File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 10563ms, 88.31% of 11961ms total Dropped 651 nodes (cum <= 59.80ms) flat flat% sum% cum cum% 0 0% 0% 11955ms 99.95% __libc_start_call_main 0 0% 0% 11955ms 99.95% __libc_start_main_impl 0 0% 0% 11955ms 99.95% _start 0 0% 0% 11953ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11953ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11953ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11953ms 99.93% main 0 0% 0% 11920ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11920ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11920ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 11901ms 99.50% AbstractCardiacProblem::Solve 0 0% 0% 8923ms 74.60% AbstractDynamicLinearPdeSolver::Solve 63ms 0.53% 0.53% 7406ms 61.92% AbstractCardiacTissue::SolveCellSystems 46ms 0.38% 0.91% 4564ms 38.16% AbstractCardiacCell::ComputeExceptVoltage 101ms 0.84% 1.76% 4131ms 34.54% AbstractOneStepIvpOdeSolver::InternalSolve 115ms 0.96% 2.72% 3518ms 29.41% EulerIvpOdeSolver::CalculateNextYValue 916ms 7.66% 10.38% 3371ms 28.18% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.38% 2926ms 24.46% MonodomainProblem::WriteOneStep 0 0% 10.38% 2859ms 23.90% Hdf5DataWriter::PutVector 0 0% 10.38% 2833ms 23.69% H5Dwrite 0 0% 10.38% 2819ms 23.57% H5D__write 1005ms 8.40% 18.78% 2711ms 22.67% __GI___exp 81ms 0.68% 19.45% 2088ms 17.46% AbstractCardiacTissue::UpdateCaches (inline) 548ms 4.58% 24.04% 1949ms 16.29% CellLuoRudy1991FromCellML::GetIIonic 0 0% 24.04% 1527ms 12.77% H5D__chunk_collective_write 13ms 0.11% 24.15% 1527ms 12.77% H5F_set_coll_metadata_reads 1442ms 12.06% 36.20% 1466ms 12.26% __ieee754_exp_fma 6ms 0.05% 36.25% 1330ms 11.12% H5FD_s3comms_uriencode 3ms 0.025% 36.28% 1244ms 10.40% H5D__chunk_cacheable 380ms 3.18% 39.45% 1134ms 9.48% H5S_select_iterate 22ms 0.18% 39.64% 1034ms 8.64% 0 0% 39.64% 1020ms 8.53% H5FD_write 0 0% 39.64% 1020ms 8.53% H5F__accum_write 0 0% 39.64% 1020ms 8.53% H5F_block_write 0 0% 39.64% 1020ms 8.53% H5PB_write 0 0% 39.64% 968ms 8.09% H5D__mpio_select_write 0 0% 39.64% 914ms 7.64% PMPI_File_write_at_all 901ms 7.53% 47.17% 903ms 7.55% __GI_pwritev64 3ms 0.025% 47.20% 883ms 7.38% LinearSystem::Solve 0 0% 47.20% 832ms 6.96% KSPSolve 0 0% 47.20% 832ms 6.96% KSPSolve_Private 1ms 0.0084% 47.20% 828ms 6.92% KSPSolve_CG 21ms 0.18% 47.38% 774ms 6.47% std::pow (inline) 85ms 0.71% 48.09% 764ms 6.39% H5D__chunk_set_sizes 42ms 0.35% 48.44% 746ms 6.24% __pow 40ms 0.33% 48.78% 697ms 5.83% __ieee754_pow_fma 230ms 1.92% 50.70% 621ms 5.19% MonodomainSolver::SetupLinearSystem 386ms 3.23% 53.93% 585ms 4.89% CellLuoRudy1991FromCellML::VerifyStateVariables 482ms 4.03% 57.96% 482ms 4.03% [libchaste_heart.so] 0 0% 57.96% 479ms 4.00% PCApply 1ms 0.0084% 