File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 3340ms, 88.57% of 3771ms total Dropped 434 nodes (cum <= 18.86ms) flat flat% sum% cum cum% 0 0% 0% 3764ms 99.81% __libc_start_call_main 0 0% 0% 3764ms 99.81% __libc_start_main_impl 0 0% 0% 3764ms 99.81% _start 0 0% 0% 3762ms 99.76% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 3762ms 99.76% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 3762ms 99.76% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 3762ms 99.76% main 0 0% 0% 3732ms 98.97% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 3732ms 98.97% CxxTest::TestRunner::runTest (inline) 0 0% 0% 3732ms 98.97% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 3726ms 98.81% AbstractCardiacProblem::Solve 1ms 0.027% 0.027% 3712ms 98.44% AbstractDynamicLinearPdeSolver::Solve 19ms 0.5% 0.53% 1901ms 50.41% AbstractCardiacTissue::SolveCellSystems 1ms 0.027% 0.56% 1445ms 38.32% LinearSystem::Solve 0 0% 0.56% 1414ms 37.50% KSPSolve 1ms 0.027% 0.58% 1414ms 37.50% KSPSolve_Private 3ms 0.08% 0.66% 1377ms 36.52% KSPSolve_SYMMLQ 14ms 0.37% 1.03% 1076ms 28.53% AbstractCardiacCell::ComputeExceptVoltage 20ms 0.53% 1.56% 964ms 25.56% AbstractOneStepIvpOdeSolver::InternalSolve 88ms 2.33% 3.90% 821ms 21.77% EulerIvpOdeSolver::CalculateNextYValue 2ms 0.053% 3.95% 773ms 20.50% PCApply 1ms 0.027% 3.98% 768ms 20.37% PCApply_BJacobi_Singleblock 257ms 6.82% 10.79% 728ms 19.31% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.79% 660ms 17.50% KSPSolve_PREONLY (partial-inline) 18ms 0.48% 11.27% 649ms 17.21% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.08% 11.35% 622ms 16.49% MatSolve 0 0% 11.35% 622ms 16.49% PCApply_ICC 2ms 0.053% 11.40% 619ms 16.41% MatMult 611ms 16.20% 27.61% 615ms 16.31% MatSolve_SeqSBAIJ_1_NaturalOrdering 269ms 7.13% 34.74% 610ms 16.18% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.053% 34.79% 610ms 16.18% MatMult_SeqAIJ 606ms 16.07% 50.86% 610ms 16.18% MatMult_SeqAIJ_Inode (inline) 219ms 5.81% 56.67% 552ms 14.64% __GI___exp 0 0% 56.67% 524ms 13.90% KSP_PCApply.lto_priv.18 41ms 1.09% 57.76% 340ms 9.02% BidomainSolver::SetupLinearSystem 0 0% 57.76% 306ms 8.11% KSPConvergedDefault 0 0% 57.76% 301ms 7.98% KSP_PCApply (partial-inline) 276ms 7.32% 65.08% 278ms 7.37% __ieee754_exp_fma 4ms 0.11% 65.18% 186ms 4.93% std::pow (inline) 10ms 0.27% 65.45% 181ms 4.80% __pow 10ms 0.27% 65.71% 171ms 4.53% __ieee754_pow_fma 86ms 2.28% 67.99% 132ms 3.50% CellLuoRudy1991FromCellML::VerifyStateVariables 116ms 3.08% 71.07% 116ms 3.08% [libchaste_heart.so] 1ms 0.027% 71.10% 99ms 2.63% MatNullSpaceRemove 