File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 393ms, 88.12% of 446ms total Dropped 175 nodes (cum <= 2.23ms) flat flat% sum% cum cum% 0 0% 0% 439ms 98.43% __libc_start_call_main 0 0% 0% 439ms 98.43% __libc_start_main_impl 0 0% 0% 439ms 98.43% _start 0 0% 0% 436ms 97.76% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 436ms 97.76% CxxTest::TestRunner::runAllTests 0 0% 0% 436ms 97.76% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 436ms 97.76% main 0 0% 0% 394ms 88.34% CxxTest::RealTestDescription::run 0 0% 0% 394ms 88.34% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 394ms 88.34% CxxTest::TestRunner::runTest (inline) 0 0% 0% 394ms 88.34% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 394ms 88.34% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 390ms 87.44% AbstractCardiacProblem::Solve 0 0% 0% 390ms 87.44% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 353ms 79.15% KSPSolve 0 0% 0% 353ms 79.15% KSPSolve_Private 0 0% 0% 353ms 79.15% LinearSystem::Solve 1ms 0.22% 0.22% 351ms 78.70% KSPSolve_CG 0 0% 0.22% 201ms 45.07% KSP_PCApply.lto_priv.7 0 0% 0.22% 199ms 44.62% PCApply 0 0% 0.22% 199ms 44.62% PCApply_BJacobi_Singleblock 0 0% 0.22% 161ms 36.10% KSPSolve_PREONLY (partial-inline) 0 0% 0.22% 151ms 33.86% MatSolve 150ms 33.63% 33.86% 151ms 33.86% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 33.86% 151ms 33.86% PCApply_ICC 0 0% 33.86% 79ms 17.71% MatMult 1ms 0.22% 34.08% 79ms 17.71% MatMult_SeqAIJ (partial-inline) 78ms 17.49% 51.57% 79ms 17.71% MatMult_SeqAIJ_Inode (inline) 51ms 11.43% 63.00% 51ms 11.43% ddot_ 0 0% 63.00% 38ms 8.52% CxxTest::RealWorldDescription::setUp 0 0% 63.00% 38ms 8.52% PetscInitialize 0 0% 63.00% 38ms 8.52% PetscSetup::setUpWorld 0 0% 63.00% 38ms 8.52% PetscSetupUtils::CommonSetup 0 0% 63.00% 38ms 8.52% PetscSetupUtils::InitialisePetsc 0 0% 63.00% 37ms 8.30% PMPI_Init_thread 0 0% 63.00% 37ms 8.30% ompi_mpi_init 0 0% 63.00% 35ms 7.85% VecTDot 0 0% 63.00% 35ms 7.85% VecTDot_Seq 0 0% 63.00% 35ms 7.85% VecXDot_Seq_Private.constprop.0 2ms 0.45% 63.45% 31ms 6.95% 0 0% 63.45% 31ms 6.95% AbstractCardiacTissue::SolveCellSystems 0 0% 63.45% 27ms 6.05% orte_init 0 0% 63.45% 25ms 5.61% MatNullSpaceRemove 0 0% 63.45% 22ms 4.93% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.22% 63.68% 20ms 4.48% AbstractOneStepIvpOdeSolver::InternalSolve 6ms 1.35% 65.02% 17ms 3.81% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 65.02% 17ms 3.81% EulerIvpOdeSolver::CalculateNextYValue 0 0% 65.02% 16ms 3.59% KSP_PCApply (partial-inline) 0 0% 65.02% 16ms 3.59% VecNorm 0 0% 65.02% 16ms 3.59% VecNorm_Seq 0 0% 65.02% 16ms 3.59% hwloc_topology_load 0 0% 65.02% 14ms 3.14% VecDuplicate 1ms 0.22% 65.25% 14ms 3.14% VecDuplicate_Seq 0 0% 65.25% 13ms 2.91% VecMDot 13ms 2.91% 68.16% 13ms 2.91% VecMDot_Seq 0 0% 68.16% 13ms 2.91% VecMXDot_Private 0 0% 68.16% 13ms 2.91% __GI__dl_catch_exception 0 0% 68.16% 13ms 2.91% _dl_catch_error 0 0% 68.16% 13ms 2.91% _dlerror_run 0 0% 68.16% 13ms 2.91% hwloc_linux_get_tid_last_cpu_location 3ms 0.67% 68.83% 12ms 2.69% PetscMallocA 0 0% 68.83% 12ms 2.69% VecMAXPY 11ms 2.47% 71.30% 12ms 2.69% VecMAXPY_Seq 4ms 0.9% 72.20% 12ms 2.69% __GI___exp 0 0% 72.20% 12ms 2.69% mca_base_framework_open 0 0% 72.20% 12ms 2.69% opal_stackframe_output 0 0% 72.20% 11ms 2.47% mca_base_framework_components_register 0 0% 72.20% 11ms 2.47% mca_base_framework_register 0 0% 72.20% 10ms 2.24% ___dlopen 0 0% 72.20% 10ms 2.24% _dl_open 0 0% 72.20% 10ms 2.24% dl_open_worker 0 0% 72.20% 