File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 296ms, 91.36% of 324ms total Dropped 127 nodes (cum <= 1.62ms) flat flat% sum% cum cum% 0 0% 0% 318ms 98.15% __libc_start_call_main 0 0% 0% 318ms 98.15% __libc_start_main_impl 0 0% 0% 318ms 98.15% _start 0 0% 0% 316ms 97.53% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 316ms 97.53% CxxTest::TestRunner::runAllTests 0 0% 0% 316ms 97.53% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 316ms 97.53% main 0 0% 0% 283ms 87.35% CxxTest::RealTestDescription::run 0 0% 0% 283ms 87.35% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 283ms 87.35% CxxTest::TestRunner::runTest (inline) 0 0% 0% 283ms 87.35% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 283ms 87.35% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 280ms 86.42% AbstractCardiacProblem::Solve 0 0% 0% 280ms 86.42% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 245ms 75.62% KSPSolve 0 0% 0% 245ms 75.62% KSPSolve_CG 0 0% 0% 245ms 75.62% KSPSolve_Private 0 0% 0% 245ms 75.62% LinearSystem::Solve 0 0% 0% 153ms 47.22% KSP_PCApply.lto_priv.7 0 0% 0% 146ms 45.06% PCApply 0 0% 0% 146ms 45.06% PCApply_BJacobi_Singleblock 0 0% 0% 126ms 38.89% KSPSolve_PREONLY (partial-inline) 0 0% 0% 116ms 35.80% MatSolve 114ms 35.19% 35.19% 116ms 35.80% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.19% 116ms 35.80% PCApply_ICC 0 0% 35.19% 42ms 12.96% MatMult 0 0% 35.19% 42ms 12.96% MatMult_SeqAIJ 42ms 12.96% 48.15% 42ms 12.96% MatMult_SeqAIJ_Inode (inline) 0 0% 48.15% 34ms 10.49% MatNullSpaceRemove 0 0% 48.15% 32ms 9.88% AbstractCardiacTissue::SolveCellSystems 0 0% 48.15% 30ms 9.26% CxxTest::RealWorldDescription::setUp 0 0% 48.15% 30ms 9.26% PMPI_Init_thread 0 0% 48.15% 30ms 9.26% PetscInitialize 0 0% 48.15% 30ms 9.26% PetscSetup::setUpWorld 0 0% 48.15% 30ms 9.26% PetscSetupUtils::CommonSetup 0 0% 48.15% 30ms 9.26% PetscSetupUtils::InitialisePetsc 0 0% 48.15% 30ms 9.26% ompi_mpi_init 27ms 8.33% 56.48% 27ms 8.33% ddot_ 2ms 0.62% 57.10% 25ms 7.72% 2ms 0.62% 57.72% 22ms 6.79% AbstractCardiacCell::ComputeExceptVoltage 0 0% 57.72% 20ms 6.17% VecMAXPY 20ms 6.17% 63.89% 20ms 6.17% VecMAXPY_Seq 0 0% 63.89% 20ms 6.17% VecTDot 0 0% 63.89% 20ms 6.17% VecTDot_Seq 0 0% 63.89% 20ms 6.17% VecXDot_Seq_Private.constprop.0 0 0% 63.89% 19ms 5.86% orte_init 0 0% 63.89% 15ms 4.63% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 63.89% 14ms 4.32% KSP_PCApply (partial-inline) 0 0% 63.89% 14ms 4.32% VecMDot 13ms 4.01% 67.90% 14ms 4.32% VecMDot_Seq 0 0% 67.90% 14ms 4.32% VecMXDot_Private 5ms 1.54% 69.44% 13ms 4.01% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.44% 13ms 4.01% EulerIvpOdeSolver::CalculateNextYValue 0 0% 69.44% 13ms 4.01% VecAYPX 13ms 4.01% 73.46% 13ms 4.01% VecAYPX_Seq 0 0% 73.46% 13ms 4.01% hwloc_topology_load 0 0% 73.46% 12ms 3.70% hwloc_linux_get_tid_last_cpu_location 3ms 0.93% 74.38% 11ms 3.40% __GI___exp 0 0% 74.38% 10ms 3.09% __GI__dl_catch_exception 0 0% 74.38% 10ms 3.09% _dl_catch_error 0 0% 74.38% 10ms 3.09% _dlerror_run 0 0% 74.38% 10ms 3.09% mca_base_framework_open 0 0% 74.38% 9ms 2.78% ___dlopen 0 0% 74.38% 9ms 2.78% _dl_init 0 0% 74.38% 9ms 2.78% _dl_open 0 0% 74.38% 9ms 2.78% call_init (inline) 0 0% 74.38% 9ms 2.78% dl_open_worker 0 0% 74.38% 9ms 2.78% dlopen_doit 0 0% 74.38% 9ms 2.78% dlopen_implementation (inline) 0 0% 74.38% 9ms 2.78% mca_base_framework_components_register 0 0% 74.38% 9ms 2.78% mca_base_framework_register 0 0% 74.38% 9ms 2.78% opal_stackframe_output 0 0% 74.38% 8ms 2.47% mca_base_component_find 0 0% 74.38% 