23ms 0.61% 71.71% 92ms 2.44% MPI_Wtime 89ms 2.36% 74.07% 89ms 2.36% log_inline (inline) 21ms 0.56% 74.62% 71ms 1.88% TimeStepper::TimeStepper 63ms 1.67% 76.29% 70ms 1.86% exp_inline (inline) 0 0% 76.29% 65ms 1.72% VecDuplicate 5ms 0.13% 76.43% 65ms 1.72% __GI___clock_gettime 60ms 1.59% 78.02% 60ms 1.59% [[vdso]] 59ms 1.56% 79.58% 59ms 1.56% TimeStepper::CalculateNextTime 0 0% 79.58% 58ms 1.54% VecMDot 5ms 0.13% 79.71% 58ms 1.54% VecMXDot_Private 2ms 0.053% 79.77% 57ms 1.51% PetscLogEventBeginDefault 55ms 1.46% 81.23% 55ms 1.46% [libm.so.6] 53ms 1.41% 82.63% 53ms 1.41% ddot_ 7ms 0.19% 82.82% 47ms 1.25% PetscLogEventEndDefault 2ms 0.053% 82.87% 46ms 1.22% VecDot 4ms 0.11% 82.98% 42ms 1.11% VecCopy 39ms 1.03% 84.01% 41ms 1.09% VecMDot_Seq 2ms 0.053% 84.06% 40ms 1.06% VecMAXPY 2ms 0.053% 84.12% 37ms 0.98% VecDestroy 1ms 0.027% 84.14% 37ms 0.98% VecDuplicate_MPI 0 0% 84.14% 35ms 0.93% VecDot_Seq 1ms 0.027% 84.17% 35ms 0.93% VecXDot_Seq_Private.constprop.0 0 0% 84.17% 32ms 0.85% VecNorm 2ms 0.053% 84.22% 30ms 0.8% VecAXPY 1ms 0.027% 84.25% 30ms 0.8% VecNorm_Seq 0 0% 84.25% 28ms 0.74% VecDuplicate_Seq 3ms 0.08% 84.33% 27ms 0.72% PetscMallocA 24ms 0.64% 84.96% 26ms 0.69% AbstractOneStepIvpOdeSolver::Solve 0 0% 84.96% 26ms 0.69% CxxTest::RealWorldDescription::setUp 0 0% 84.96% 26ms 0.69% PMPI_Init_thread 0 0% 84.96% 26ms 0.69% PetscInitialize 0 0% 84.96% 26ms 0.69% PetscSetup::setUpWorld 0 0% 84.96% 26ms 0.69% PetscSetupUtils::CommonSetup 0 0% 84.96% 26ms 0.69% PetscSetupUtils::InitialisePetsc 8ms 0.21% 85.18% 26ms 0.69% TimeStepper::AdvanceOneTimeStep 0 0% 85.18% 26ms 0.69% ompi_mpi_init 14ms 0.37% 85.55% 26ms 0.69% std::__cxx11::basic_string::basic_string 18ms 0.48% 86.02% 25ms 0.66% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 86.02% 25ms 0.66% VecCreate 4ms 0.11% 86.13% 24ms 0.64% PetscMallocAlign 24ms 0.64% 86.77% 24ms 0.64% __memcpy_avx512_unaligned_erms 0 0% 86.77% 23ms 0.61% 6ms 0.16% 86.93% 23ms 0.61% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 2ms 0.053% 86.98% 22ms 0.58% AbstractCardiacCell::SetVoltage (partial-inline) 21ms 0.56% 87.54% 22ms 0.58% VecMAXPY_Seq 3ms 0.08% 87.62% 21ms 0.56% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 87.62% 21ms 0.56% AbstractBidomainSolver::FinaliseLinearSystem 16ms 0.42% 88.04% 20ms 0.53% AbstractParameterisedSystem::GetAnyVariable 1ms 0.027% 88.07% 20ms 0.53% VecCreate_MPI_Private 0 0% 88.07% 20ms 0.53% VecNorm_MPI 0 0% 88.07% 20ms 0.53% VecNorm_MPI_Default.constprop.0 0 0% 88.07% 19ms 0.5% PetscMemcpy (inline) 19ms 0.5% 88.57% 19ms 0.5% [libchaste_ode.so]