File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 379ms, 86.73% of 437ms total Dropped 183 nodes (cum <= 2.19ms) flat flat% sum% cum cum% 0 0% 0% 431ms 98.63% __libc_start_call_main 0 0% 0% 431ms 98.63% __libc_start_main_impl 0 0% 0% 431ms 98.63% _start 0 0% 0% 428ms 97.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 428ms 97.94% CxxTest::TestRunner::runAllTests 0 0% 0% 428ms 97.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 428ms 97.94% main 0 0% 0% 396ms 90.62% CxxTest::RealTestDescription::run 0 0% 0% 396ms 90.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 396ms 90.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 396ms 90.62% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 396ms 90.62% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 392ms 89.70% AbstractCardiacProblem::Solve 0 0% 0% 391ms 89.47% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 353ms 80.78% KSPSolve 1ms 0.23% 0.23% 353ms 80.78% KSPSolve_Private 0 0% 0.23% 353ms 80.78% LinearSystem::Solve 0 0% 0.23% 352ms 80.55% KSPSolve_CG 0 0% 0.23% 216ms 49.43% KSP_PCApply.lto_priv.7 1ms 0.23% 0.46% 212ms 48.51% PCApply 0 0% 0.46% 211ms 48.28% PCApply_BJacobi_Singleblock 0 0% 0.46% 174ms 39.82% KSPSolve_PREONLY (partial-inline) 0 0% 0.46% 160ms 36.61% MatSolve 157ms 35.93% 36.38% 160ms 36.61% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.38% 160ms 36.61% PCApply_ICC 60ms 13.73% 50.11% 60ms 13.73% ddot_ 0 0% 50.11% 54ms 12.36% MatMult 1ms 0.23% 50.34% 54ms 12.36% MatMult_SeqAIJ (partial-inline) 53ms 12.13% 62.47% 54ms 12.36% MatMult_SeqAIJ_Inode (inline) 0 0% 62.47% 38ms 8.70% VecTDot 0 0% 62.47% 38ms 8.70% VecTDot_Seq 0 0% 62.47% 38ms 8.70% VecXDot_Seq_Private.constprop.0 1ms 0.23% 62.70% 33ms 7.55% AbstractCardiacTissue::SolveCellSystems 0 0% 62.70% 31ms 7.09% MatNullSpaceRemove 0 0% 62.70% 29ms 6.64% CxxTest::RealWorldDescription::setUp 0 0% 62.70% 29ms 6.64% PMPI_Init_thread 0 0% 62.70% 29ms 6.64% PetscInitialize 0 0% 62.70% 29ms 6.64% PetscSetup::setUpWorld 0 0% 62.70% 29ms 6.64% PetscSetupUtils::CommonSetup 0 0% 62.70% 29ms 6.64% PetscSetupUtils::InitialisePetsc 0 0% 62.70% 29ms 6.64% ompi_mpi_init 0 0% 62.70% 24ms 5.49% 0 0% 62.70% 22ms 5.03% VecNorm 0 0% 62.70% 22ms 5.03% VecNorm_Seq 0 0% 62.70% 21ms 4.81% VecMDot 1ms 0.23% 62.93% 21ms 4.81% VecMXDot_Private 0 0% 62.93% 20ms 4.58% AbstractCardiacCell::ComputeExceptVoltage 20ms 4.58% 67.51% 20ms 4.58% VecMDot_Seq 0 0% 67.51% 19ms 4.35% orte_init 2ms 0.46% 67.96% 17ms 3.89% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 67.96% 17ms 3.89% KSP_PCApply (partial-inline) 0 0% 67.96% 14ms 3.20% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 67.96% 14ms 3.20% EulerIvpOdeSolver::CalculateNextYValue 7ms 1.60% 69.57% 13ms 2.97% __GI___exp 0 0% 69.57% 12ms 2.75% VecDuplicate 2ms 0.46% 70.02% 12ms 2.75% VecDuplicate_Seq 0 0% 70.02% 12ms 2.75% hwloc_topology_load 0 0% 70.02% 11ms 2.52% VecAYPX 11ms 2.52% 72.54% 11ms 2.52% VecAYPX_Seq 0 0% 72.54% 11ms 2.52% __GI__dl_catch_exception 0 0% 72.54% 11ms 2.52% _dl_catch_error 0 0% 72.54% 11ms 2.52% _dlerror_run 0 0% 72.54% 11ms 2.52% hwloc_linux_get_tid_last_cpu_location 0 0% 72.54% 10ms 2.29% VecMAXPY 10ms 2.29% 74.83% 10ms 2.29% VecMAXPY_Seq 0 0% 74.83% 10ms 2.29% mca_base_framework_open 0 0% 74.83% 10ms 2.29% opal_stackframe_output 0 0% 74.83% 9ms 2.06% VecSetType 0 0% 74.83% 9ms 2.06% mca_base_framework_components_register 0 0% 74.83% 9ms 2.06% mca_base_framework_register 0 0% 74.83% 8ms 1.83% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.23% 75.06% 8ms 1.83% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.06% 8ms 1.83% ___dlopen 0 0% 