8ms 2.47% mca_base_component_repository_open 0 0% 74.38% 7ms 2.16% VecNorm 0 0% 74.38% 7ms 2.16% VecNorm_Seq 7ms 2.16% 76.54% 7ms 2.16% __ieee754_exp_fma 6ms 1.85% 78.40% 6ms 1.85% __GI___libc_read 0 0% 78.40% 6ms 1.85% _dl_start_user 0 0% 78.40% 6ms 1.85% dl_open_worker_begin 0 0% 78.40% 5ms 1.54% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.62% 79.01% 5ms 1.54% CellLuoRudy1991FromCellML::GetIIonic 0 0% 79.01% 5ms 1.54% KSPConvergedDefault 0 0% 79.01% 5ms 1.54% VecAXPY 0 0% 79.01% 5ms 1.54% VecAXPY_Seq 0 0% 79.01% 5ms 1.54% VecCreate 0 0% 79.01% 5ms 1.54% VecDuplicate 0 0% 79.01% 5ms 1.54% VecDuplicate_Seq 0 0% 79.01% 5ms 1.54% _dl_lookup_symbol_x 5ms 1.54% 80.56% 5ms 1.54% daxpy_ 0 0% 80.56% 5ms 1.54% mca_base_framework_components_open 0 0% 80.56% 5ms 1.54% mca_topo_base_dist_graph_neighbors_count 0 0% 80.56% 5ms 1.54% opal_hwloc_base_get_topology 0 0% 80.56% 5ms 1.54% orte_ess_base_proc_binding 4ms 1.23% 81.79% 4ms 1.23% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 81.79% 4ms 1.23% _dl_open_relocate_one_object (inline) 0 0% 81.79% 4ms 1.23% _dl_relocate_object 1ms 0.31% 82.10% 4ms 1.23% _dl_runtime_resolve_xsavec 0 0% 82.10% 4ms 1.23% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.10% 4ms 1.23% boost::serialization::singleton::get_instance 3ms 0.93% 83.02% 4ms 1.23% do_lookup_x 0 0% 83.02% 3ms 0.93% AbstractCardiacProblem::Initialise 2ms 0.62% 83.64% 3ms 0.93% AbstractOneStepIvpOdeSolver::Solve 1ms 0.31% 83.95% 3ms 0.93% BidomainSolver::SetupLinearSystem 0 0% 83.95% 3ms 0.93% CxxTest::RealWorldDescription::tearDown 0 0% 83.95% 3ms 0.93% PetscFinalize 0 0% 83.95% 3ms 0.93% PetscMallocA 0 0% 83.95% 3ms 0.93% PetscMallocAlign 0 0% 83.95% 3ms 0.93% PetscSetup::tearDownWorld 0 0% 83.95% 3ms 0.93% PetscSetupUtils::CommonFinalize 3ms 0.93% 84.88% 3ms 0.93% __GI___clock_nanosleep 3ms 0.93% 85.80% 3ms 0.93% __GI___libc_malloc 0 0% 85.80% 3ms 0.93% __GI___nanosleep 1ms 0.31% 86.11% 3ms 0.93% __cxa_finalize 3ms 0.93% 87.04% 3ms 0.93% __libc_openat64 3ms 0.93% 87.96% 3ms 0.93% __memcpy_avx512_unaligned_erms 0 0% 87.96% 3ms 0.93% __posix_memalign 0 0% 87.96% 3ms 0.93% _dl_call_fini 0 0% 87.96% 3ms 0.93% _dl_fixup 1ms 0.31% 88.27% 3ms 0.93% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 88.27% 3ms 0.93% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.27% 3ms 0.93% ompi_mpi_finalize 0 0% 88.27% 3ms 0.93% usleep 0 0% 88.27% 2ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 88.27% 2ms 0.62% PMPI_Comm_get_attr 0 0% 88.27% 2ms 0.62% PetscCommDuplicate 0 0% 88.27% 2ms 0.62% PetscHeaderCreate_Private 0 0% 88.27% 2ms 0.62% PetscMemcpy (inline) 0 0% 88.27% 2ms 0.62% VecDestroy 2ms 0.62% 88.89% 2ms 0.62% [libchaste_heart.so] 0 0% 88.89% 2ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 88.89% 2ms 0.62% __GI_exit 2ms 0.62% 89.51% 2ms 0.62% __GI_mprotect 0 0% 89.51% 2ms 0.62% ___pthread_mutex_lock 0 0% 89.51% 2ms 0.62% __run_exit_handlers 2ms 0.62% 90.12% 2ms 0.62% __strcmp_evex 0 0% 90.12% 2ms 0.62% _dl_fini 0 0% 90.12% 2ms 0.62% _dl_map_object 0 0% 90.12% 2ms 0.62% _dl_protect_relro (inline) 0 0% 90.12% 2ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 90.12% 2ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 90.12% 2ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 90.12% 2ms 0.62% elf_machine_rela (inline) 2ms 0.62% 90.74% 2ms 0.62% lll_mutex_lock_optimized (inline) 0 0% 90.74% 2ms 0.62% mca_base_framework_close 0 0% 90.74% 2ms 0.62% ompi_attr_get_c 0 0% 90.74% 2ms 0.62% resolve_map (inline) 2ms 0.62% 91.36% 2ms 0.62% strcmp