File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12903ms, 87.23% of 14792ms total Dropped 744 nodes (cum <= 73.96ms) flat flat% sum% cum cum% 0 0% 0% 14785ms 100% __libc_start_call_main 0 0% 0% 14785ms 100% __libc_start_main_impl 0 0% 0% 14785ms 100% _start 0 0% 0% 14782ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14782ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14782ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14782ms 99.93% main 0 0% 0% 14747ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14747ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14747ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 4ms 0.027% 0.027% 14726ms 99.55% AbstractCardiacProblem::Solve 1ms 0.0068% 0.034% 11409ms 77.13% AbstractDynamicLinearPdeSolver::Solve 27ms 0.18% 0.22% 9164ms 61.95% AbstractCardiacTissue::SolveCellSystems 136ms 0.92% 1.14% 5719ms 38.66% AbstractCardiacCell::ComputeExceptVoltage 169ms 1.14% 2.28% 4932ms 33.34% AbstractOneStepIvpOdeSolver::InternalSolve 193ms 1.30% 3.58% 4197ms 28.37% EulerIvpOdeSolver::CalculateNextYValue 882ms 5.96% 9.55% 3946ms 26.68% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1812ms 12.25% 21.80% 3642ms 24.62% __GI___exp 2ms 0.014% 21.81% 3251ms 21.98% MonodomainProblem::WriteOneStep 1ms 0.0068% 21.82% 3122ms 21.11% Hdf5DataWriter::PutVector 0 0% 21.82% 3103ms 20.98% H5Dwrite 4ms 0.027% 21.84% 3073ms 20.77% H5D__write 108ms 0.73% 22.57% 2669ms 18.04% AbstractCardiacTissue::UpdateCaches (inline) 813ms 5.50% 28.07% 2521ms 17.04% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.014% 28.08% 1848ms 12.49% H5D__chunk_collective_write 16ms 0.11% 28.19% 1846ms 12.48% H5F_set_coll_metadata_reads 1598ms 10.80% 38.99% 1753ms 11.85% __ieee754_exp_fma 23ms 0.16% 39.15% 1664ms 11.25% H5FD_s3comms_uriencode 3ms 0.02% 39.17% 1497ms 10.12% LinearSystem::Solve 2ms 0.014% 39.18% 1365ms 9.23% KSPSolve 2ms 0.014% 39.20% 1363ms 9.21% KSPSolve_Private 0 0% 39.20% 1350ms 9.13% KSPSolve_CG 2ms 0.014% 39.21% 1250ms 8.45% H5F_block_write 2ms 0.014% 39.22% 1248ms 8.44% H5PB_write 1ms 0.0068% 39.23% 1246ms 8.42% H5FD_write 0 0% 39.23% 1246ms 8.42% H5F__accum_write 53ms 0.36% 39.59% 1243ms 8.40% 2ms 0.014% 39.60% 1171ms 7.92% H5D__mpio_select_write 6ms 0.041% 39.64% 1133ms 7.66% H5D__chunk_cacheable 1ms 0.0068% 39.65% 1068ms 7.22% PMPI_File_write_at_all 1033ms 6.98% 46.63% 1033ms 6.98% __GI_pwritev64 377ms 2.55% 49.18% 974ms 6.58% H5S_select_iterate 2ms 0.014% 49.20% 892ms 6.03% std::pow (inline) 92ms 0.62% 49.82% 890ms 6.02% __pow 99ms 0.67% 50.49% 798ms 5.39% __ieee754_pow_fma 319ms 2.16% 52.64% 730ms 4.94% MonodomainSolver::SetupLinearSystem 1ms 0.0068% 52.65% 723ms 4.89% PCApply 0 0% 52.65% 717ms 4.85% PCApply_BJacobi_Singleblock 1ms 0.0068% 52.66% 682ms 4.61% KSPSolve_PREONLY 2ms 0.014% 52.67% 679ms 4.59% PCApply_ICC 1ms 0.0068% 52.68% 677ms 4.58% MatSolve 664ms 4.49% 57.17% 676ms 4.57% MatSolve_SeqSBAIJ_1_NaturalOrdering 269ms 1.82% 58.98% 621ms 4.20% CellLuoRudy1991FromCellML::VerifyStateVariables 50ms 0.34% 59.32% 606ms 4.10% H5D__chunk_set_sizes 3ms 0.02% 59.34% 603ms 