File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12790ms, 85.31% of 14993ms total Dropped 778 nodes (cum <= 74.97ms) flat flat% sum% cum cum% 0 0% 0% 14982ms 99.93% __libc_start_call_main 0 0% 0% 14982ms 99.93% __libc_start_main_impl 0 0% 0% 14982ms 99.93% _start 0 0% 0% 14980ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14980ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14980ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14980ms 99.91% main 0 0% 0% 14943ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14943ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14943ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14921ms 99.52% AbstractCardiacProblem::Solve 1ms 0.0067% 0.013% 11505ms 76.74% AbstractDynamicLinearPdeSolver::Solve 51ms 0.34% 0.35% 9265ms 61.80% AbstractCardiacTissue::SolveCellSystems 163ms 1.09% 1.44% 5663ms 37.77% AbstractCardiacCell::ComputeExceptVoltage 173ms 1.15% 2.59% 4839ms 32.28% AbstractOneStepIvpOdeSolver::InternalSolve 184ms 1.23% 3.82% 4129ms 27.54% EulerIvpOdeSolver::CalculateNextYValue 910ms 6.07% 9.89% 3894ms 25.97% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1689ms 11.27% 21.16% 3593ms 23.96% __GI___exp 1ms 0.0067% 21.16% 3343ms 22.30% MonodomainProblem::WriteOneStep 5ms 0.033% 21.20% 3163ms 21.10% Hdf5DataWriter::PutVector 4ms 0.027% 21.22% 3154ms 21.04% H5Dwrite 3ms 0.02% 21.24% 3122ms 20.82% H5D__write 121ms 0.81% 22.05% 2746ms 18.32% AbstractCardiacTissue::UpdateCaches (inline) 808ms 5.39% 27.44% 2583ms 17.23% CellLuoRudy1991FromCellML::GetIIonic 1671ms 11.15% 38.58% 1829ms 12.20% __ieee754_exp_fma 1ms 0.0067% 38.59% 1719ms 11.47% H5D__chunk_collective_write 13ms 0.087% 38.68% 1718ms 11.46% H5F_set_coll_metadata_reads 25ms 0.17% 38.84% 1518ms 10.12% H5FD_s3comms_uriencode 1ms 0.0067% 38.85% 1453ms 9.69% LinearSystem::Solve 0 0% 38.85% 1344ms 8.96% KSPSolve 3ms 0.02% 38.87% 1344ms 8.96% KSPSolve_Private 4ms 0.027% 38.90% 1331ms 8.88% KSPSolve_CG 11ms 0.073% 38.97% 1271ms 8.48% H5D__chunk_cacheable 49ms 0.33% 39.30% 1136ms 7.58% 0 0% 39.30% 1131ms 7.54% H5F_block_write 2ms 0.013% 39.31% 1131ms 7.54% H5PB_write 1ms 0.0067% 39.32% 1129ms 7.53% H5F__accum_write 1ms 0.0067% 39.33% 1128ms 7.52% H5FD_write 450ms 3.00% 42.33% 1097ms 7.32% H5S_select_iterate 2ms 0.013% 42.34% 1029ms 6.86% H5D__mpio_select_write 14ms 0.093% 42.43% 940ms 6.27% std::pow (inline) 0 0% 42.43% 926ms 6.18% PMPI_File_write_at_all 88ms 0.59% 43.02% 926ms 6.18% __pow 898ms 5.99% 49.01% 900ms 6.00% __GI_pwritev64 114ms 0.76% 49.77% 836ms 5.58% __ieee754_pow_fma 335ms 2.23% 52.00% 765ms 5.10% MonodomainSolver::SetupLinearSystem 2ms 0.013% 52.02% 718ms 4.79% PCApply 0 0% 52.02% 712ms 4.75% PCApply_BJacobi_Singleblock 0 0% 52.02% 677ms 4.52% KSPSolve_PREONLY 1ms 0.0067% 52.02% 669ms 4.46% PCApply_ICC 2ms 0.013% 52.04% 668ms 4.46% MatSolve 658ms 4.39% 56.43% 666ms 4.44% MatSolve_SeqSBAIJ_1_NaturalOrdering 63ms 0.42% 56.85% 664ms 4.43% H5D__chunk_set_sizes 289ms 1.93% 58.77% 656ms 4.38% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 58.79% 595ms 3.97% MatMult 