File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 2821ms, 89.27% of 3160ms total Dropped 382 nodes (cum <= 15.80ms) flat flat% sum% cum cum% 0 0% 0% 3153ms 99.78% __libc_start_call_main 0 0% 0% 3153ms 99.78% __libc_start_main_impl 0 0% 0% 3153ms 99.78% _start 0 0% 0% 3151ms 99.72% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 3151ms 99.72% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 3151ms 99.72% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 3151ms 99.72% main 0 0% 0% 3119ms 98.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 3119ms 98.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 3119ms 98.70% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 3113ms 98.51% AbstractCardiacProblem::Solve 0 0% 0% 3107ms 98.32% AbstractDynamicLinearPdeSolver::Solve 6ms 0.19% 0.19% 1481ms 46.87% AbstractCardiacTissue::SolveCellSystems 0 0% 0.19% 1292ms 40.89% LinearSystem::Solve 0 0% 0.19% 1262ms 39.94% KSPSolve 1ms 0.032% 0.22% 1262ms 39.94% KSPSolve_Private 0 0% 0.22% 1241ms 39.27% KSPSolve_SYMMLQ 3ms 0.095% 0.32% 864ms 27.34% AbstractCardiacCell::ComputeExceptVoltage 9ms 0.28% 0.6% 773ms 24.46% AbstractOneStepIvpOdeSolver::InternalSolve 2ms 0.063% 0.66% 699ms 22.12% MatMult 7ms 0.22% 0.89% 689ms 21.80% MatMult_SeqAIJ (partial-inline) 679ms 21.49% 22.37% 688ms 21.77% MatMult_SeqAIJ_Inode (inline) 66ms 2.09% 24.46% 675ms 21.36% EulerIvpOdeSolver::CalculateNextYValue 3ms 0.095% 24.56% 648ms 20.51% PCApply 0 0% 24.56% 642ms 20.32% PCApply_BJacobi_Singleblock 222ms 7.03% 31.58% 602ms 19.05% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 31.58% 549ms 17.37% KSPSolve_PREONLY (partial-inline) 8ms 0.25% 31.84% 525ms 16.61% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.095% 31.93% 516ms 16.33% MatSolve 0 0% 31.93% 516ms 16.33% PCApply_ICC 504ms 15.95% 47.88% 507ms 16.04% MatSolve_SeqSBAIJ_1_NaturalOrdering 205ms 6.49% 54.37% 501ms 15.85% CellLuoRudy1991FromCellML::GetIIonic 0 0% 54.37% 470ms 14.87% KSP_PCApply.lto_priv.18 163ms 5.16% 59.53% 449ms 14.21% __GI___exp 16ms 0.51% 60.03% 309ms 9.78% BidomainSolver::SetupLinearSystem 233ms 7.37% 67.41% 235ms 7.44% __ieee754_exp_fma 0 0% 67.41% 229ms 7.25% KSPConvergedDefault 0 0% 67.41% 218ms 6.90% KSP_PCApply (partial-inline) 2ms 0.063% 67.47% 158ms 5.00% std::pow (inline) 13ms 0.41% 67.88% 155ms 4.91% __pow 11ms 0.35% 68.23% 139ms 4.40% __ieee754_pow_fma 94ms 2.97% 71.20% 94ms 2.97% [libchaste_heart.so] 4ms 0.13% 71.33% 84ms 2.66% MatNullSpaceRemove 47ms 1.49% 72.82% 72ms 2.28% CellLuoRudy1991FromCellML::VerifyStateVariables 70ms 2.22% 