4.08% MatMult 599ms 4.05% 63.39% 600ms 4.06% MatMult_SeqAIJ 2ms 0.014% 63.41% 560ms 3.79% KSP_PCApply.lto_priv.7 56ms 0.38% 63.78% 500ms 3.38% H5S_mpio_space_type 373ms 2.52% 66.31% 373ms 2.52% log_inline (inline) 289ms 1.95% 68.26% 290ms 1.96% exp_inline (inline) 143ms 0.97% 69.23% 269ms 1.82% TimeStepper::TimeStepper 48ms 0.32% 69.55% 225ms 1.52% __GI___libc_malloc 2ms 0.014% 69.56% 222ms 1.50% KSPConvergedDefault 169ms 1.14% 70.71% 209ms 1.41% _int_malloc 20ms 0.14% 70.84% 208ms 1.41% H5VM_chunk_index 117ms 0.79% 71.63% 188ms 1.27% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 116ms 0.78% 72.42% 187ms 1.26% top12 (inline) 11ms 0.074% 72.49% 186ms 1.26% ompi_datatype_create 176ms 1.19% 73.68% 176ms 1.19% [libchaste_heart.so] 0 0% 73.68% 165ms 1.12% KSP_PCApply 163ms 1.10% 74.78% 163ms 1.10% std::isinf (inline) 38ms 0.26% 75.04% 159ms 1.07% AbstractCardiacCell::SetVoltage (partial-inline) 125ms 0.85% 75.89% 153ms 1.03% AbstractOneStepIvpOdeSolver::Solve 29ms 0.2% 76.08% 152ms 1.03% __GI___libc_free 151ms 1.02% 77.10% 151ms 1.02% ddot_ 123ms 0.83% 77.93% 149ms 1.01% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 8ms 0.054% 77.99% 147ms 0.99% ompi_datatype_destroy 6ms 0.041% 78.03% 141ms 0.95% MPI_Type_free 22ms 0.15% 78.18% 130ms 0.88% H5S_set_version 130ms 0.88% 79.06% 130ms 0.88% TimeStepper::CalculateNextTime 0 0% 79.06% 127ms 0.86% Hdf5DataWriter::PutUnlimitedVariable 123ms 0.83% 79.89% 123ms 0.83% __ieee754_log_fma 51ms 0.34% 80.23% 123ms 0.83% _int_free 7ms 0.047% 80.28% 122ms 0.82% ompi_info_register_framework_params 31ms 0.21% 80.49% 120ms 0.81% ompi_datatype_release_args 1ms 0.0068% 80.50% 113ms 0.76% PMPI_File_set_view 1ms 0.0068% 80.50% 110ms 0.74% PMPI_Type_create_resized 0 0% 80.50% 110ms 0.74% VecDuplicate 5ms 0.034% 80.54% 110ms 0.74% VecDuplicate_MPI 43ms 0.29% 80.83% 108ms 0.73% H5VM_array_calc 107ms 0.72% 81.55% 107ms 0.72% __memcpy_avx_unaligned_erms 51ms 0.34% 81.90% 106ms 0.72% H5S_hyper_add_span_element 1ms 0.0068% 81.90% 105ms 0.71% VecNorm 104ms 0.7% 82.61% 104ms 0.7% H5VM_chunk_index_scaled 0 0% 82.61% 102ms 0.69% ompi_datatype_duplicate 94ms 0.64% 83.24% 100ms 0.68% AbstractParameterisedSystem::SetAnyVariable 50ms 0.34% 83.58% 100ms 0.68% std::__cxx11::basic_string::basic_string 0 0% 83.58% 99ms 0.67% VecNorm_Seq 75ms 0.51% 84.09% 94ms 0.64% AbstractParameterisedSystem::GetAnyVariable 84ms 0.57% 84.65% 84ms 0.57% H5VM_array_offset_pre 1ms 0.0068% 84.66% 84ms 0.57% VecTDot 26ms 0.18% 84.84% 84ms 0.57% __libc_calloc 83ms 0.56% 85.40% 83ms 0.56% std::vector::operator[] (inline) 26ms 0.18% 85.57% 82ms 0.55% ompi_datatype_set_args 35ms 0.24% 85.81% 81ms 0.55% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0068% 85.82% 81ms 0.55% VecTDot_Seq 0 0% 85.82% 80ms 0.54% VecXDot_Seq_Private.constprop.0 4ms 0.027% 85.84% 80ms 0.54% opal_datatype_create_desc 5ms 0.034% 85.88% 78ms 0.53% MPI_Type_create_hindexed 77ms 0.52% 86.40% 77ms 0.52% [libm.so.6] 42ms 0.28% 86.68% 76ms 0.51% TimeStepper::AdvanceOneTimeStep 76ms 0.51% 87.20% 76ms 0.51% asuint64 (inline) 5ms 0.034% 87.23% 74ms 0.5% MPI_Type_contiguous