File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12883ms, 86.39% of 14912ms total Dropped 752 nodes (cum <= 74.56ms) flat flat% sum% cum cum% 0 0% 0% 14901ms 99.93% __libc_start_call_main 0 0% 0% 14901ms 99.93% __libc_start_main_impl 0 0% 0% 14901ms 99.93% _start 0 0% 0% 14899ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14899ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14899ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14899ms 99.91% main 0 0% 0% 14860ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14860ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14860ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 4ms 0.027% 0.027% 14837ms 99.50% AbstractCardiacProblem::Solve 5ms 0.034% 0.06% 11420ms 76.58% AbstractDynamicLinearPdeSolver::Solve 35ms 0.23% 0.3% 9159ms 61.42% AbstractCardiacTissue::SolveCellSystems 135ms 0.91% 1.20% 5722ms 38.37% AbstractCardiacCell::ComputeExceptVoltage 159ms 1.07% 2.27% 4941ms 33.13% AbstractOneStepIvpOdeSolver::InternalSolve 168ms 1.13% 3.39% 4170ms 27.96% EulerIvpOdeSolver::CalculateNextYValue 959ms 6.43% 9.82% 3949ms 26.48% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1772ms 11.88% 21.71% 3577ms 23.99% __GI___exp 3ms 0.02% 21.73% 3350ms 22.47% MonodomainProblem::WriteOneStep 2ms 0.013% 21.74% 3201ms 21.47% Hdf5DataWriter::PutVector 3ms 0.02% 21.76% 3139ms 21.05% H5Dwrite 1ms 0.0067% 21.77% 3097ms 20.77% H5D__write 86ms 0.58% 22.34% 2593ms 17.39% AbstractCardiacTissue::UpdateCaches (inline) 783ms 5.25% 27.60% 2464ms 16.52% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.60% 1817ms 12.18% H5D__chunk_collective_write 20ms 0.13% 27.74% 1816ms 12.18% H5F_set_coll_metadata_reads 1596ms 10.70% 38.44% 1726ms 11.57% __ieee754_exp_fma 19ms 0.13% 38.57% 1544ms 10.35% H5FD_s3comms_uriencode 2ms 0.013% 38.58% 1537ms 10.31% LinearSystem::Solve 2ms 0.013% 38.59% 1403ms 9.41% KSPSolve 1ms 0.0067% 38.60% 1402ms 9.40% KSPSolve_Private 6ms 0.04% 38.64% 1391ms 9.33% KSPSolve_CG 8ms 0.054% 38.69% 1190ms 7.98% H5D__chunk_cacheable 5ms 0.034% 38.73% 1177ms 7.89% H5F_block_write 3ms 0.02% 38.75% 1172ms 7.86% H5PB_write 1ms 0.0067% 38.75% 1169ms 7.84% H5F__accum_write 1ms 0.0067% 38.76% 1168ms 7.83% H5FD_write 53ms 0.36% 39.12% 1167ms 7.83% 3ms 0.02% 39.14% 1105ms 7.41% H5D__mpio_select_write 406ms 2.72% 41.86% 1034ms 6.93% H5S_select_iterate 3ms 0.02% 41.88% 1006ms 6.75% PMPI_File_write_at_all 972ms 6.52% 48.40% 973ms 6.52% __GI_pwritev64 9ms 0.06% 48.46% 877ms 5.88% std::pow (inline) 87ms 0.58% 49.04% 868ms 5.82% __pow 2ms 0.013% 49.05% 782ms 5.24% PCApply 98ms 0.66% 49.71% 780ms 5.23% __ieee754_pow_fma 0 0% 49.71% 779ms 5.22% PCApply_BJacobi_Singleblock 0 0% 49.71% 730ms 4.90% KSPSolve_PREONLY 1ms 0.0067% 49.72% 725ms 4.86% PCApply_ICC 2ms 0.013% 49.73% 724ms 4.86% MatSolve 714ms 4.79% 54.52% 722ms 4.84% MatSolve_SeqSBAIJ_1_NaturalOrdering 311ms 2.09% 56.61% 696ms 4.67% MonodomainSolver::SetupLinearSystem 299ms 2.01% 58.61% 646ms 4.33% CellLuoRudy1991FromCellML::VerifyStateVariables 75ms 0.5% 59.11% 643ms 4.31% H5D__chunk_set_sizes 2ms 0.013% 59.13% 574ms 3.85% MatMult 570ms 3.82% 