75.06% 8ms 1.83% _dl_open 0 0% 75.06% 8ms 1.83% dl_open_worker 0 0% 75.06% 8ms 1.83% dl_open_worker_begin 0 0% 75.06% 8ms 1.83% dlopen_doit 0 0% 75.06% 8ms 1.83% dlopen_implementation (inline) 0 0% 75.06% 7ms 1.60% PetscMallocA 1ms 0.23% 75.29% 7ms 1.60% PetscMallocAlign 0 0% 75.29% 7ms 1.60% VecCreate_Seq 2ms 0.46% 75.74% 7ms 1.60% VecDestroy 0 0% 75.74% 7ms 1.60% mca_base_component_find 0 0% 75.74% 7ms 1.60% mca_base_component_repository_open 0 0% 75.74% 6ms 1.37% KSPConvergedDefault 0 0% 75.74% 6ms 1.37% PetscMemcpy (inline) 0 0% 75.74% 6ms 1.37% __GI___libc_malloc 6ms 1.37% 77.12% 6ms 1.37% __ieee754_exp_fma 1ms 0.23% 77.35% 6ms 1.37% __ieee754_pow_fma 6ms 1.37% 78.72% 6ms 1.37% __memcpy_avx_unaligned_erms 0 0% 78.72% 6ms 1.37% __pow 0 0% 78.72% 6ms 1.37% _dl_init 0 0% 78.72% 6ms 1.37% _dl_start_user 5ms 1.14% 79.86% 6ms 1.37% _int_malloc 0 0% 79.86% 6ms 1.37% call_init (inline) 0 0% 79.86% 6ms 1.37% std::pow (inline) 1ms 0.23% 80.09% 5ms 1.14% BidomainSolver::SetupLinearSystem 0 0% 80.09% 5ms 1.14% VecAXPY 0 0% 80.09% 5ms 1.14% VecAXPY_Seq 3ms 0.69% 80.78% 5ms 1.14% __GI___libc_free 5ms 1.14% 81.92% 5ms 1.14% __GI___libc_read 1ms 0.23% 82.15% 5ms 1.14% boost::serialization::singleton::get_instance 5ms 1.14% 83.30% 5ms 1.14% daxpy_ 2ms 0.46% 83.75% 4ms 0.92% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 83.75% 4ms 0.92% VecDestroy_Seq 1ms 0.23% 83.98% 4ms 0.92% __posix_memalign 1ms 0.23% 84.21% 4ms 0.92% _dl_call_fini 0 0% 84.21% 4ms 0.92% _dl_open_relocate_one_object (inline) 0 0% 84.21% 4ms 0.92% _dl_relocate_object 0 0% 84.21% 4ms 0.92% mca_base_var_group_register 0 0% 84.21% 4ms 0.92% mca_base_var_register 0 0% 84.21% 4ms 0.92% opal_hwloc_base_get_topology 0 0% 84.21% 4ms 0.92% orte_ess_base_proc_binding 0 0% 84.21% 3ms 0.69% AbstractCardiacProblem::Initialise 0 0% 84.21% 3ms 0.69% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 84.21% 3ms 0.69% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.21% 3ms 0.69% CxxTest::RealWorldDescription::tearDown 0 0% 84.21% 3ms 0.69% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.21% 3ms 0.69% PetscFinalize 1ms 0.23% 84.44% 3ms 0.69% PetscLayoutSetUp 0 0% 84.44% 3ms 0.69% PetscSetup::tearDownWorld 0 0% 84.44% 3ms 0.69% PetscSetupUtils::CommonFinalize 0 0% 84.44% 3ms 0.69% VecCopy 0 0% 84.44% 3ms 0.69% VecCopy_Seq (partial-inline) 0 0% 84.44% 3ms 0.69% VecCreate_Seq_Private 0 0% 84.44% 3ms 0.69% __GI_exit 0 0% 84.44% 3ms 0.69% __cxa_finalize 0 0% 84.44% 3ms 0.69% __dlclose 0 0% 84.44% 3ms 0.69% __run_exit_handlers 0 0% 84.44% 3ms 0.69% _dl_close 1ms 0.23% 84.67% 3ms 0.69% _dl_close_worker (inline) 0 0% 84.67% 3ms 0.69% _dl_fini 0 0% 84.67% 3ms 0.69% _dl_lookup_symbol_x 0 0% 84.67% 3ms 0.69% _dl_map_object 2ms 0.46% 85.13% 3ms 0.69% boost::numeric::ublas::indexing_matrix_assign 0 0% 85.13% 3ms 0.69% boost::numeric::ublas::matrix_assign (inline) 0 0% 85.13% 3ms 0.69% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 85.13% 3ms 0.69% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.23% 85.35% 3ms 0.69% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 85.35% 3ms 0.69% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 3ms 0.69% 86.04% 3ms 0.69% do_lookup_x 0 0% 86.04% 3ms 0.69% elf_dynamic_do_Rela (inline) 0 0% 86.04% 3ms 0.69% elf_machine_rela (inline) 3ms 0.69% 86.73% 3ms 0.69% exp_inline (inline) 0 0% 86.73% 3ms 0.69% mca_base_component_repository_release 0 0% 86.73% 3ms 0.69% mca_base_components_close 0 0% 86.73% 3ms 0.69% mca_base_framework_close 0 0% 86.73% 3ms 0.69% mca_base_framework_components_open 0 0% 86.73% 3ms 0.69% ompi_mpi_finalize 0 0% 86.73% 3ms 0.69% resolve_map (inline)