57.96% 478ms 4.00% PCApply_BJacobi_Singleblock 0 0% 57.96% 466ms 3.90% KSPSolve_PREONLY 5ms 0.042% 58.01% 464ms 3.88% MatSolve 0 0% 58.01% 464ms 3.88% PCApply_ICC 456ms 3.81% 61.82% 459ms 3.84% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 61.82% 393ms 3.29% MatMult 393ms 3.29% 65.10% 393ms 3.29% MatMult_SeqAIJ 57ms 0.48% 65.58% 385ms 3.22% H5S_mpio_space_type 336ms 2.81% 68.39% 336ms 2.81% log_inline (inline) 29ms 0.24% 68.63% 331ms 2.77% H5VM_chunk_index 0 0% 68.63% 316ms 2.64% KSP_PCApply.lto_priv.7 273ms 2.28% 70.91% 311ms 2.60% exp_inline (inline) 269ms 2.25% 73.16% 269ms 2.25% [libm.so.6] 258ms 2.16% 75.32% 258ms 2.16% H5VM_chunk_index_scaled 87ms 0.73% 76.05% 256ms 2.14% TimeStepper::TimeStepper 2ms 0.017% 76.06% 207ms 1.73% KSPConvergedDefault 75ms 0.63% 76.69% 170ms 1.42% __GI___libc_malloc 6ms 0.05% 76.74% 167ms 1.40% MPI_Type_free 0 0% 76.74% 164ms 1.37% KSP_PCApply 16ms 0.13% 76.87% 164ms 1.37% ompi_datatype_destroy 154ms 1.29% 78.16% 154ms 1.29% TimeStepper::CalculateNextTime 7ms 0.059% 78.22% 148ms 1.24% ompi_datatype_create 49ms 0.41% 78.63% 140ms 1.17% ompi_datatype_release_args 1ms 0.0084% 78.64% 140ms 1.17% ompi_info_register_framework_params 14ms 0.12% 78.76% 138ms 1.15% __GI___libc_free 62ms 0.52% 79.27% 124ms 1.04% H5S_hyper_add_span_element 77ms 0.64% 79.92% 124ms 1.04% _int_free 37ms 0.31% 80.23% 122ms 1.02% H5S_set_version 36ms 0.3% 80.53% 118ms 0.99% AbstractCardiacCell::SetVoltage (partial-inline) 94ms 0.79% 81.31% 118ms 0.99% _int_malloc 65ms 0.54% 81.86% 112ms 0.94% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 109ms 0.91% 82.77% 109ms 0.91% [libchaste_ode.so] 39ms 0.33% 83.10% 103ms 0.86% std::__cxx11::basic_string::basic_string 74ms 0.62% 83.71% 97ms 0.81% AbstractOneStepIvpOdeSolver::Solve 2ms 0.017% 83.73% 91ms 0.76% ompi_datatype_duplicate 2ms 0.017% 83.75% 90ms 0.75% PMPI_Type_create_resized 86ms 0.72% 84.47% 86ms 0.72% __ieee754_log_fma 29ms 0.24% 84.71% 85ms 0.71% H5VM_array_calc 82ms 0.69% 85.39% 82ms 0.69% __memcpy_avx512_unaligned_erms 75ms 0.63% 86.02% 75ms 0.63% ddot_ 0 0% 86.02% 75ms 0.63% std::vector::_M_assign_aux (inline) 0 0% 86.02% 75ms 0.63% std::vector::assign (inline) 0 0% 86.02% 73ms 0.61% PMPI_File_set_view 37ms 0.31% 86.33% 73ms 0.61% __libc_calloc 51ms 0.43% 86.76% 72ms 0.6% TimeStepper::AdvanceOneTimeStep 24ms 0.2% 86.96% 68ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0084% 86.97% 67ms 0.56% Hdf5DataWriter::PutUnlimitedVariable 28ms 0.23% 87.20% 66ms 0.55% ompi_datatype_set_args 48ms 0.4% 87.60% 62ms 0.52% AbstractParameterisedSystem::GetAnyVariable 62ms 0.52% 88.12% 62ms 0.52% asuint64 (inline) 20ms 0.17% 88.29% 61ms 0.51% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 3ms 0.025% 88.31% 60ms 0.5% opal_datatype_create_desc