File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 3208ms, 88.30% of 3633ms total Dropped 414 nodes (cum <= 18.16ms) flat flat% sum% cum cum% 0 0% 0% 3624ms 99.75% __libc_start_call_main 0 0% 0% 3624ms 99.75% __libc_start_main_impl 0 0% 0% 3624ms 99.75% _start 0 0% 0% 3621ms 99.67% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 3621ms 99.67% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 3621ms 99.67% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 3621ms 99.67% main 0 0% 0% 3591ms 98.84% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 3591ms 98.84% CxxTest::TestRunner::runTest (inline) 0 0% 0% 3591ms 98.84% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 3584ms 98.65% AbstractCardiacProblem::Solve 3ms 0.083% 0.083% 3577ms 98.46% AbstractDynamicLinearPdeSolver::Solve 19ms 0.52% 0.61% 1871ms 51.50% AbstractCardiacTissue::SolveCellSystems 0 0% 0.61% 1318ms 36.28% LinearSystem::Solve 0 0% 0.61% 1296ms 35.67% KSPSolve 2ms 0.055% 0.66% 1296ms 35.67% KSPSolve_Private 0 0% 0.66% 1271ms 34.98% KSPSolve_SYMMLQ 16ms 0.44% 1.10% 1042ms 28.68% AbstractCardiacCell::ComputeExceptVoltage 23ms 0.63% 1.73% 949ms 26.12% AbstractOneStepIvpOdeSolver::InternalSolve 98ms 2.70% 4.43% 792ms 21.80% EulerIvpOdeSolver::CalculateNextYValue 4ms 0.11% 4.54% 743ms 20.45% PCApply 1ms 0.028% 4.57% 736ms 20.26% PCApply_BJacobi_Singleblock 231ms 6.36% 10.93% 691ms 19.02% CellLuoRudy1991FromCellML::EvaluateYDerivatives 22ms 0.61% 11.53% 658ms 18.11% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 11.53% 629ms 17.31% KSPSolve_PREONLY (partial-inline) 259ms 7.13% 18.66% 610ms 16.79% CellLuoRudy1991FromCellML::GetIIonic 4ms 0.11% 18.77% 596ms 16.41% MatSolve 0 0% 18.77% 596ms 16.41% PCApply_ICC 585ms 16.10% 34.87% 589ms 16.21% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.11% 34.98% 570ms 15.69% MatMult 0 0% 34.98% 560ms 15.41% KSP_PCApply.lto_priv.18 3ms 0.083% 35.07% 559ms 15.39% MatMult_SeqAIJ 552ms 15.19% 50.26% 559ms 15.39% MatMult_SeqAIJ_Inode (inline) 213ms 5.86% 56.12% 545ms 15.00% __GI___exp 48ms 1.32% 57.45% 351ms 9.66% BidomainSolver::SetupLinearSystem 284ms 7.82% 65.26% 284ms 7.82% __ieee754_exp_fma 0 0% 65.26% 236ms 6.50% KSPConvergedDefault 0 0% 65.26% 234ms 6.44% KSP_PCApply (partial-inline) 9ms 0.25% 65.51% 200ms 5.51% std::pow (inline) 16ms 0.44% 65.95% 190ms 5.23% __pow 8ms 0.22% 66.17% 172ms 4.73% __ieee754_pow_fma 82ms 2.26% 68.43% 130ms 3.58% CellLuoRudy1991FromCellML::VerifyStateVariables 110ms 3.03% 71.46% 110ms 3.03% [libchaste_heart.so] 83ms 2.28% 73.74% 90ms 2.48% exp_inline (inline) 1ms 0.028% 73.77% 89ms 2.45% MatNullSpaceRemove 74ms 2.04% 75.81% 74ms 2.04% log_inline (inline) 20ms 0.55% 76.36% 61ms 1.68% TimeStepper::TimeStepper 57ms 1.57% 77.92% 57ms 1.57% [libm.so.6] 18ms 0.5% 78.42% 56ms 1.54% MPI_Wtime 56ms 1.54% 79.96% 56ms 1.54% TimeStepper::CalculateNextTime 55ms 1.51% 81.48% 55ms 1.51% ddot_ 0 0% 81.48% 50ms 1.38% VecDuplicate 0 0% 81.48% 45ms 1.24% VecMDot 6ms 0.17% 81.64% 45ms 1.24% VecMXDot_Private 5ms 0.14% 81.78% 44ms 1.21% VecAXPY 0 0% 81.78% 43ms 1.18% VecMAXPY 11ms 0.3% 82.08% 40ms 1.10% PetscLogEventEndDefault 7ms 0.19% 82.27% 39ms 1.07% PetscLogEventBeginDefault 1ms 0.028% 82.30% 38ms 1.05% VecCopy 1ms 0.028% 82.33% 38ms 1.05% VecDot 13ms 0.36% 82.69% 36ms 0.99% TimeStepper::AdvanceOneTimeStep 35ms 0.96% 83.65% 35ms 0.96% [[vdso]] 0 0% 83.65% 35ms 0.96% __GI___clock_gettime 33ms 0.91% 84.56% 34ms 0.94% VecMAXPY_Seq 34ms 0.94% 85.49% 34ms 0.94% __memcpy_avx512_unaligned_erms 1ms 0.028% 85.52% 33ms 0.91% VecDestroy 0 0% 85.52% 33ms 0.91% VecDot_Seq 0 0% 85.52% 33ms 0.91% VecXDot_Seq_Private.constprop.0 10ms 0.28% 85.80% 33ms 0.91% std::__cxx11::basic_string::basic_string 1ms 0.028% 85.82% 32ms 0.88% VecNorm 0 0% 85.82% 30ms 0.83% VecDuplicate_Seq 28ms 0.77% 86.60% 29ms 0.8% VecMDot_Seq 0 0% 86.60% 29ms 0.8% VecNorm_Seq 0 0% 86.60% 28ms 0.77% CxxTest::RealWorldDescription::setUp 0 0% 86.60% 28ms 0.77% PMPI_Init_thread 0 0% 86.60% 28ms 0.77% PetscInitialize 0 0% 86.60% 28ms 0.77% PetscSetup::setUpWorld 0 0% 86.60% 28ms 0.77% PetscSetupUtils::CommonSetup 0 0% 86.60% 28ms 0.77% PetscSetupUtils::InitialisePetsc 0 0% 86.60% 28ms 0.77% ompi_mpi_init 3ms 0.083% 86.68% 27ms 0.74% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 86.68% 27ms 0.74% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 86.68% 25ms 0.69% 0 0% 86.68% 25ms 0.69% VecAXPY_Seq 6ms 0.17% 86.84% 24ms 0.66% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 86.84% 23ms 0.63% PetscMemcpy (inline) 0 0% 86.84% 23ms 0.63% VecCreate 23ms 0.63% 87.48% 23ms 0.63% daxpy_ 17ms 0.47% 87.94% 20ms 0.55% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 3ms 0.083% 88.03% 20ms 0.55% PMPI_Comm_get_attr 2ms 0.055% 88.08% 20ms 0.55% VecCopy_Seq (partial-inline) 0 0% 88.08% 20ms 0.55% VecDuplicate_MPI 8ms 0.22% 88.30% 19ms 0.52% std::char_traits::length (inline)