File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 384ms, 86.68% of 443ms total Dropped 206 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 434ms 97.97% __libc_start_call_main 0 0% 0% 434ms 97.97% __libc_start_main_impl 0 0% 0% 434ms 97.97% _start 0 0% 0% 431ms 97.29% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 431ms 97.29% CxxTest::TestRunner::runAllTests 0 0% 0% 431ms 97.29% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 431ms 97.29% main 0 0% 0% 395ms 89.16% CxxTest::RealTestDescription::run 0 0% 0% 395ms 89.16% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 395ms 89.16% CxxTest::TestRunner::runTest (inline) 0 0% 0% 395ms 89.16% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 395ms 89.16% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 390ms 88.04% AbstractCardiacProblem::Solve 0 0% 0% 389ms 87.81% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 342ms 77.20% LinearSystem::Solve 0 0% 0% 340ms 76.75% KSPSolve 0 0% 0% 340ms 76.75% KSPSolve_CG 0 0% 0% 340ms 76.75% KSPSolve_Private 0 0% 0% 206ms 46.50% KSP_PCApply.lto_priv.7 0 0% 0% 196ms 44.24% PCApply 0 0% 0% 196ms 44.24% PCApply_BJacobi_Singleblock 0 0% 0% 167ms 37.70% KSPSolve_PREONLY (partial-inline) 0 0% 0% 150ms 33.86% MatSolve 147ms 33.18% 33.18% 150ms 33.86% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 33.18% 150ms 33.86% PCApply_ICC 0 0% 33.18% 78ms 17.61% MatMult 4ms 0.9% 34.09% 78ms 17.61% MatMult_SeqAIJ (partial-inline) 74ms 16.70% 50.79% 78ms 17.61% MatMult_SeqAIJ_Inode (inline) 1ms 0.23% 51.02% 43ms 9.71% AbstractCardiacTissue::SolveCellSystems 0 0% 51.02% 41ms 9.26% MatNullSpaceRemove 40ms 9.03% 60.05% 40ms 9.03% ddot_ 0 0% 60.05% 32ms 7.22% CxxTest::RealWorldDescription::setUp 0 0% 60.05% 32ms 7.22% PMPI_Init_thread 0 0% 60.05% 32ms 7.22% PetscInitialize 0 0% 60.05% 32ms 7.22% PetscSetup::setUpWorld 0 0% 60.05% 32ms 7.22% PetscSetupUtils::CommonSetup 0 0% 60.05% 32ms 7.22% PetscSetupUtils::InitialisePetsc 0 0% 60.05% 32ms 7.22% ompi_mpi_init 0 0% 60.05% 26ms 5.87% AbstractCardiacCell::ComputeExceptVoltage 0 0% 60.05% 26ms 5.87% VecMDot 1ms 0.23% 60.27% 26ms 5.87% VecMXDot_Private 0 0% 60.27% 26ms 5.87% VecTDot 0 0% 60.27% 26ms 5.87% VecTDot_Seq 0 0% 60.27% 26ms 5.87% VecXDot_Seq_Private.constprop.0 25ms 5.64% 65.91% 25ms 5.64% VecMDot_Seq 1ms 0.23% 66.14% 24ms 5.42% 0 0% 66.14% 23ms 5.19% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 66.14% 23ms 5.19% orte_init 3ms 0.68% 66.82% 21ms 4.74% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 66.82% 21ms 4.74% EulerIvpOdeSolver::CalculateNextYValue 0 0% 66.82% 20ms 4.51% KSP_PCApply (partial-inline) 11ms 2.48% 69.30% 20ms 4.51% __GI___exp 1ms 0.23% 69.53% 16ms 3.61% VecNorm 0 0% 69.53% 15ms 3.39% VecMAXPY 15ms 3.39% 72.91% 15ms 3.39% VecMAXPY_Seq 0 0% 72.91% 15ms 3.39% VecNorm_Seq 0 0% 72.91% 14ms 3.16% __GI__dl_catch_exception 0 0% 72.91% 14ms 3.16% _dl_catch_error 0 0% 72.91% 14ms 3.16% _dlerror_run 0 0% 72.91% 14ms 3.16% hwloc_topology_load 0 0% 72.91% 14ms 3.16% opal_stackframe_output 0 0% 72.91% 13ms 2.93% AbstractCardiacTissue::UpdateCaches (inline) 8ms 1.81% 74.72% 13ms 2.93% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.72% 13ms 2.93% hwloc_linux_get_tid_last_cpu_location 0 0% 74.72% 13ms 2.93% mca_base_framework_open 0 0% 74.72% 13ms 2.93% mca_base_framework_register 0 0% 74.72% 12ms 2.71% mca_base_component_find 0 0% 74.72% 12ms 2.71% mca_base_component_repository_open 