013% 67962ms 53.43% KSPSolve 14ms 0.011% 0.024% 67961ms 53.43% KSPSolve_Private 12ms 0.0094% 0.033% 67622ms 53.16% KSPSolve_SYMMLQ 428ms 0.34% 0.37% 47388ms 37.25% AbstractCardiacTissue::SolveCellSystems 7ms 0.0055% 0.37% 39392ms 30.97% PCApply 4ms 0.0031% 0.38% 39375ms 30.95% PCApply_BJacobi_Singleblock 3ms 0.0024% 0.38% 36934ms 29.04% KSPSolve_PREONLY (partial-inline) 1006ms 0.79% 1.17% 36923ms 29.03% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 7ms 0.0055% 1.18% 35725ms 28.09% MatSolve 0 0% 1.18% 35725ms 28.09% PCApply_ICC 35312ms 27.76% 28.94% 35718ms 28.08% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0031% 28.94% 33879ms 26.63% KSP_PCApply.lto_priv.18 7720ms 6.07% 35.01% 32667ms 25.68% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.0047% 35.01% 22811ms 17.93% MatMult 243ms 0.19% 35.21% 22805ms 17.93% MatMult_SeqAIJ (partial-inline) 22304ms 17.53% 52.74% 22803ms 17.93% MatMult_SeqAIJ_Inode (inline) 2201ms 1.73% 54.47% 16772ms 13.19% CardiacNewtonSolver::Solve 5522ms 4.34% 58.81% 9952ms 7.82% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1467ms 1.15% 59.96% 9688ms 7.62% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 224ms 0.18% 60.14% 9132ms 7.18% AbstractCardiacTissue::UpdateCaches (inline) 1756ms 1.38% 61.52% 8523ms 6.70% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1230ms 0.97% 62.49% 8132ms 6.39% BidomainSolver::SetupLinearSystem 7917ms 6.22% 68.71% 7917ms 6.22% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.71% 7474ms 5.88% KSP_PCApply (partial-inline) 6ms 0.0047% 68.72% 6895ms 5.42% KSPConvergedDefault 4144ms 3.26% 71.97% 4225ms 3.32% __ieee754_log_fma 0 0% 71.97% 4166ms 3.28% boost::numeric::ublas::norm_inf (inline) 2907ms 2.29% 74.26% 4166ms 3.28% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.26% 4166ms 3.28% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.26% 4166ms 3.28% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 16ms 0.013% 74.27% 3412ms 2.68% MatNullSpaceRemove 3336ms 2.62% 76.89% 3336ms 2.62% ddot_ 32ms 0.025% 76.92% 3286ms 2.58% std::pow (inline) 415ms 0.33% 77.25% 3242ms 2.55% __pow 1956ms 1.54% 78.78% 3045ms 2.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 399ms 0.31% 79.10% 2800ms 2.20% __ieee754_pow_fma 2743ms 2.16% 81.25% 2743ms 2.16% __memcpy_avx_unaligned_erms 4ms 0.0031% 81.26% 2713ms 2.13% VecDot 1ms 0.00079% 81.26% 2709ms 2.13% VecDot_Seq 2ms 0.0016% 81.26% 2708ms 2.13% VecXDot_Seq_Private.constprop.0 0 0% 81.26% 2706ms 2.13% PetscMemcpy (inline) 14ms 0.011% 81.27% 2318ms 1.82% VecCopy 3ms 0.0024% 81.27% 2302ms 1.81% VecCopy_Seq (partial-inline) 2ms 0.0016% 81.27% 2147ms 1.69% VecMDot 14ms 0.011% 81.29% 2145ms 1.69% VecMXDot_Private 2124ms 1.67% 82.95% 2128ms 1.67% VecMDot_Seq 14ms 0.011% 82.97% 2108ms 1.66% VecAXPY 8ms 0.0063% 82.97% 2094ms 1.65% VecAXPY_Seq 2071ms 1.63% 84.60% 2071ms 1.63% daxpy_ 1ms 0.00079% 84.60% 1989ms 1.56% AbstractFeVolumeIntegralAssembler::DoAssemble 22ms 0.017% 84.62% 1670ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1577ms 1.24% 85.86% 1626ms 1.28% exp_inline (inline) 0 0% 85.86% 1380ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.86% 1252ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.86% 1252ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.86% 1252ms 0.98% boost_numeric_ublas_abs (inline) 1252ms 0.98% 86.84% 1252ms 0.98% std::abs (inline) 10ms 0.0079% 86.85% 1249ms 0.98% VecMAXPY 1226ms 0.96% 87.81% 1239ms 0.97% VecMAXPY_Seq 8ms 0.0063% 87.82% 1077ms 0.85% boost::numeric::ublas::matrix_assign (inline) 213ms 0.17% 87.99% 1063ms 0.84% boost::numeric::ublas::indexing_matrix_assign 713ms 0.56% 88.55% 1057ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.55% 1025ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.55% 1025ms 0.81% CuboidMeshConstructor::Construct 2ms 0.0016% 88.55% 1025ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 975ms 0.77% 89.32% 975ms 0.77% [libchaste_heart.so] 1ms 0.00079% 89.32% 942ms 0.74% VecNorm 0 0% 89.32% 934ms 0.73% VecNorm_Seq 2ms 0.0016% 89.32% 925ms 0.73% Element::Element 3ms 0.0024% 89.32% 905ms 0.71% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0031% 89.32% 870ms 0.68% BidomainAssembler::ComputeMatrixTerm 3ms 0.0024% 89.33% 863ms 0.68% AbstractTetrahedralElement::AbstractTetrahedralElement 10ms 0.0079% 89.33% 843ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0039% 89.34% 808ms 0.64% VecScale 6ms 0.0047% 89.34% 803ms 0.63% VecScale_Seq 794ms 0.62% 89.97% 794ms 0.62% dscal_ 1ms 0.00079% 89.97% 766ms 0.6% BidomainProblem::WriteOneStep 758ms 0.6% 90.56% 758ms 0.6% __memset_avx2_unaligned_erms 1ms 0.00079% 90.56% 750ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 227ms 0.18% 90.74% 749ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 90.74% 749ms 0.59% PetscMemzero (inline) 745ms 0.59% 91.33% 745ms 0.59% log_inline (inline) 2ms 0.0016% 91.33% 689ms 0.54% VecDuplicate 0 0% 91.33% 650ms 0.51% VecNorm_MPI 4ms 0.0031% 91.33% 650ms 0.51% VecNorm_MPI_Default.constprop.0