File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117262ms, 91.34% of 128379ms total Dropped 1187 nodes (cum <= 641.89ms) flat flat% sum% cum cum% 0 0% 0% 128366ms 100% __libc_start_call_main 0 0% 0% 128366ms 100% __libc_start_main_impl 0 0% 0% 128366ms 100% _start 0 0% 0% 128363ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 128363ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 128363ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 128363ms 100% main 1ms 0.00078% 0.00078% 128322ms 100% AbstractConvergenceTester::Converge 0 0% 0.00078% 128322ms 100% CxxTest::RealTestDescription::run 0 0% 0.00078% 128322ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0.00078% 128322ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0.00078% 128322ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0.00078% 128322ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0016% 0.0023% 127135ms 99.03% AbstractCardiacProblem::Solve 7ms 0.0055% 0.0078% 126290ms 98.37% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.011% 69631ms 54.24% LinearSystem::Solve 1ms 0.00078% 0.012% 69114ms 53.84% KSPSolve 8ms 0.0062% 0.018% 69113ms 53.84% KSPSolve_Private 21ms 0.016% 0.034% 68762ms 53.56% KSPSolve_SYMMLQ 500ms 0.39% 0.42% 47384ms 36.91% AbstractCardiacTissue::SolveCellSystems 1ms 0.00078% 0.42% 39742ms 30.96% PCApply 7ms 0.0055% 0.43% 39727ms 30.95% PCApply_BJacobi_Singleblock 2ms 0.0016% 0.43% 37315ms 29.07% KSPSolve_PREONLY (partial-inline) 998ms 0.78% 1.21% 36982ms 28.81% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.21% 36189ms 28.19% PCApply_ICC 12ms 0.0093% 1.22% 36187ms 28.19% MatSolve 35792ms 27.88% 29.10% 36175ms 28.18% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0023% 29.10% 34324ms 26.74% KSP_PCApply.lto_priv.18 7850ms 6.11% 35.22% 32632ms 25.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 12ms 0.0093% 35.23% 22796ms 17.76% MatMult 310ms 0.24% 35.47% 22784ms 17.75% MatMult_SeqAIJ (partial-inline) 22260ms 17.34% 52.81% 22781ms 17.75% MatMult_SeqAIJ_Inode (inline) 2213ms 1.72% 54.53% 16766ms 13.06% CardiacNewtonSolver::Solve 5526ms 4.30% 58.84% 9968ms 7.76% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1444ms 1.12% 59.96% 9510ms 7.41% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 244ms 0.19% 60.15% 9008ms 7.02% AbstractCardiacTissue::UpdateCaches (inline) 1712ms 1.33% 61.48% 8353ms 6.51% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1182ms 0.92% 62.40% 8078ms 6.29% BidomainSolver::SetupLinearSystem 7756ms 6.04% 68.45% 7756ms 6.04% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1ms 0.00078% 68.45% 7397ms 5.76% KSP_PCApply (partial-inline) 3ms 0.0023% 68.45% 6974ms 5.43% KSPConvergedDefault 4159ms 3.24% 71.69% 4261ms 3.32% __ieee754_log_fma 0 0% 71.69% 4093ms 3.19% boost::numeric::ublas::norm_inf (inline) 2848ms 2.22% 73.91% 4093ms 3.19% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.91% 4093ms 3.19% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.91% 4093ms 3.19% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3454ms 2.69% 76.60% 3454ms 2.69% ddot_ 3ms 0.0023% 76.60% 3378ms 2.63% MatNullSpaceRemove 29ms 0.023% 76.62% 3194ms 2.49% std::pow (inline) 2035ms 1.59% 78.21% 3164ms 2.46% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 418ms 0.33% 78.53% 3152ms 2.46% __pow 2947ms 2.30% 80.83% 2947ms 2.30% __memcpy_avx_unaligned_erms 0 0% 80.83% 2894ms 2.25% PetscMemcpy (inline) 7ms 0.0055% 80.83% 2821ms 2.20% VecDot 0 0% 80.83% 2814ms 2.19% VecDot_Seq 6ms 0.0047% 80.84% 2814ms 2.19% VecXDot_Seq_Private.constprop.0 332ms 0.26% 81.10% 2703ms 2.11% __ieee754_pow_fma 21ms 0.016% 81.11% 2544ms 1.98% VecCopy 1ms 0.00078% 81.11% 2522ms 1.96% VecCopy_Seq (partial-inline) 11ms 0.0086% 81.12% 2271ms 1.77% VecAXPY 8ms 0.0062% 81.13% 2260ms 1.76% VecAXPY_Seq 2241ms 1.75% 82.87% 2241ms 1.75% daxpy_ 3ms 0.0023% 82.88% 2118ms 1.65% VecMDot 10ms 0.0078% 82.89% 2115ms 1.65% VecMXDot_Private 2093ms 1.63% 84.52% 2102ms 1.64% VecMDot_Seq 2ms 0.0016% 84.52% 2016ms 1.57% AbstractFeVolumeIntegralAssembler::DoAssemble 25ms 0.019% 84.54% 1683ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1538ms 1.20% 85.73% 1586ms 1.24% exp_inline (inline) 0 0% 85.73% 1395ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 11ms 0.0086% 85.74% 1257ms 0.98% VecMAXPY 1242ms 0.97% 86.71% 1246ms 0.97% VecMAXPY_Seq 0 0% 86.71% 1241ms 0.97% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.71% 1241ms 0.97% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.71% 1241ms 0.97% boost_numeric_ublas_abs (inline) 1241ms 0.97% 87.68% 1241ms 0.97% std::abs (inline) 6ms 0.0047% 87.68% 1101ms 0.86% boost::numeric::ublas::matrix_assign (inline) 237ms 0.18% 87.87% 1084ms 0.84% boost::numeric::ublas::indexing_matrix_assign 707ms 0.55% 88.42% 1075ms 0.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.42% 1017ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.42% 1016ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00078% 88.42% 1016ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 998ms 0.78% 89.20% 998ms 0.78% [libchaste_heart.so] 2ms 0.0016% 89.20% 941ms 0.73% VecNorm 2ms 0.0016% 89.20% 933ms 0.73% VecNorm_Seq 2ms 0.0016% 89.20% 919ms 0.72% Element::Element 4ms 0.0031% 89.20% 904ms 0.7% VecScale 7ms 0.0055% 89.21% 901ms 0.7% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0031% 89.21% 900ms 0.7% VecScale_Seq 7ms 0.0055% 89.22% 894ms 0.7% BidomainAssembler::ComputeMatrixTerm 894ms 0.7% 89.91% 894ms 0.7% dscal_ 5ms 0.0039% 89.92% 855ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0016% 89.92% 850ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 828ms 0.64% 90.56% 828ms 0.64% __memset_avx2_unaligned_erms 0 0% 90.56% 825ms 0.64% PetscMemzero (inline) 3ms 0.0023% 90.57% 823ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 235ms 0.18% 90.75% 817ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0023% 90.75% 772ms 0.6% BidomainProblem::WriteOneStep 6ms 0.0047% 90.76% 765ms 0.6% VecDuplicate 750ms 0.58% 91.34% 750ms 0.58% log_inline (inline) 0 0% 91.34% 654ms 0.51% VecNorm_MPI 0 0% 91.34% 654ms 0.51% VecNorm_MPI_Default.constprop.0