0 0% 74.72% 12ms 2.71% mca_base_framework_components_register 0 0% 74.72% 11ms 2.48% ___dlopen 0 0% 74.72% 11ms 2.48% _dl_open 0 0% 74.72% 11ms 2.48% dl_open_worker 0 0% 74.72% 11ms 2.48% dl_open_worker_begin 0 0% 74.72% 11ms 2.48% dlopen_doit 0 0% 74.72% 11ms 2.48% dlopen_implementation (inline) 0 0% 74.72% 10ms 2.26% VecDuplicate 0 0% 74.72% 9ms 2.03% VecDuplicate_Seq 8ms 1.81% 76.52% 9ms 2.03% __ieee754_exp_fma 0 0% 76.52% 8ms 1.81% _dl_init 0 0% 76.52% 8ms 1.81% _dl_start_user 0 0% 76.52% 8ms 1.81% call_init (inline) 0 0% 76.52% 7ms 1.58% VecAYPX 7ms 1.58% 78.10% 7ms 1.58% VecAYPX_Seq 1ms 0.23% 78.33% 7ms 1.58% _dl_map_object 0 0% 78.33% 6ms 1.35% VecAXPY 0 0% 78.33% 6ms 1.35% VecAXPY_Seq 6ms 1.35% 79.68% 6ms 1.35% daxpy_ 0 0% 79.68% 5ms 1.13% VecCreate 5ms 1.13% 80.81% 5ms 1.13% [libchaste_heart.so] 0 0% 80.81% 5ms 1.13% __GI___libc_free 0 0% 80.81% 5ms 1.13% _dl_map_object_from_fd 3ms 0.68% 81.49% 5ms 1.13% _int_free 0 0% 81.49% 5ms 1.13% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 81.49% 5ms 1.13% boost::serialization::singleton::get_instance 0 0% 81.49% 5ms 1.13% opal_hwloc_base_get_topology 0 0% 81.49% 5ms 1.13% orte_ess_base_proc_binding 0 0% 81.49% 4ms 0.9% AbstractCardiacProblem::Initialise 1ms 0.23% 81.72% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 81.72% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 81.72% 4ms 0.9% PetscFinalize 0 0% 81.72% 4ms 0.9% PetscMemcpy (inline) 0 0% 81.72% 4ms 0.9% PetscMemzero (inline) 0 0% 81.72% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 81.72% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 81.72% 4ms 0.9% VecSetType 0 0% 81.72% 4ms 0.9% XOpenDisplay 0 0% 81.72% 4ms 0.9% [hwloc_gl.so] 0 0% 81.72% 4ms 0.9% [libxcb.so.1.1.0] 0 0% 81.72% 4ms 0.9% _XConnectXCB 1ms 0.23% 81.94% 4ms 0.9% __cxa_finalize 4ms 0.9% 82.84% 4ms 0.9% __memset_avx2_unaligned_erms 0 0% 82.84% 4ms 0.9% _dl_call_fini 0 0% 82.84% 4ms 0.9% _dl_lookup_symbol_x 0 0% 82.84% 4ms 0.9% _dl_open_relocate_one_object (inline) 0 0% 82.84% 4ms 0.9% _dl_relocate_object 3ms 0.68% 83.52% 4ms 0.9% do_lookup_x 0 0% 83.52% 4ms 0.9% elf_dynamic_do_Rela (inline) 0 0% 83.52% 4ms 0.9% elf_machine_rela (inline) 0 0% 83.52% 4ms 0.9% resolve_map (inline) 0 0% 83.52% 4ms 0.9% xcb_connect_to_display_with_auth_info 0 0% 83.52% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.52% 3ms 0.68% KSPConvergedDefault 0 0% 83.52% 3ms 0.68% PMPI_Comm_get_attr 0 0% 83.52% 3ms 0.68% PetscHeaderCreate_Private 1ms 0.23% 83.75% 3ms 0.68% PetscMallocA 0 0% 83.75% 3ms 0.68% VecCreate_Seq 0 0% 83.75% 3ms 0.68% VecDestroy 0 0% 83.75% 3ms 0.68% VecSet 0 0% 83.75% 3ms 0.68% VecSet_Seq (partial-inline) 0 0% 83.75% 3ms 0.68% __GI___libc_malloc 0 0% 83.75% 3ms 0.68% __GI_exit 0 0% 83.75% 3ms 0.68% __dlclose 3ms 0.68% 84.42% 3ms 0.68% __libc_connect 3ms 0.68% 85.10% 3ms 0.68% __memcpy_avx_unaligned_erms 3ms 0.68% 85.78% 3ms 0.68% __mmap64 0 0% 85.78% 3ms 0.68% __run_exit_handlers 0 0% 85.78% 3ms 0.68% _dl_close 2ms 0.45% 86.23% 3ms 0.68% _dl_close_worker (inline) 0 0% 86.23% 3ms 0.68% _dl_fini 0 0% 86.23% 3ms 0.68% _dl_map_segments (inline) 0 0% 86.23% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.23% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.23% 3ms 0.68% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.23% 3ms 0.68% mca_base_component_repository_release 2ms 0.45% 86.68% 3ms 0.68% ompi_attr_get_c 0 0% 86.68% 3ms 0.68% ompi_mpi_finalize