File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12999ms, 89.80% of 14476ms total Dropped 699 nodes (cum <= 72.38ms) flat flat% sum% cum cum% 0 0% 0% 14468ms 99.94% __libc_start_call_main 0 0% 0% 14468ms 99.94% __libc_start_main_impl 0 0% 0% 14468ms 99.94% _start 0 0% 0% 14465ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14465ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14465ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14465ms 99.92% main 0 0% 0% 14424ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14424ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14424ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0069% 0.0069% 14402ms 99.49% AbstractCardiacProblem::Solve 0 0% 0.0069% 11211ms 77.45% AbstractDynamicLinearPdeSolver::Solve 103ms 0.71% 0.72% 8761ms 60.52% AbstractCardiacTissue::SolveCellSystems 82ms 0.57% 1.28% 5408ms 37.36% AbstractCardiacCell::ComputeExceptVoltage 117ms 0.81% 2.09% 4907ms 33.90% AbstractOneStepIvpOdeSolver::InternalSolve 135ms 0.93% 3.03% 4145ms 28.63% EulerIvpOdeSolver::CalculateNextYValue 1050ms 7.25% 10.28% 3973ms 27.45% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1210ms 8.36% 18.64% 3164ms 21.86% __GI___exp 0 0% 18.64% 3144ms 21.72% MonodomainProblem::WriteOneStep 0 0% 18.64% 3091ms 21.35% Hdf5DataWriter::PutVector 2ms 0.014% 18.65% 3066ms 21.18% H5Dwrite 1ms 0.0069% 18.66% 3051ms 21.08% H5D__write 99ms 0.68% 19.34% 2446ms 16.90% AbstractCardiacTissue::UpdateCaches (inline) 654ms 4.52% 23.86% 2285ms 15.78% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.86% 1979ms 13.67% H5D__chunk_collective_write 10ms 0.069% 23.93% 1979ms 13.67% H5F_set_coll_metadata_reads 10ms 0.069% 24.00% 1723ms 11.90% H5FD_s3comms_uriencode 1654ms 11.43% 35.42% 1685ms 11.64% __ieee754_exp_fma 1ms 0.0069% 35.43% 1559ms 10.77% LinearSystem::Solve 1ms 0.0069% 35.44% 1468ms 10.14% KSPSolve 5ms 0.035% 35.47% 1467ms 10.13% KSPSolve_Private 2ms 0.014% 35.49% 1460ms 10.09% KSPSolve_CG 21ms 0.15% 35.63% 1437ms 9.93% 0 0% 35.63% 1413ms 9.76% H5F_block_write 1ms 0.0069% 35.64% 1413ms 9.76% H5PB_write 0 0% 35.64% 1412ms 9.75% H5FD_write 0 0% 35.64% 1412ms 9.75% H5F__accum_write 0 0% 35.64% 1365ms 9.43% H5D__mpio_select_write 0 0% 35.64% 1311ms 9.06% PMPI_File_write_at_all 1284ms 8.87% 44.51% 1292ms 8.93% __GI_pwritev64 5ms 0.035% 44.54% 1033ms 7.14% H5D__chunk_cacheable 309ms 2.13% 46.68% 936ms 6.47% H5S_select_iterate 24ms 0.17% 46.84% 933ms 6.45% std::pow (inline) 40ms 0.28% 47.12% 903ms 6.24% __pow 288ms 1.99% 49.11% 876ms 6.05% MonodomainSolver::SetupLinearSystem 33ms 0.23% 49.34% 848ms 5.86% __ieee754_pow_fma 2ms 0.014% 49.35% 769ms 5.31% PCApply 1ms 0.0069% 49.36% 764ms 5.28% PCApply_BJacobi_Singleblock 3ms 0.021% 49.38% 751ms 5.19% MatMult 747ms 5.16% 54.54% 748ms 5.17% MatMult_SeqAIJ 0 0% 54.54% 731ms 5.05% KSPSolve_PREONLY 1ms 0.0069% 54.55% 730ms 5.04% PCApply_ICC 1ms 0.0069% 54.55% 729ms 