File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 247ms, 90.48% of 273ms total Dropped 134 nodes (cum <= 1.36ms) flat flat% sum% cum cum% 0 0% 0% 268ms 98.17% __libc_start_call_main 0 0% 0% 268ms 98.17% __libc_start_main_impl 0 0% 0% 268ms 98.17% _start 0 0% 0% 266ms 97.44% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 266ms 97.44% CxxTest::TestRunner::runAllTests 0 0% 0% 266ms 97.44% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 266ms 97.44% main 0 0% 0% 231ms 84.62% CxxTest::RealTestDescription::run 0 0% 0% 231ms 84.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 231ms 84.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 231ms 84.62% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 231ms 84.62% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 228ms 83.52% AbstractCardiacProblem::Solve 0 0% 0% 228ms 83.52% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 203ms 74.36% LinearSystem::Solve 0 0% 0% 202ms 73.99% KSPSolve 0 0% 0% 202ms 73.99% KSPSolve_CG 0 0% 0% 202ms 73.99% KSPSolve_Private 0 0% 0% 111ms 40.66% KSP_PCApply.lto_priv.7 0 0% 0% 108ms 39.56% PCApply 0 0% 0% 108ms 39.56% PCApply_BJacobi_Singleblock 0 0% 0% 92ms 33.70% KSPSolve_PREONLY (partial-inline) 0 0% 0% 85ms 31.14% MatSolve 84ms 30.77% 30.77% 85ms 31.14% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 30.77% 85ms 31.14% PCApply_ICC 0 0% 30.77% 48ms 17.58% MatMult 3ms 1.10% 31.87% 48ms 17.58% MatMult_SeqAIJ (partial-inline) 45ms 16.48% 48.35% 46ms 16.85% MatMult_SeqAIJ_Inode (inline) 34ms 12.45% 60.81% 34ms 12.45% ddot_ 0 0% 60.81% 32ms 11.72% CxxTest::RealWorldDescription::setUp 0 0% 60.81% 32ms 11.72% PMPI_Init_thread 0 0% 60.81% 32ms 11.72% PetscInitialize 0 0% 60.81% 32ms 11.72% PetscSetup::setUpWorld 0 0% 60.81% 32ms 11.72% PetscSetupUtils::CommonSetup 0 0% 60.81% 32ms 11.72% PetscSetupUtils::InitialisePetsc 0 0% 60.81% 32ms 11.72% ompi_mpi_init 0 0% 60.81% 27ms 9.89% 0 0% 60.81% 23ms 8.42% AbstractCardiacTissue::SolveCellSystems 0 0% 60.81% 23ms 8.42% VecTDot 0 0% 60.81% 23ms 8.42% VecTDot_Seq 0 0% 60.81% 23ms 8.42% VecXDot_Seq_Private.constprop.0 0 0% 60.81% 21ms 7.69% orte_init 0 0% 60.81% 18ms 6.59% MatNullSpaceRemove 0 0% 60.81% 16ms 5.86% hwloc_topology_load 1ms 0.37% 61.17% 15ms 5.49% hwloc_linux_get_tid_last_cpu_location 0 0% 61.17% 14ms 5.13% AbstractCardiacCell::ComputeExceptVoltage 0 0% 61.17% 14ms 5.13% __GI__dl_catch_exception 0 0% 61.17% 14ms 5.13% ___dlopen 0 0% 61.17% 14ms 5.13% _dl_catch_error 0 0% 61.17% 14ms 5.13% _dl_open 0 0% 61.17% 14ms 5.13% _dlerror_run 0 0% 61.17% 14ms 5.13% dl_open_worker 0 0% 61.17% 14ms 5.13% dlopen_doit 0 0% 61.17% 14ms 5.13% dlopen_implementation (inline) 0 0% 61.17% 13ms 4.76% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 61.17% 13ms 4.76% mca_base_component_find 0 0% 61.17% 13ms 4.76% mca_base_component_repository_open 0 0% 61.17% 13ms 4.76% mca_base_framework_components_register 0 0% 61.17% 13ms 4.76% mca_base_framework_open 0 0% 61.17% 13ms 4.76% mca_base_framework_register 0 0% 61.17% 13ms 4.76% opal_stackframe_output 3ms 1.10% 62.27% 12ms 4.40% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 62.27% 12ms 4.40% EulerIvpOdeSolver::CalculateNextYValue 0 0% 62.27% 11ms 4.03% VecNorm 0 0% 62.27% 11ms 4.03% VecNorm_Seq 0 0% 62.27% 10ms 3.66% VecMDot 10ms 3.66% 65.93% 10ms 3.66% VecMDot_Seq 0 0% 65.93% 10ms 3.66% VecMXDot_Private 10ms 3.66% 69.60% 10ms 3.66% __GI___libc_read 0 0% 69.60% 10ms 3.66% _dl_init 0 0% 69.60% 10ms 3.66% call_init (inline) 0 0% 69.60% 9ms 3.30% KSP_PCApply (partial-inline) 0 0% 69.60% 9ms 3.30% dl_open_worker_begin 0 0% 69.60% 8ms 2.93% VecMAXPY 8ms 2.93% 72.53% 8ms 2.93% VecMAXPY_Seq 2ms 0.73% 73.26% 8ms 2.93% __GI___exp 0 0% 73.26% 8ms 2.93% _dl_map_object 0 0% 73.26% 7ms 2.56% AbstractCardiacTissue::UpdateCaches (inline) 3ms 1.10% 74.36% 7ms 2.56% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.36% 7ms 2.56% opal_hwloc_base_get_topology 0 0% 74.36% 7ms 2.56% orte_ess_base_proc_binding 0 0% 74.36% 6ms 2.20% mca_base_framework_components_open 0 0% 74.36% 6ms 2.20% mca_topo_base_dist_graph_neighbors_count 5ms 1.83% 76.19% 5ms 1.83% __ieee754_exp_fma 0 0% 76.19% 5ms 1.83% _dl_start_user 0 0% 76.19% 4ms 1.47% VecAXPY 0 0% 76.19% 4ms 1.47% VecAXPY_Seq 0 0% 76.19% 4ms 1.47% VecAYPX 3ms 1.10% 77.29% 4ms 1.47% VecAYPX_Seq 0 0% 77.29% 4ms 1.47% VecDuplicate 1ms 0.37% 77.66% 4ms 1.47% VecDuplicate_Seq 0 0% 77.66% 4ms 1.47% _dl_map_object_deps 2ms 0.73% 78.39% 4ms 1.47% boost::serialization::singleton::get_instance 4ms 1.47% 79.85% 4ms 1.47% daxpy_ 0 0% 79.85% 4ms 1.47% openaux 1ms 0.37% 80.22% 4ms 1.47% usleep 0 0% 80.22% 3ms 1.10% AbstractCardiacProblem::Initialise 0 0% 80.22% 3ms 1.10% CxxTest::RealWorldDescription::tearDown 0 0% 80.22% 3ms 1.10% PetscFinalize 0 0% 80.22% 3ms 1.10% PetscSetup::tearDownWorld 0 0% 80.22% 3ms 1.10% PetscSetupUtils::CommonFinalize 3ms 1.10% 81.32% 3ms 1.10% [libchaste_heart.so] 3ms 1.10% 82.42% 3ms 1.10% __GI___clock_nanosleep 0 0% 82.42% 3ms 1.10% __GI___libc_free 1ms 0.37% 82.78% 3ms 1.10% __GI___libc_malloc 0 0% 82.78% 3ms 1.10% __GI___nanosleep 0 0% 82.78% 3ms 1.10% _dl_map_object_from_fd 1ms 0.37% 83.15% 3ms 1.10% _dl_name_match_p 2ms 0.73% 83.88% 3ms 1.10% _int_free 0 0% 83.88% 3ms 1.10% ompi_mpi_finalize 0 0% 83.88% 2ms 0.73% BidomainSolver::SetupLinearSystem 2ms 0.73% 84.62% 2ms 0.73% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.62% 2ms 0.73% KSPConvergedDefault 0 0% 84.62% 2ms 0.73% KSPConvergedReasonViewFromOptions 0 0% 84.62% 2ms 0.73% PetscHeaderDestroy_Private 0 0% 84.62% 2ms 0.73% PetscMallocA 0 0% 84.62% 2ms 0.73% PetscMallocAlign (partial-inline) 0 0% 84.62% 2ms 0.73% PetscMemzero (inline) 1ms 0.37% 84.98% 2ms 0.73% PetscOptionsFindPair 0 0% 84.98% 2ms 0.73% PetscOptionsGetViewer 0 0% 84.98% 2ms 0.73% VecCreate 0 0% 84.98% 2ms 0.73% VecDestroy 0 0% 84.98% 2ms 0.73% [hwloc_pci.so] 0 0% 84.98% 2ms 0.73% [libpciaccess.so.0.11.1] 0 0% 84.98% 2ms 0.73% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.98% 2ms 0.73% __GI_exit 0 0% 84.98% 2ms 0.73% __cxa_finalize 1ms 0.37% 85.35% 2ms 0.73% __ieee754_pow_fma 2ms 0.73% 86.08% 2ms 0.73% __memcpy_avx512_unaligned_erms 2ms 0.73% 86.81% 2ms 0.73% __memset_avx512_unaligned_erms 0 0% 86.81% 2ms 0.73% __pow 0 0% 86.81% 2ms 0.73% __run_exit_handlers 2ms 0.73% 87.55% 2ms 0.73% __strcmp_evex 0 0% 87.55% 2ms 0.73% _dl_call_fini 0 0% 87.55% 2ms 0.73% _dl_fini 0 0% 87.55% 2ms 0.73% _dl_map_segments (inline) 1ms 0.37% 87.91% 2ms 0.73% _int_malloc 0 0% 87.91% 2ms 0.73% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.37% 88.28% 2ms 0.73% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.28% 2ms 0.73% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.28% 2ms 0.73% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 2ms 0.73% 89.01% 2ms 0.73% malloc_consolidate 0 0% 89.01% 2ms 0.73% mca_base_var_cache_files 2ms 0.73% 89.74% 2ms 0.73% memset 0 0% 89.74% 2ms 0.73% open_verify 0 0% 89.74% 2ms 0.73% orte_finalize 0 0% 89.74% 2ms 0.73% pci_get_strings 0 0% 89.74% 2ms 0.73% std::pow (inline) 2ms 0.73% 90.48% 2ms 0.73% strcmp