File: Test3dBidomainProblemWithPermForEfficiency Type: cpu Showing nodes accounting for 3357ms, 89.00% of 3772ms total Dropped 407 nodes (cum <= 18.86ms) flat flat% sum% cum cum% 0 0% 0% 3766ms 99.84% __libc_start_call_main 0 0% 0% 3766ms 99.84% __libc_start_main_impl 0 0% 0% 3766ms 99.84% _start 0 0% 0% 3764ms 99.79% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 3764ms 99.79% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 3764ms 99.79% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 3764ms 99.79% main 0 0% 0% 3729ms 98.86% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 3729ms 98.86% CxxTest::TestRunner::runTest (inline) 0 0% 0% 3729ms 98.86% Test3dBidomainProblemWithPermForEfficiency::TestBidomain3d 0 0% 0% 3724ms 98.73% AbstractCardiacProblem::Solve 2ms 0.053% 0.053% 3715ms 98.49% AbstractDynamicLinearPdeSolver::Solve 16ms 0.42% 0.48% 1867ms 49.50% AbstractCardiacTissue::SolveCellSystems 0 0% 0.48% 1470ms 38.97% LinearSystem::Solve 1ms 0.027% 0.5% 1444ms 38.28% KSPSolve 4ms 0.11% 0.61% 1443ms 38.26% KSPSolve_Private 2ms 0.053% 0.66% 1413ms 37.46% KSPSolve_SYMMLQ 12ms 0.32% 0.98% 1050ms 27.84% AbstractCardiacCell::ComputeExceptVoltage 23ms 0.61% 1.59% 956ms 25.34% AbstractOneStepIvpOdeSolver::InternalSolve 5ms 0.13% 1.72% 814ms 21.58% PCApply 0 0% 1.72% 806ms 21.37% PCApply_BJacobi_Singleblock 105ms 2.78% 4.51% 787ms 20.86% EulerIvpOdeSolver::CalculateNextYValue 0 0% 4.51% 708ms 18.77% KSPSolve_PREONLY (partial-inline) 214ms 5.67% 10.18% 670ms 17.76% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.18% 669ms 17.74% MatMult 3ms 0.08% 10.26% 669ms 17.74% MatMult_SeqAIJ 661ms 17.52% 27.78% 669ms 17.74% MatMult_SeqAIJ_Inode (inline) 3ms 0.08% 27.86% 652ms 17.29% MatSolve 0 0% 27.86% 652ms 17.29% PCApply_ICC 640ms 16.97% 44.83% 642ms 17.02% MatSolve_SeqSBAIJ_1_NaturalOrdering 14ms 0.37% 45.20% 640ms 16.97% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 45.20% 608ms 16.12% KSP_PCApply.lto_priv.18 274ms 7.26% 52.47% 604ms 16.01% CellLuoRudy1991FromCellML::GetIIonic 163ms 4.32% 56.79% 525ms 13.92% __GI___exp 31ms 0.82% 57.61% 335ms 8.88% BidomainSolver::SetupLinearSystem 303ms 8.03% 65.64% 305ms 8.09% __ieee754_exp_fma 0 0% 65.64% 272ms 7.21% KSP_PCApply (partial-inline) 2ms 0.053% 65.69% 267ms 7.08% KSPConvergedDefault 10ms 0.27% 65.96% 173ms 4.59% std::pow (inline) 7ms 0.19% 66.15% 162ms 4.29% __pow 12ms 0.32% 66.46% 154ms 4.08% __ieee754_pow_fma 72ms 1.91% 68.37% 125ms 3.31% CellLuoRudy1991FromCellML::VerifyStateVariables 122ms 