File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12760ms, 85.72% of 14886ms total Dropped 768 nodes (cum <= 74.43ms) flat flat% sum% cum cum% 0 0% 0% 14877ms 99.94% __libc_start_call_main 0 0% 0% 14877ms 99.94% __libc_start_main_impl 0 0% 0% 14877ms 99.94% _start 0 0% 0% 14875ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14875ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14875ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14875ms 99.93% main 0 0% 0% 14836ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14836ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14836ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14815ms 99.52% AbstractCardiacProblem::Solve 2ms 0.013% 0.013% 11447ms 76.90% AbstractDynamicLinearPdeSolver::Solve 46ms 0.31% 0.32% 9212ms 61.88% AbstractCardiacTissue::SolveCellSystems 147ms 0.99% 1.31% 5684ms 38.18% AbstractCardiacCell::ComputeExceptVoltage 184ms 1.24% 2.55% 4863ms 32.67% AbstractOneStepIvpOdeSolver::InternalSolve 196ms 1.32% 3.86% 4143ms 27.83% EulerIvpOdeSolver::CalculateNextYValue 919ms 6.17% 10.04% 3885ms 26.10% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1762ms 11.84% 21.87% 3545ms 23.81% __GI___exp 0 0% 21.87% 3295ms 22.13% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.88% 3159ms 21.22% H5Dwrite 0 0% 21.88% 3141ms 21.10% Hdf5DataWriter::PutVector 4ms 0.027% 21.91% 3127ms 21.01% H5D__write 106ms 0.71% 22.62% 2701ms 18.14% AbstractCardiacTissue::UpdateCaches (inline) 799ms 5.37% 27.99% 2552ms 17.14% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.99% 1825ms 12.26% H5D__chunk_collective_write 12ms 0.081% 28.07% 1825ms 12.26% H5F_set_coll_metadata_reads 1586ms 10.65% 38.72% 1699ms 11.41% __ieee754_exp_fma 21ms 0.14% 38.86% 1629ms 10.94% H5FD_s3comms_uriencode 3ms 0.02% 38.88% 1509ms 10.14% LinearSystem::Solve 0 0% 38.88% 1350ms 9.07% KSPSolve 6ms 0.04% 38.92% 1350ms 9.07% KSPSolve_Private 2ms 0.013% 38.94% 1340ms 9.00% KSPSolve_CG 6ms 0.04% 38.98% 1249ms 8.39% H5F_block_write 55ms 0.37% 39.35% 1248ms 8.38% 3ms 0.02% 39.37% 1243ms 8.35% H5PB_write 1ms 0.0067% 39.37% 1240ms 8.33% H5F__accum_write 1ms 0.0067% 39.38% 1239ms 8.32% H5FD_write 17ms 0.11% 39.49% 1189ms 7.99% H5D__chunk_cacheable 0 0% 39.49% 1148ms 7.71% H5D__mpio_select_write 423ms 2.84% 42.34% 1051ms 7.06% H5S_select_iterate 1ms 0.0067% 42.34% 1029ms 6.91% PMPI_File_write_at_all 1000ms 6.72% 49.06% 1004ms 6.74% __GI_pwritev64 5ms 0.034% 49.09% 940ms 6.31% std::pow (inline) 95ms 0.64% 49.73% 935ms 6.28% __pow 96ms 0.64% 50.38% 839ms 5.64% __ieee754_pow_fma 285ms 1.91% 52.29% 709ms 4.76% MonodomainSolver::SetupLinearSystem 2ms 0.013% 52.30% 680ms 4.57% PCApply 0 0% 52.30% 677ms 4.55% PCApply_BJacobi_Singleblock 74ms 0.5% 52.80% 647ms 4.35% H5D__chunk_set_sizes 0 0% 52.80% 647ms 4.35% KSPSolve_PREONLY 3ms 0.02% 52.82% 640ms 4.30% MatSolve 0 0% 52.82% 640ms 4.30% PCApply_ICC 627ms 4.21% 57.03% 637ms 4.28% MatSolve_SeqSBAIJ_1_NaturalOrdering 1ms 0.0067% 57.04% 636ms 4.27% MatMult 633ms 4.25% 61.29% 635ms 4.27% MatMult_SeqAIJ 299ms 2.01% 63.30% 630ms 4.23% CellLuoRudy1991FromCellML::VerifyStateVariables 61ms 0.41% 63.71% 478ms 