5.04% MatSolve 723ms 4.99% 59.55% 728ms 5.03% MatSolve_SeqSBAIJ_1_NaturalOrdering 423ms 2.92% 62.47% 658ms 4.55% CellLuoRudy1991FromCellML::VerifyStateVariables 67ms 0.46% 62.93% 636ms 4.39% H5D__chunk_set_sizes 615ms 4.25% 67.18% 615ms 4.25% [libchaste_heart.so] 0 0% 67.18% 501ms 3.46% KSP_PCApply.lto_priv.7 358ms 2.47% 69.65% 407ms 2.81% exp_inline (inline) 397ms 2.74% 72.40% 397ms 2.74% log_inline (inline) 48ms 0.33% 72.73% 382ms 2.64% H5S_mpio_space_type 115ms 0.79% 73.52% 334ms 2.31% TimeStepper::TimeStepper 0 0% 73.52% 318ms 2.20% KSPConvergedDefault 292ms 2.02% 75.54% 292ms 2.02% [libm.so.6] 0 0% 75.54% 268ms 1.85% KSP_PCApply 29ms 0.2% 75.74% 265ms 1.83% H5VM_chunk_index 209ms 1.44% 77.18% 209ms 1.44% H5VM_chunk_index_scaled 207ms 1.43% 78.61% 207ms 1.43% TimeStepper::CalculateNextTime 19ms 0.13% 78.74% 205ms 1.42% ompi_datatype_destroy 4ms 0.028% 78.77% 203ms 1.40% MPI_Type_free 79ms 0.55% 79.32% 190ms 1.31% __GI___libc_malloc 55ms 0.38% 79.70% 177ms 1.22% ompi_datatype_release_args 3ms 0.021% 79.72% 177ms 1.22% ompi_info_register_framework_params 21ms 0.15% 79.86% 173ms 1.20% __GI___libc_free 32ms 0.22% 80.08% 157ms 1.08% AbstractCardiacCell::SetVoltage (partial-inline) 95ms 0.66% 80.74% 152ms 1.05% _int_free 10ms 0.069% 80.81% 150ms 1.04% ompi_datatype_create 105ms 0.73% 81.53% 137ms 0.95% _int_malloc 136ms 0.94% 82.47% 136ms 0.94% [libchaste_ode.so] 54ms 0.37% 82.85% 135ms 0.93% std::__cxx11::basic_string::basic_string 134ms 0.93% 83.77% 134ms 0.93% ddot_ 24ms 0.17% 83.94% 121ms 0.84% H5S_set_version 118ms 0.82% 84.75% 118ms 0.82% __ieee754_log_fma 78ms 0.54% 85.29% 108ms 0.75% AbstractOneStepIvpOdeSolver::Solve 65ms 0.45% 85.74% 104ms 0.72% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 43ms 0.3% 86.04% 97ms 0.67% H5VM_array_calc 49ms 0.34% 86.38% 94ms 0.65% H5S_hyper_add_span_element 89ms 0.61% 86.99% 89ms 0.61% __memcpy_avx512_unaligned_erms 0 0% 86.99% 82ms 0.57% PMPI_Type_create_resized 0 0% 86.99% 82ms 0.57% VecDuplicate 1ms 0.0069% 87.00% 82ms 0.57% VecDuplicate_MPI 53ms 0.37% 87.37% 81ms 0.56% TimeStepper::AdvanceOneTimeStep 46ms 0.32% 87.68% 81ms 0.56% __libc_calloc 80ms 0.55% 88.24% 80ms 0.55% asuint64 (inline) 0 0% 88.24% 80ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 88.24% 80ms 0.55% std::vector::assign (inline) 0 0% 88.24% 79ms 0.55% VecNorm 1ms 0.0069% 88.24% 77ms 0.53% PMPI_File_set_view 31ms 0.21% 88.46% 77ms 0.53% ompi_datatype_set_args 40ms 0.28% 88.73% 77ms 0.53% std::char_traits::length (inline) 76ms 0.53% 89.26% 76ms 0.53% ReplicatableVector::operator[] 2ms 0.014% 89.27% 75ms 0.52% VecNorm_Seq 0 0% 89.27% 75ms 0.52% VecTDot 0 0% 89.27% 75ms 0.52% VecTDot_Seq 1ms 0.0069% 89.28% 75ms 0.52% VecXDot_Seq_Private.constprop.0 0 0% 89.28% 74ms 0.51% ompi_datatype_duplicate 22ms 0.15% 89.43% 73ms 0.5% AbstractCardiacCell::GetVoltage 53ms 0.37% 89.80% 73ms 0.5% AbstractParameterisedSystem::SetAnyVariable