3.23% 71.61% 122ms 3.23% [libchaste_heart.so] 2ms 0.053% 71.66% 113ms 3.00% MatNullSpaceRemove 61ms 1.62% 73.28% 74ms 1.96% exp_inline (inline) 64ms 1.70% 74.97% 64ms 1.70% log_inline (inline) 2ms 0.053% 75.03% 62ms 1.64% VecDuplicate 0 0% 75.03% 62ms 1.64% VecMDot 3ms 0.08% 75.11% 62ms 1.64% VecMXDot_Private 61ms 1.62% 76.72% 61ms 1.62% [libm.so.6] 23ms 0.61% 77.33% 60ms 1.59% TimeStepper::TimeStepper 22ms 0.58% 77.92% 58ms 1.54% MPI_Wtime 55ms 1.46% 79.37% 55ms 1.46% TimeStepper::CalculateNextTime 4ms 0.11% 79.48% 49ms 1.30% VecMAXPY 46ms 1.22% 80.70% 47ms 1.25% VecMDot_Seq 42ms 1.11% 81.81% 42ms 1.11% ddot_ 8ms 0.21% 82.03% 40ms 1.06% PetscLogEventEndDefault 38ms 1.01% 83.03% 38ms 1.01% [[vdso]] 8ms 0.21% 83.24% 37ms 0.98% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 83.24% 37ms 0.98% AbstractBidomainSolver::FinaliseLinearSystem 5ms 0.13% 83.38% 36ms 0.95% PetscLogEventBeginDefault 0 0% 83.38% 36ms 0.95% __GI___clock_gettime 12ms 0.32% 83.70% 33ms 0.87% TimeStepper::AdvanceOneTimeStep 32ms 0.85% 84.54% 33ms 0.87% VecMAXPY_Seq 33ms 0.87% 85.42% 33ms 0.87% [libchaste_ode.so] 6ms 0.16% 85.58% 32ms 0.85% VecCopy 1ms 0.027% 85.60% 32ms 0.85% VecDuplicate_Seq 0 0% 85.60% 31ms 0.82% CxxTest::RealWorldDescription::setUp 0 0% 85.60% 31ms 0.82% PetscInitialize 0 0% 85.60% 31ms 0.82% PetscSetup::setUpWorld 0 0% 85.60% 31ms 0.82% PetscSetupUtils::CommonSetup 0 0% 85.60% 31ms 0.82% PetscSetupUtils::InitialisePetsc 1ms 0.027% 85.63% 31ms 0.82% VecAXPY 1ms 0.027% 85.66% 31ms 0.82% VecNorm 13ms 0.34% 86.00% 31ms 0.82% std::__cxx11::basic_string::basic_string 0 0% 86.00% 30ms 0.8% PMPI_Init_thread 0 0% 86.00% 30ms 0.8% VecCreate 0 0% 86.00% 30ms 0.8% VecDestroy 2ms 0.053% 86.06% 30ms 0.8% VecDot 0 0% 86.06% 30ms 0.8% ompi_mpi_init 2ms 0.053% 86.11% 28ms 0.74% VecDuplicate_MPI 1ms 0.027% 86.13% 26ms 0.69% PetscMallocA 0 0% 86.13% 26ms 0.69% VecDot_Seq 0 0% 86.13% 26ms 0.69% VecXDot_Seq_Private.constprop.0 1ms 0.027% 86.16% 25ms 0.66% 10ms 0.27% 86.43% 25ms 0.66% AbstractCardiacCell::SetVoltage (partial-inline) 15ms 0.4% 86.82% 25ms 0.66% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.027% 86.85% 25ms 0.66% PetscMallocAlign 25ms 0.66% 87.51% 25ms 0.66% __memcpy_avx512_unaligned_erms 0 0% 87.51% 24ms 0.64% VecNorm_Seq 0 0% 87.51% 22ms 0.58% VecAXPY_Seq 22ms 0.58% 88.10% 22ms 0.58% __ieee754_log_fma 22ms 0.58% 88.68% 22ms 0.58% daxpy_ 10ms 0.27% 88.94% 20ms 0.53% __GI___libc_malloc 2ms 0.053% 89.00% 19ms 0.5% __posix_memalign 0 0% 89.00% 19ms 0.5% orte_init