3.21% H5S_mpio_space_type 1ms 0.0067% 63.72% 475ms 3.19% KSP_PCApply.lto_priv.7 395ms 2.65% 66.37% 395ms 2.65% log_inline (inline) 301ms 2.02% 68.39% 303ms 2.04% exp_inline (inline) 2ms 0.013% 68.41% 282ms 1.89% KSPConvergedDefault 129ms 0.87% 69.27% 256ms 1.72% TimeStepper::TimeStepper 42ms 0.28% 69.56% 224ms 1.50% __GI___libc_malloc 150ms 1.01% 70.56% 222ms 1.49% _int_malloc 0 0% 70.56% 208ms 1.40% KSP_PCApply 96ms 0.64% 71.21% 190ms 1.28% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 20ms 0.13% 71.34% 186ms 1.25% H5VM_chunk_index 32ms 0.21% 71.56% 176ms 1.18% AbstractCardiacCell::SetVoltage (partial-inline) 131ms 0.88% 72.44% 174ms 1.17% AbstractOneStepIvpOdeSolver::Solve 174ms 1.17% 73.61% 174ms 1.17% [libchaste_heart.so] 10ms 0.067% 73.67% 166ms 1.12% ompi_datatype_create 166ms 1.12% 74.79% 166ms 1.12% std::isinf (inline) 4ms 0.027% 74.82% 162ms 1.09% ompi_datatype_destroy 3ms 0.02% 74.84% 157ms 1.05% MPI_Type_free 101ms 0.68% 75.51% 157ms 1.05% top12 (inline) 1ms 0.0067% 75.52% 154ms 1.03% Hdf5DataWriter::PutUnlimitedVariable 136ms 0.91% 76.43% 151ms 1.01% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 27ms 0.18% 76.62% 149ms 1.00% __GI___libc_free 146ms 0.98% 77.60% 146ms 0.98% ddot_ 8ms 0.054% 77.65% 141ms 0.95% ompi_info_register_framework_params 24ms 0.16% 77.81% 139ms 0.93% H5S_set_version 35ms 0.24% 78.05% 139ms 0.93% ompi_datatype_release_args 3ms 0.02% 78.07% 134ms 0.9% VecDuplicate 3ms 0.02% 78.09% 133ms 0.89% PMPI_File_set_view 1ms 0.0067% 78.09% 131ms 0.88% VecDuplicate_MPI 128ms 0.86% 78.95% 128ms 0.86% TimeStepper::CalculateNextTime 108ms 0.73% 79.68% 120ms 0.81% AbstractParameterisedSystem::SetAnyVariable 60ms 0.4% 80.08% 119ms 0.8% _int_free 62ms 0.42% 80.50% 116ms 0.78% H5S_hyper_add_span_element 1ms 0.0067% 80.51% 116ms 0.78% PMPI_Type_create_resized 52ms 0.35% 80.85% 115ms 0.77% H5VM_array_calc 115ms 0.77% 81.63% 115ms 0.77% __ieee754_log_fma 2ms 0.013% 81.64% 107ms 0.72% ompi_datatype_duplicate 41ms 0.28% 81.92% 106ms 0.71% std::__cxx11::basic_string::basic_string 0 0% 81.92% 104ms 0.7% VecNorm 2ms 0.013% 81.93% 97ms 0.65% VecNorm_Seq 75ms 0.5% 82.43% 96ms 0.64% AbstractParameterisedSystem::GetAnyVariable 95ms 0.64% 83.07% 95ms 0.64% __memcpy_avx_unaligned_erms 3ms 0.02% 83.09% 89ms 0.6% VecCreate 1ms 0.0067% 83.10% 88ms 0.59% VecTDot 86ms 0.58% 83.68% 86ms 0.58% H5VM_chunk_index_scaled 85ms 0.57% 84.25% 85ms 0.57% [libm.so.6] 2ms 0.013% 84.26% 83ms 0.56% H5D__chunk_allocated 83ms 0.56% 84.82% 83ms 0.56% H5VM_array_offset_pre 5ms 0.034% 84.85% 83ms 0.56% PetscMallocA 0 0% 84.85% 83ms 0.56% VecTDot_Seq 1ms 0.0067% 84.86% 83ms 0.56% VecXDot_Seq_Private.constprop.0 46ms 0.31% 85.17% 82ms 0.55% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 85.17% 79ms 0.53% H5D__select_write 1ms 0.0067% 85.17% 79ms 0.53% H5Dgather 3ms 0.02% 85.19% 78ms 0.52% PetscMallocAlign 1ms 0.0067% 85.20% 77ms 0.52% H5D__contig_fill 28ms 0.19% 85.39% 76ms 0.51% H5S_select_iter_next 2ms 0.013% 85.40% 76ms 0.51% H5VM_opvv 3ms 0.02% 85.42% 76ms 0.51% PMPI_Type_vector 17ms 0.11% 85.54% 76ms 0.51% __libc_calloc 27ms 0.18% 85.72% 76ms 0.51% ompi_datatype_set_args