File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 111770ms, 91.96% of 121536ms total Dropped 1145 nodes (cum <= 607.68ms) flat flat% sum% cum cum% 0 0% 0% 121522ms 100% __libc_start_call_main 0 0% 0% 121522ms 100% __libc_start_main_impl 0 0% 0% 121522ms 100% _start 0 0% 0% 121519ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 121519ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 121519ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 121519ms 100% main 0 0% 0% 121483ms 100% AbstractConvergenceTester::Converge 0 0% 0% 121483ms 100% CxxTest::RealTestDescription::run 0 0% 0% 121483ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 121483ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 121483ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 121483ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0025% 0.0025% 120221ms 98.92% AbstractCardiacProblem::Solve 6ms 0.0049% 0.0074% 119431ms 98.27% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0041% 0.012% 67643ms 55.66% LinearSystem::Solve 6ms 0.0049% 0.016% 67132ms 55.24% KSPSolve 15ms 0.012% 0.029% 67126ms 55.23% KSPSolve_Private 15ms 0.012% 0.041% 66689ms 54.87% KSPSolve_SYMMLQ 203ms 0.17% 0.21% 42847ms 35.25% AbstractCardiacTissue::SolveCellSystems 1ms 0.00082% 0.21% 37743ms 31.05% PCApply 2ms 0.0016% 0.21% 37736ms 31.05% PCApply_BJacobi_Singleblock 1ms 0.00082% 0.21% 34868ms 28.69% KSPSolve_PREONLY (partial-inline) 5ms 0.0041% 0.22% 33752ms 27.77% PCApply_ICC 11ms 0.0091% 0.22% 33747ms 27.77% MatSolve 33218ms 27.33% 27.56% 33736ms 27.76% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1432ms 1.18% 28.73% 33100ms 27.23% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 28.74% 32644ms 26.86% KSP_PCApply.lto_priv.18 6952ms 5.72% 34.46% 28624ms 23.55% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 14ms 0.012% 34.47% 22763ms 18.73% MatMult 212ms 0.17% 34.64% 22749ms 18.72% MatMult_SeqAIJ (partial-inline) 22242ms 18.30% 52.94% 22749ms 18.72% MatMult_SeqAIJ_Inode (inline) 1864ms 1.53% 54.48% 14735ms 12.12% CardiacNewtonSolver::Solve 310ms 0.26% 54.73% 8946ms 7.36% AbstractCardiacTissue::UpdateCaches (inline) 4501ms 3.70% 58.44% 8706ms 7.16% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1940ms 1.60% 60.03% 8416ms 6.92% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1070ms 0.88% 60.91% 7886ms 6.49% BidomainSolver::SetupLinearSystem 1064ms 0.88% 61.79% 7340ms 6.04% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 61.79% 7100ms 5.84% KSP_PCApply (partial-inline) 9ms 0.0074% 61.79% 6519ms 5.36% KSPConvergedDefault 6015ms 4.95% 66.74% 6015ms 4.95% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3917ms 3.22% 69.97% 3954ms 3.25% __ieee754_log_fma 0 0% 69.97% 3786ms 3.12% boost::numeric::ublas::norm_inf (inline) 2501ms 2.06% 72.02% 3786ms 3.12% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.02% 3786ms 3.12% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.02% 3786ms 3.12% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0058% 72.03% 3421ms 2.81% MatNullSpaceRemove 3393ms 2.79% 74.82% 3393ms 2.79% __memcpy_avx_unaligned_erms 0 0% 74.82% 3349ms 2.76% PetscMemcpy (inline) 29ms 0.024% 74.85% 3219ms 2.65% std::pow (inline) 375ms 0.31% 75.15% 3188ms 2.62% __pow 29ms 0.024% 75.18% 2876ms 2.37% VecCopy 1743ms 1.43% 76.61% 2858ms 2.35% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 5ms 0.0041% 76.62% 2847ms 2.34% VecCopy_Seq (partial-inline) 374ms 0.31% 76.92% 2804ms 2.31% __ieee754_pow_fma 2763ms 2.27% 79.20% 2763ms 2.27% ddot_ 17ms 0.014% 79.21% 2714ms 2.23% VecAXPY 6ms 0.0049% 79.22% 2697ms 2.22% VecAXPY_Seq 2676ms 2.20% 81.42% 2676ms 2.20% daxpy_ 5ms 0.0041% 81.42% 2280ms 1.88% VecDot 0 0% 81.42% 2275ms 1.87% VecDot_Seq 1ms 0.00082% 81.42% 2275ms 1.87% VecXDot_Seq_Private.constprop.0 4ms 0.0033% 81.43% 2078ms 1.71% AbstractFeVolumeIntegralAssembler::DoAssemble 4ms 0.0033% 81.43% 2038ms 1.68% VecMDot 12ms 0.0099% 81.44% 2034ms 1.67% VecMXDot_Private 2006ms 1.65% 83.09% 2018ms 1.66% VecMDot_Seq 35ms 0.029% 83.12% 1711ms 1.41% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1635ms 1.35% 84.46% 1703ms 1.40% exp_inline (inline) 1519ms 1.25% 85.71% 1519ms 1.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 85.71% 1425ms 1.17% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1392ms 1.15% 86.86% 1392ms 1.15% __memset_avx2_unaligned_erms 0 0% 86.86% 1378ms 1.13% PetscMemzero (inline) 10ms 0.0082% 86.87% 1376ms 1.13% VecMAXPY 1363ms 1.12% 87.99% 1366ms 1.12% VecMAXPY_Seq 0 0% 87.99% 1203ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.99% 1203ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.99% 1203ms 0.99% boost_numeric_ublas_abs (inline) 1203ms 0.99% 88.98% 1203ms 0.99% std::abs (inline) 6ms 0.0049% 88.98% 1132ms 0.93% boost::numeric::ublas::matrix_assign (inline) 215ms 0.18% 89.16% 1119ms 0.92% boost::numeric::ublas::indexing_matrix_assign 0 0% 89.16% 1117ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.16% 1117ms 0.92% CuboidMeshConstructor::Construct 6ms 0.0049% 89.17% 1117ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 1ms 0.00082% 89.17% 1093ms 0.9% VecDuplicate 810ms 0.67% 89.83% 1060ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0016% 89.84% 1022ms 0.84% Element::Element 2ms 0.0016% 89.84% 988ms 0.81% AbstractTetrahedralElement::CalculateJacobian 0 0% 89.84% 948ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 12ms 0.0099% 89.85% 931ms 0.77% PetscMallocA 5ms 0.0041% 89.85% 919ms 0.76% PetscMallocAlign (partial-inline) 9ms 0.0074% 89.86% 875ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0016% 89.86% 874ms 0.72% BidomainAssembler::ComputeMatrixTerm 14ms 0.012% 89.87% 826ms 0.68% VecScale 818ms 0.67% 90.54% 818ms 0.67% [libchaste_heart.so] 1ms 0.00082% 90.55% 812ms 0.67% VecScale_Seq 807ms 0.66% 91.21% 807ms 0.66% dscal_ 0 0% 91.21% 741ms 0.61% VecNorm 0 0% 91.21% 735ms 0.6% VecNorm_Seq 0 0% 91.21% 733ms 0.6% BidomainProblem::WriteOneStep 0 0% 91.21% 720ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 222ms 0.18% 91.39% 719ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 6ms 0.0049% 91.40% 704ms 0.58% VecDuplicate_Seq 684ms 0.56% 91.96% 684ms 0.56% log_inline (inline) 0 0% 91.96% 653ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 6ms 0.0049% 91.96% 617ms 0.51% VecSetType