File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 378ms, 86.50% of 437ms total Dropped 185 nodes (cum <= 2.19ms) flat flat% sum% cum cum% 0 0% 0% 431ms 98.63% __libc_start_call_main 0 0% 0% 431ms 98.63% __libc_start_main_impl 0 0% 0% 431ms 98.63% _start 0 0% 0% 428ms 97.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 428ms 97.94% CxxTest::TestRunner::runAllTests 0 0% 0% 428ms 97.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 428ms 97.94% main 0 0% 0% 395ms 90.39% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 394ms 90.16% CxxTest::RealTestDescription::run 0 0% 0% 394ms 90.16% CxxTest::TestRunner::runTest (inline) 0 0% 0% 394ms 90.16% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 394ms 90.16% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 390ms 89.24% AbstractCardiacProblem::Solve 0 0% 0% 390ms 89.24% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 355ms 81.24% LinearSystem::Solve 0 0% 0% 353ms 80.78% KSPSolve 0 0% 0% 353ms 80.78% KSPSolve_Private 1ms 0.23% 0.23% 352ms 80.55% KSPSolve_CG 0 0% 0.23% 214ms 48.97% KSP_PCApply.lto_priv.7 0 0% 0.23% 206ms 47.14% PCApply 0 0% 0.23% 206ms 47.14% PCApply_BJacobi_Singleblock 0 0% 0.23% 170ms 38.90% KSPSolve_PREONLY (partial-inline) 0 0% 0.23% 158ms 36.16% MatSolve 155ms 35.47% 35.70% 158ms 36.16% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.70% 158ms 36.16% PCApply_ICC 2ms 0.46% 36.16% 72ms 16.48% MatMult 3ms 0.69% 36.84% 70ms 16.02% MatMult_SeqAIJ (partial-inline) 67ms 15.33% 52.17% 70ms 16.02% MatMult_SeqAIJ_Inode (inline) 46ms 10.53% 62.70% 46ms 10.53% ddot_ 0 0% 62.70% 35ms 8.01% MatNullSpaceRemove 1ms 0.23% 62.93% 31ms 7.09% VecTDot 0 0% 62.93% 30ms 6.86% AbstractCardiacTissue::SolveCellSystems 0 0% 62.93% 30ms 6.86% CxxTest::RealWorldDescription::setUp 0 0% 62.93% 30ms 6.86% PMPI_Init_thread 0 0% 62.93% 30ms 6.86% PetscInitialize 0 0% 62.93% 30ms 6.86% PetscSetup::setUpWorld 0 0% 62.93% 30ms 6.86% PetscSetupUtils::CommonSetup 0 0% 62.93% 30ms 6.86% PetscSetupUtils::InitialisePetsc 0 0% 62.93% 30ms 6.86% VecTDot_Seq 0 0% 62.93% 30ms 6.86% VecXDot_Seq_Private.constprop.0 0 0% 62.93% 30ms 6.86% ompi_mpi_init 1ms 0.23% 63.16% 23ms 5.26% 0 0% 63.16% 22ms 5.03% VecMDot 22ms 5.03% 68.19% 22ms 5.03% VecMDot_Seq 0 0% 68.19% 22ms 5.03% VecMXDot_Private 0 0% 68.19% 21ms 4.81% orte_init 0 0% 68.19% 16ms 3.66% VecNorm 0 0% 68.19% 16ms 3.66% VecNorm_Seq 0 0% 68.19% 15ms 3.43% AbstractCardiacCell::ComputeExceptVoltage 0 0% 68.19% 14ms 3.20% AbstractOneStepIvpOdeSolver::InternalSolve 3ms 0.69% 68.88% 14ms 3.20% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 68.88% 14ms 3.20% EulerIvpOdeSolver::CalculateNextYValue 0 0% 68.88% 14ms 3.20% KSP_PCApply (partial-inline) 0 0% 68.88% 13ms 2.97% VecMAXPY 12ms 2.75% 71.62% 13ms 2.97% VecMAXPY_Seq 0 0% 71.62% 13ms 2.97% hwloc_topology_load 0 0% 71.62% 12ms 2.75% __GI__dl_catch_exception 0 0% 71.62% 12ms 2.75% _dl_catch_error 0 0% 71.62% 12ms 2.75% _dlerror_run 5ms 1.14% 72.77% 11ms 2.52% __GI___exp 0 0% 72.77% 11ms 2.52% hwloc_linux_get_tid_last_cpu_location 0 0% 72.77% 10ms 2.29% mca_base_framework_open 0 0% 72.77% 10ms 2.29% opal_stackframe_output 0 0% 72.77% 9ms 2.06% VecDuplicate 0 0% 72.77% 9ms 2.06% ___dlopen 0 0% 72.77% 9ms 2.06% _dl_open 0 0% 72.77% 9ms 2.06% dl_open_worker 0 0% 72.77% 9ms 2.06% dl_open_worker_begin 0 0% 72.77% 9ms 2.06% dlopen_doit 0 0% 72.77% 9ms 2.06% dlopen_implementation (inline) 0 0% 72.77% 8ms 1.83% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.92% 73.68% 8ms 1.83% CellLuoRudy1991FromCellML::GetIIonic 