File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109985ms, 91.47% of 120245ms total Dropped 1166 nodes (cum <= 601.23ms) flat flat% sum% cum cum% 0 0% 0% 120228ms 100% __libc_start_call_main 0 0% 0% 120228ms 100% __libc_start_main_impl 0 0% 0% 120228ms 100% _start 0 0% 0% 120225ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120225ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120225ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120225ms 100% main 0 0% 0% 120188ms 100% AbstractConvergenceTester::Converge 0 0% 0% 120188ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120188ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120188ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120188ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120188ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 5ms 0.0042% 0.0042% 118931ms 98.91% AbstractCardiacProblem::Solve 12ms 0.01% 0.014% 118147ms 98.26% AbstractDynamicLinearPdeSolver::Solve 6ms 0.005% 0.019% 66346ms 55.18% LinearSystem::Solve 2ms 0.0017% 0.021% 65741ms 54.67% KSPSolve 8ms 0.0067% 0.027% 65740ms 54.67% KSPSolve_Private 6ms 0.005% 0.032% 65322ms 54.32% KSPSolve_SYMMLQ 202ms 0.17% 0.2% 43006ms 35.77% AbstractCardiacTissue::SolveCellSystems 4ms 0.0033% 0.2% 36719ms 30.54% PCApply 6ms 0.005% 0.21% 36708ms 30.53% PCApply_BJacobi_Singleblock 1ms 0.00083% 0.21% 33997ms 28.27% KSPSolve_PREONLY (partial-inline) 1436ms 1.19% 1.40% 33254ms 27.66% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0025% 1.41% 32832ms 27.30% PCApply_ICC 7ms 0.0058% 1.41% 32829ms 27.30% MatSolve 32329ms 26.89% 28.30% 32822ms 27.30% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0017% 28.30% 31704ms 26.37% KSP_PCApply.lto_priv.18 6879ms 5.72% 34.02% 28716ms 23.88% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 15ms 0.012% 34.03% 22588ms 18.78% MatMult 231ms 0.19% 34.23% 22573ms 18.77% MatMult_SeqAIJ (partial-inline) 22029ms 18.32% 52.55% 22571ms 18.77% MatMult_SeqAIJ_Inode (inline) 1965ms 1.63% 54.18% 14711ms 12.23% CardiacNewtonSolver::Solve 310ms 0.26% 54.44% 8899ms 7.40% AbstractCardiacTissue::UpdateCaches (inline) 4492ms 3.74% 58.17% 8717ms 7.25% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1974ms 1.64% 59.81% 8366ms 6.96% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1074ms 0.89% 60.71% 7832ms 6.51% BidomainSolver::SetupLinearSystem 1ms 0.00083% 60.71% 7019ms 5.84% KSP_PCApply (partial-inline) 804ms 0.67% 61.38% 6912ms 5.75% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5ms 0.0042% 61.38% 6392ms 5.32% KSPConvergedDefault 5833ms 4.85% 66.23% 5833ms 4.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3930ms 3.27% 69.50% 3969ms 3.30% __ieee754_log_fma 0 0% 69.50% 3660ms 3.04% boost::numeric::ublas::norm_inf (inline) 2475ms 2.06% 71.56% 3660ms 3.04% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.56% 3660ms 3.04% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.56% 3660ms 3.04% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0042% 71.56% 3421ms 2.85% MatNullSpaceRemove 3359ms 2.79% 74.36% 3359ms 2.79% __memcpy_avx_unaligned_erms 0 0% 74.36% 3336ms 2.77% PetscMemcpy (inline) 1780ms 1.48% 75.84% 2933ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 19ms 0.016% 75.85% 2872ms 2.39% VecCopy 2861ms 2.38% 78.23% 2861ms 2.38% ddot_ 4ms 0.0033% 78.24% 2850ms 2.37% VecCopy_Seq (partial-inline) 28ms 0.023% 78.26% 2687ms 2.23% std::pow (inline) 365ms 0.3% 78.56% 2651ms 2.20% __pow 14ms 0.012% 78.57% 2540ms 2.11% VecAXPY 6ms 0.005% 78.58% 2526ms 2.10% VecAXPY_Seq 2508ms 2.09% 80.66% 2508ms 2.09% daxpy_ 2441ms 2.03% 82.69% 2441ms 2.03% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 9ms 0.0075% 82.70% 2332ms 1.94% VecDot 0 0% 82.70% 2323ms 1.93% VecDot_Seq 2ms 0.0017% 82.70% 2323ms 1.93% VecXDot_Seq_Private.constprop.0 317ms 0.26% 82.97% 2269ms 1.89% __ieee754_pow_fma 4ms 0.0033% 82.97% 2074ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 82.97% 1899ms 1.58% VecMDot 14ms 0.012% 82.98% 1897ms 1.58% VecMXDot_Private 1869ms 1.55% 84.54% 1875ms 1.56% VecMDot_Seq 30ms 0.025% 84.56% 1712ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 6ms 0.005% 84.57% 1517ms 1.26% VecMAXPY 1452ms 1.21% 85.78% 1515ms 1.26% exp_inline (inline) 1508ms 1.25% 87.03% 1511ms 1.26% VecMAXPY_Seq 0 0% 87.03% 1426ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1207ms 1.00% 88.03% 1207ms 1.00% __memset_avx2_unaligned_erms 0 0% 88.03% 1193ms 0.99% PetscMemzero (inline) 847ms 0.7% 88.74% 1186ms 0.99% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 11ms 0.0091% 88.75% 1139ms 0.95% boost::numeric::ublas::matrix_assign (inline) 223ms 0.19% 88.93% 1121ms 0.93% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.93% 1104ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.93% 1104ms 0.92% CuboidMeshConstructor::Construct 1ms 0.00083% 88.93% 1104ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 0 0% 88.93% 1101ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.93% 1101ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.93% 1101ms 0.92% boost_numeric_ublas_abs (inline) 1101ms 0.92% 89.85% 1101ms 0.92% std::abs (inline) 4ms 0.0033% 89.85% 1040ms 0.86% KSP_RemoveNullSpace (inline) 1ms 0.00083% 89.85% 995ms 0.83% Element::Element 3ms 0.0025% 89.86% 984ms 0.82% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.86% 966ms 0.8% VecDuplicate 4ms 0.0033% 89.86% 937ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.005% 89.87% 894ms 0.74% BidomainAssembler::ComputeMatrixTerm 6ms 0.005% 89.87% 865ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 850ms 0.71% 90.58% 850ms 0.71% [libchaste_heart.so] 5ms 0.0042% 90.58% 848ms 0.71% VecScale 5ms 0.0042% 90.59% 843ms 0.7% VecScale_Seq 2ms 0.0017% 90.59% 841ms 0.7% VecNorm 836ms 0.7% 91.28% 836ms 0.7% dscal_ 2ms 0.0017% 91.28% 833ms 0.69% VecNorm_Seq 14ms 0.012% 91.30% 808ms 0.67% PetscMallocA 5ms 0.0042% 91.30% 794ms 0.66% PetscMallocAlign (partial-inline) 1ms 0.00083% 91.30% 720ms 0.6% BidomainProblem::WriteOneStep 2ms 0.0017% 91.30% 649ms 0.54% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 91.30% 648ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 198ms 0.16% 91.47% 644ms 0.54% AbstractBidomainSolver::CheckCompatibilityCondition