62.95% 572ms 3.84% MatMult_SeqAIJ 0 0% 62.95% 571ms 3.83% KSP_PCApply.lto_priv.7 59ms 0.4% 63.34% 468ms 3.14% H5S_mpio_space_type 355ms 2.38% 65.73% 355ms 2.38% log_inline (inline) 293ms 1.96% 67.69% 297ms 1.99% exp_inline (inline) 151ms 1.01% 68.70% 266ms 1.78% TimeStepper::TimeStepper 1ms 0.0067% 68.71% 260ms 1.74% KSPConvergedDefault 0 0% 68.71% 212ms 1.42% KSP_PCApply 17ms 0.11% 68.82% 201ms 1.35% H5VM_chunk_index 55ms 0.37% 69.19% 188ms 1.26% __GI___libc_malloc 6ms 0.04% 69.23% 178ms 1.19% MPI_Type_free 8ms 0.054% 69.29% 178ms 1.19% ompi_datatype_destroy 174ms 1.17% 70.45% 174ms 1.17% [libchaste_heart.so] 137ms 0.92% 71.37% 172ms 1.15% AbstractOneStepIvpOdeSolver::Solve 98ms 0.66% 72.03% 168ms 1.13% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 33ms 0.22% 72.25% 165ms 1.11% AbstractCardiacCell::SetVoltage (partial-inline) 140ms 0.94% 73.19% 165ms 1.11% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 31ms 0.21% 73.40% 165ms 1.11% __GI___libc_free 88ms 0.59% 73.99% 163ms 1.09% top12 (inline) 130ms 0.87% 74.86% 161ms 1.08% _int_malloc 161ms 1.08% 75.94% 161ms 1.08% std::isinf (inline) 50ms 0.34% 76.27% 159ms 1.07% ompi_datatype_release_args 8ms 0.054% 76.33% 159ms 1.07% ompi_info_register_framework_params 147ms 0.99% 77.31% 147ms 0.99% ddot_ 2ms 0.013% 77.33% 146ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 141ms 0.95% 78.27% 141ms 0.95% __memcpy_avx_unaligned_erms 9ms 0.06% 78.33% 140ms 0.94% ompi_datatype_create 45ms 0.3% 78.63% 133ms 0.89% _int_free 68ms 0.46% 79.09% 128ms 0.86% H5S_hyper_add_span_element 20ms 0.13% 79.22% 118ms 0.79% H5S_set_version 58ms 0.39% 79.61% 115ms 0.77% std::__cxx11::basic_string::basic_string 113ms 0.76% 80.37% 113ms 0.76% TimeStepper::CalculateNextTime 2ms 0.013% 80.38% 110ms 0.74% VecNorm 109ms 0.73% 81.12% 109ms 0.73% __ieee754_log_fma 95ms 0.64% 81.75% 104ms 0.7% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0067% 81.76% 104ms 0.7% PMPI_File_set_view 1ms 0.0067% 81.77% 103ms 0.69% VecNorm_Seq 39ms 0.26% 82.03% 98ms 0.66% H5VM_array_calc 1ms 0.0067% 82.03% 98ms 0.66% PMPI_Type_create_resized 96ms 0.64% 82.68% 96ms 0.64% H5VM_array_offset_pre 0 0% 82.68% 96ms 0.64% VecDuplicate 1ms 0.0067% 82.69% 96ms 0.64% VecDuplicate_MPI 89ms 0.6% 83.28% 89ms 0.6% H5VM_chunk_index_scaled 67ms 0.45% 83.73% 88ms 0.59% AbstractParameterisedSystem::GetAnyVariable 48ms 0.32% 84.05% 88ms 0.59% H5SL_search 1ms 0.0067% 84.06% 88ms 0.59% ompi_datatype_duplicate 5ms 0.034% 84.09% 87ms 0.58% std::vector::_M_assign_aux (inline) 0 0% 84.09% 87ms 0.58% std::vector::assign (inline) 29ms 0.19% 84.29% 84ms 0.56% ompi_datatype_set_args 4ms 0.027% 84.31% 83ms 0.56% VecTDot 1ms 0.0067% 84.32% 81ms 0.54% H5Pcreate 80ms 0.54% 84.86% 80ms 0.54% [libm.so.6] 35ms 0.23% 85.09% 78ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline) 4ms 0.027% 85.12% 78ms 0.52% H5P_create_id 0 0% 85.12% 78ms 0.52% VecTDot_Seq 0 0% 85.12% 78ms 0.52% VecXDot_Seq_Private.constprop.0 77ms 0.52% 85.64% 77ms 0.52% std::vector::operator[] (inline) 37ms 0.25% 85.88% 76ms 0.51% H5S_select_iter_next 76ms 0.51% 86.39% 76ms 0.51% asuint64 (inline)