75.03% 70ms 2.22% log_inline (inline) 26ms 0.82% 75.85% 69ms 2.18% MPI_Wtime 53ms 1.68% 77.53% 57ms 1.80% exp_inline (inline) 56ms 1.77% 79.30% 56ms 1.77% [libm.so.6] 0 0% 79.30% 55ms 1.74% VecDuplicate 0 0% 79.30% 52ms 1.65% VecMDot 1ms 0.032% 79.34% 52ms 1.65% VecMXDot_Private 7ms 0.22% 79.56% 47ms 1.49% PetscLogEventEndDefault 5ms 0.16% 79.72% 45ms 1.42% PetscLogEventBeginDefault 2ms 0.063% 79.78% 40ms 1.27% __GI___clock_gettime 39ms 1.23% 81.01% 39ms 1.23% ddot_ 38ms 1.20% 82.22% 38ms 1.20% TimeStepper::CalculateNextTime 38ms 1.20% 83.42% 38ms 1.20% [[vdso]] 35ms 1.11% 84.53% 35ms 1.11% VecMDot_Seq 7ms 0.22% 84.75% 32ms 1.01% TimeStepper::TimeStepper 9ms 0.28% 85.03% 31ms 0.98% TimeStepper::AdvanceOneTimeStep 1ms 0.032% 85.06% 31ms 0.98% VecDuplicate_MPI 4ms 0.13% 85.19% 30ms 0.95% VecCopy 29ms 0.92% 86.11% 29ms 0.92% [libchaste_ode.so] 0 0% 86.11% 28ms 0.89% CxxTest::RealWorldDescription::setUp 0 0% 86.11% 28ms 0.89% PetscInitialize 0 0% 86.11% 28ms 0.89% PetscSetup::setUpWorld 0 0% 86.11% 28ms 0.89% PetscSetupUtils::CommonSetup 0 0% 86.11% 28ms 0.89% PetscSetupUtils::InitialisePetsc 2ms 0.063% 86.17% 28ms 0.89% VecMAXPY 0 0% 86.17% 28ms 0.89% VecNorm 0 0% 86.17% 27ms 0.85% PMPI_Init_thread 0 0% 86.17% 27ms 0.85% VecDot 0 0% 86.17% 27ms 0.85% ompi_mpi_init 1ms 0.032% 86.20% 24ms 0.76% 13ms 0.41% 86.61% 24ms 0.76% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.032% 86.65% 24ms 0.76% VecDestroy 1ms 0.032% 86.68% 24ms 0.76% VecDuplicate_Seq 4ms 0.13% 86.80% 23ms 0.73% VecAXPY 0 0% 86.80% 23ms 0.73% VecDot_Seq 0 0% 86.80% 23ms 0.73% VecXDot_Seq_Private.constprop.0 6ms 0.19% 86.99% 22ms 0.7% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 86.99% 22ms 0.7% AbstractBidomainSolver::FinaliseLinearSystem 17ms 0.54% 87.53% 22ms 0.7% AbstractOneStepIvpOdeSolver::Solve 0 0% 87.53% 22ms 0.7% VecNorm_Seq 5ms 0.16% 87.69% 21ms 0.66% PetscMallocA 1ms 0.032% 87.72% 21ms 0.66% VecCreate_MPI_Private 7ms 0.22% 87.94% 20ms 0.63% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 1ms 0.032% 87.97% 20ms 0.63% VecCreate 0 0% 87.97% 20ms 0.63% VecNorm_MPI 0 0% 87.97% 20ms 0.63% VecNorm_MPI_Default.constprop.0 0 0% 87.97% 20ms 0.63% orte_init 5ms 0.16% 88.13% 18ms 0.57% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.032% 88.16% 18ms 0.57% PMPI_Comm_get_attr 0 0% 88.16% 18ms 0.57% VecStashCreate_Private 14ms 0.44% 88.61% 17ms 0.54% AbstractParameterisedSystem::GetAnyVariable 2ms 0.063% 88.67% 17ms 0.54% ompi_attr_get_c 3ms 0.095% 88.77% 16ms 0.51% PetscMallocAlign 16ms 0.51% 89.27% 16ms 0.51% __memcpy_avx512_unaligned_erms