10ms 2.24% dl_open_worker_begin 0 0% 72.20% 10ms 2.24% dlopen_doit 0 0% 72.20% 10ms 2.24% dlopen_implementation (inline) 0 0% 72.20% 9ms 2.02% PetscMallocAlign (partial-inline) 9ms 2.02% 74.22% 9ms 2.02% __memcpy_avx_unaligned_erms 0 0% 74.22% 9ms 2.02% mca_base_component_find 0 0% 74.22% 9ms 2.02% mca_base_component_repository_open 0 0% 74.22% 8ms 1.79% PetscMemcpy (inline) 0 0% 74.22% 8ms 1.79% PetscMemzero (inline) 1ms 0.22% 74.44% 8ms 1.79% VecSetType 8ms 1.79% 76.23% 8ms 1.79% __ieee754_exp_fma 8ms 1.79% 78.03% 8ms 1.79% __memset_avx2_unaligned_erms 1ms 0.22% 78.25% 7ms 1.57% VecAXPY 0 0% 78.25% 7ms 1.57% VecCopy 0 0% 78.25% 7ms 1.57% VecCopy_Seq (partial-inline) 0 0% 78.25% 7ms 1.57% VecCreate_Seq 0 0% 78.25% 7ms 1.57% _dl_init 0 0% 78.25% 7ms 1.57% _dl_start_user 0 0% 78.25% 7ms 1.57% call_init (inline) 0 0% 78.25% 7ms 1.57% opal_hwloc_base_get_topology 0 0% 78.25% 7ms 1.57% orte_ess_base_proc_binding 0 0% 78.25% 6ms 1.35% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.22% 78.48% 6ms 1.35% CellLuoRudy1991FromCellML::GetIIonic 0 0% 78.48% 6ms 1.35% KSPConvergedDefault 0 0% 78.48% 6ms 1.35% VecAXPY_Seq 0 0% 78.48% 6ms 1.35% VecAYPX 6ms 1.35% 79.82% 6ms 1.35% VecAYPX_Seq 0 0% 79.82% 6ms 1.35% _dl_lookup_symbol_x 0 0% 79.82% 6ms 1.35% _dl_open_relocate_one_object (inline) 0 0% 79.82% 6ms 1.35% _dl_relocate_object 6ms 1.35% 81.17% 6ms 1.35% daxpy_ 6ms 1.35% 82.51% 6ms 1.35% do_lookup_x 2ms 0.45% 82.96% 5ms 1.12% BidomainSolver::SetupLinearSystem 0 0% 82.96% 5ms 1.12% VecCreate 0 0% 82.96% 5ms 1.12% VecDestroy 1ms 0.22% 83.18% 5ms 1.12% __GI___libc_malloc 2ms 0.45% 83.63% 5ms 1.12% __cxa_finalize 0 0% 83.63% 5ms 1.12% _dl_call_fini 1ms 0.22% 83.86% 5ms 1.12% boost::serialization::singleton::get_instance 0 0% 83.86% 5ms 1.12% elf_dynamic_do_Rela (inline) 0 0% 83.86% 5ms 1.12% elf_machine_rela (inline) 0 0% 83.86% 5ms 1.12% resolve_map (inline) 0 0% 83.86% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 83.86% 4ms 0.9% PetscFinalize 0 0% 83.86% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 83.86% 4ms 0.9% PetscSetupUtils::CommonFinalize 2ms 0.45% 84.30% 4ms 0.9% VecSet 4ms 0.9% 85.20% 4ms 0.9% __GI___fstatat64 4ms 0.9% 86.10% 4ms 0.9% __GI___libc_read 0 0% 86.10% 4ms 0.9% _dl_map_object 1ms 0.22% 86.32% 4ms 0.9% _dl_runtime_resolve_xsavec 0 0% 86.32% 4ms 0.9% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 86.32% 4ms 0.9% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.32% 4ms 0.9% ompi_mpi_finalize 0 0% 86.32% 3ms 0.67% AbstractCardiacProblem::Initialise 0 0% 86.32% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 86.32% 3ms 0.67% PetscFunctionListAdd_Private 0 0% 86.32% 3ms 0.67% PetscFunctionListCreate_Private 0 0% 86.32% 3ms 0.67% PetscObjectComposeFunction_Petsc 0 0% 86.32% 3ms 0.67% PetscObjectComposeFunction_Private 0 0% 86.32% 3ms 0.67% VecDestroy_Seq 0 0% 86.32% 3ms 0.67% __GI_exit 0 0% 86.32% 3ms 0.67% __dlclose 3ms 0.67% 87.00% 3ms 0.67% __libc_openat64 0 0% 87.00% 3ms 0.67% __posix_memalign 0 0% 87.00% 3ms 0.67% __run_exit_handlers 0 0% 87.00% 3ms 0.67% _dl_close 0 0% 87.00% 3ms 0.67% _dl_close_worker (inline) 0 0% 87.00% 3ms 0.67% _dl_fini 2ms 0.45% 87.44% 3ms 0.67% _dl_fixup 0 0% 87.44% 3ms 0.67% _dl_map_object_from_fd 2ms 0.45% 87.89% 3ms 0.67% _int_malloc 1ms 0.22% 88.12% 3ms 0.67% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.12% 3ms 0.67% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.12% 3ms 0.67% mca_base_component_repository_release 0 0% 88.12% 3ms 0.67% orte_finalize