588ms 3.92% 62.72% 592ms 3.95% MatMult_SeqAIJ 0 0% 62.72% 495ms 3.30% KSP_PCApply.lto_priv.7 59ms 0.39% 63.11% 487ms 3.25% H5S_mpio_space_type 377ms 2.51% 65.62% 377ms 2.51% log_inline (inline) 316ms 2.11% 67.73% 316ms 2.11% exp_inline (inline) 1ms 0.0067% 67.74% 303ms 2.02% KSPConvergedDefault 126ms 0.84% 68.58% 239ms 1.59% TimeStepper::TimeStepper 1ms 0.0067% 68.59% 229ms 1.53% KSP_PCApply 17ms 0.11% 68.70% 208ms 1.39% H5VM_chunk_index 116ms 0.77% 69.47% 201ms 1.34% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 39ms 0.26% 69.73% 200ms 1.33% __GI___libc_malloc 158ms 1.05% 70.79% 186ms 1.24% _int_malloc 120ms 0.8% 71.59% 185ms 1.23% top12 (inline) 180ms 1.20% 72.79% 180ms 1.20% std::isinf (inline) 2ms 0.013% 72.80% 178ms 1.19% Hdf5DataWriter::PutUnlimitedVariable 33ms 0.22% 73.02% 170ms 1.13% AbstractCardiacCell::SetVoltage (partial-inline) 165ms 1.10% 74.12% 165ms 1.10% [libchaste_heart.so] 7ms 0.047% 74.17% 161ms 1.07% ompi_datatype_create 13ms 0.087% 74.25% 159ms 1.06% ompi_datatype_destroy 124ms 0.83% 75.08% 157ms 1.05% AbstractOneStepIvpOdeSolver::Solve 5ms 0.033% 75.12% 155ms 1.03% MPI_Type_free 154ms 1.03% 76.14% 154ms 1.03% ddot_ 133ms 0.89% 77.03% 149ms 0.99% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 23ms 0.15% 77.18% 144ms 0.96% H5S_set_version 27ms 0.18% 77.36% 143ms 0.95% __GI___libc_free 7ms 0.047% 77.41% 135ms 0.9% ompi_info_register_framework_params 37ms 0.25% 77.66% 134ms 0.89% ompi_datatype_release_args 75ms 0.5% 78.16% 129ms 0.86% H5S_hyper_add_span_element 48ms 0.32% 78.48% 121ms 0.81% H5VM_array_calc 2ms 0.013% 78.49% 120ms 0.8% PMPI_File_set_view 119ms 0.79% 79.28% 119ms 0.79% TimeStepper::CalculateNextTime 119ms 0.79% 80.08% 119ms 0.79% __ieee754_log_fma 45ms 0.3% 80.38% 115ms 0.77% _int_free 105ms 0.7% 81.08% 111ms 0.74% AbstractParameterisedSystem::SetAnyVariable 107ms 0.71% 81.79% 107ms 0.71% __memcpy_avx_unaligned_erms 104ms 0.69% 82.49% 104ms 0.69% H5VM_chunk_index_scaled 55ms 0.37% 82.85% 104ms 0.69% std::__cxx11::basic_string::basic_string 3ms 0.02% 82.87% 101ms 0.67% VecNorm 3ms 0.02% 82.89% 100ms 0.67% PMPI_Type_create_resized 2ms 0.013% 82.91% 95ms 0.63% ompi_datatype_duplicate 0 0% 82.91% 92ms 0.61% VecTDot 2ms 0.013% 82.92% 92ms 0.61% VecTDot_Seq 2ms 0.013% 82.93% 91ms 0.61% VecNorm_Seq 72ms 0.48% 83.41% 90ms 0.6% AbstractParameterisedSystem::GetAnyVariable 0 0% 83.41% 90ms 0.6% VecXDot_Seq_Private.constprop.0 88ms 0.59% 84.00% 88ms 0.59% H5VM_array_offset_pre 2ms 0.013% 84.01% 83ms 0.55% H5D__chunk_allocated 34ms 0.23% 84.24% 83ms 0.55% ompi_datatype_set_args 44ms 0.29% 84.53% 81ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 3ms 0.02% 84.55% 81ms 0.54% VecDuplicate 1ms 0.0067% 84.56% 80ms 0.53% MPI_Type_create_hindexed 2ms 0.013% 84.57% 78ms 0.52% VecDuplicate_MPI 0 0% 84.57% 77ms 0.51% H5D__select_write 2ms 0.013% 84.59% 77ms 0.51% H5Dgather 77ms 0.51% 85.10% 77ms 0.51% [libm.so.6] 31ms 0.21% 85.31% 76ms 0.51% H5S__hyper_rebuild 0 0% 85.31% 75ms 0.5% H5D__contig_fill 0 0% 85.31% 75ms 0.5% H5D__contig_write 0 0% 85.31% 75ms 0.5% H5VM_opvv