0 0% 73.68% 8ms 1.83% VecAXPY 0 0% 73.68% 8ms 1.83% VecAXPY_Seq 8ms 1.83% 75.51% 8ms 1.83% daxpy_ 0 0% 75.51% 8ms 1.83% mca_base_framework_components_register 0 0% 75.51% 8ms 1.83% mca_base_framework_register 4ms 0.92% 76.43% 7ms 1.60% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 76.43% 7ms 1.60% PetscMemcpy (inline) 0 0% 76.43% 7ms 1.60% VecAYPX 7ms 1.60% 78.03% 7ms 1.60% VecAYPX_Seq 0 0% 78.03% 7ms 1.60% VecDuplicate_Seq 7ms 1.60% 79.63% 7ms 1.60% __memcpy_avx_unaligned_erms 0 0% 79.63% 7ms 1.60% mca_base_component_find 0 0% 79.63% 7ms 1.60% mca_base_component_repository_open 0 0% 79.63% 6ms 1.37% VecDestroy 6ms 1.37% 81.01% 6ms 1.37% __ieee754_exp_fma 0 0% 81.01% 6ms 1.37% _dl_init 0 0% 81.01% 6ms 1.37% _dl_start_user 0 0% 81.01% 6ms 1.37% call_init (inline) 2ms 0.46% 81.46% 5ms 1.14% BidomainSolver::SetupLinearSystem 2ms 0.46% 81.92% 5ms 1.14% __cxa_finalize 0 0% 81.92% 5ms 1.14% _dl_call_fini 0 0% 81.92% 5ms 1.14% opal_hwloc_base_get_topology 0 0% 81.92% 5ms 1.14% orte_ess_base_proc_binding 0 0% 81.92% 4ms 0.92% AbstractCardiacProblem::Initialise 1ms 0.23% 82.15% 4ms 0.92% PetscMallocA 0 0% 82.15% 4ms 0.92% PetscMemzero (inline) 0 0% 82.15% 4ms 0.92% VecCopy 0 0% 82.15% 4ms 0.92% VecCopy_Seq (partial-inline) 1ms 0.23% 82.38% 4ms 0.92% VecCreate 2ms 0.46% 82.84% 4ms 0.92% VecSet 4ms 0.92% 83.75% 4ms 0.92% __GI___libc_read 4ms 0.92% 84.67% 4ms 0.92% __memset_avx2_unaligned_erms 0 0% 84.67% 4ms 0.92% _dl_map_object 0 0% 84.67% 4ms 0.92% _dl_open_relocate_one_object (inline) 0 0% 84.67% 4ms 0.92% _dl_relocate_object 0 0% 84.67% 4ms 0.92% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 84.67% 4ms 0.92% boost::serialization::singleton::get_instance 1ms 0.23% 84.90% 4ms 0.92% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.90% 4ms 0.92% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.90% 4ms 0.92% elf_dynamic_do_Rela (inline) 0 0% 84.90% 3ms 0.69% CxxTest::RealWorldDescription::tearDown 0 0% 84.90% 3ms 0.69% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.90% 3ms 0.69% KSPConvergedDefault 0 0% 84.90% 3ms 0.69% PetscFinalize 0 0% 84.90% 3ms 0.69% PetscHeaderDestroy_Private 0 0% 84.90% 3ms 0.69% PetscMallocAlign (partial-inline) 0 0% 84.90% 3ms 0.69% PetscSetup::tearDownWorld 0 0% 84.90% 3ms 0.69% PetscSetupUtils::CommonFinalize 1ms 0.23% 85.13% 3ms 0.69% VecDestroy_Seq 1ms 0.23% 85.35% 3ms 0.69% VecSetType 0 0% 85.35% 3ms 0.69% XOpenDisplay 0 0% 85.35% 3ms 0.69% [hwloc_gl.so] 0 0% 85.35% 3ms 0.69% [libxcb.so.1.1.0] 0 0% 85.35% 3ms 0.69% _XConnectXCB 0 0% 85.35% 3ms 0.69% __GI___libc_malloc 0 0% 85.35% 3ms 0.69% __GI_exit 0 0% 85.35% 3ms 0.69% __dlclose 1ms 0.23% 85.58% 3ms 0.69% __ieee754_pow_fma 0 0% 85.58% 3ms 0.69% __pow 0 0% 85.58% 3ms 0.69% __run_exit_handlers 0 0% 85.58% 3ms 0.69% _dl_close 0 0% 85.58% 3ms 0.69% _dl_close_worker (inline) 0 0% 85.58% 3ms 0.69% _dl_fini 0 0% 85.58% 3ms 0.69% _dl_lookup_symbol_x 0 0% 85.58% 3ms 0.69% _dl_map_object_from_fd 2ms 0.46% 86.04% 3ms 0.69% _int_malloc 0 0% 86.04% 3ms 0.69% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 2ms 0.46% 86.50% 3ms 0.69% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 86.50% 3ms 0.69% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 86.50% 3ms 0.69% mca_base_component_repository_release 0 0% 86.50% 3ms 0.69% mca_base_framework_close 0 0% 86.50% 3ms 0.69% mca_topo_base_dist_graph_neighbors_count 0 0% 86.50% 3ms 0.69% ompi_mpi_finalize 0 0% 86.50% 3ms 0.69% std::pow (inline) 0 0% 86.50% 3ms 0.69% xcb_connect_to_display_with_auth_info