File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 390ms, 86.86% of 449ms total Dropped 220 nodes (cum <= 2.25ms) flat flat% sum% cum cum% 0 0% 0% 440ms 98.00% __libc_start_call_main 0 0% 0% 440ms 98.00% __libc_start_main_impl 0 0% 0% 440ms 98.00% _start 0 0% 0% 437ms 97.33% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 437ms 97.33% CxxTest::TestRunner::runAllTests 0 0% 0% 437ms 97.33% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 437ms 97.33% main 0 0% 0% 398ms 88.64% CxxTest::RealTestDescription::run 0 0% 0% 398ms 88.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 398ms 88.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 398ms 88.64% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 398ms 88.64% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 394ms 87.75% AbstractCardiacProblem::Solve 0 0% 0% 391ms 87.08% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 357ms 79.51% LinearSystem::Solve 0 0% 0% 356ms 79.29% KSPSolve 1ms 0.22% 0.22% 356ms 79.29% KSPSolve_CG 1ms 0.22% 0.45% 356ms 79.29% KSPSolve_Private 0 0% 0.45% 214ms 47.66% KSP_PCApply.lto_priv.7 0 0% 0.45% 205ms 45.66% PCApply 0 0% 0.45% 204ms 45.43% PCApply_BJacobi_Singleblock 0 0% 0.45% 180ms 40.09% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 164ms 36.53% MatSolve 164ms 36.53% 36.97% 164ms 36.53% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 36.97% 164ms 36.53% PCApply_ICC 0 0% 36.97% 77ms 17.15% MatMult 8ms 1.78% 38.75% 77ms 17.15% MatMult_SeqAIJ (partial-inline) 69ms 15.37% 54.12% 76ms 16.93% MatMult_SeqAIJ_Inode (inline) 47ms 10.47% 64.59% 47ms 10.47% ddot_ 0 0% 64.59% 35ms 7.80% CxxTest::RealWorldDescription::setUp 0 0% 64.59% 35ms 7.80% PetscInitialize 0 0% 64.59% 35ms 7.80% PetscSetup::setUpWorld 0 0% 64.59% 35ms 7.80% PetscSetupUtils::CommonSetup 0 0% 64.59% 35ms 7.80% PetscSetupUtils::InitialisePetsc 0 0% 64.59% 34ms 7.57% PMPI_Init_thread 0 0% 64.59% 34ms 7.57% ompi_mpi_init 0 0% 64.59% 32ms 7.13% AbstractCardiacTissue::SolveCellSystems 0 0% 64.59% 32ms 7.13% MatNullSpaceRemove 3ms 0.67% 65.26% 30ms 6.68% 1ms 0.22% 65.48% 30ms 6.68% VecTDot 0 0% 65.48% 29ms 6.46% VecTDot_Seq 0 0% 65.48% 29ms 6.46% VecXDot_Seq_Private.constprop.0 0 0% 65.48% 23ms 5.12% orte_init 0 0% 65.48% 20ms 4.45% VecMDot 20ms 4.45% 69.93% 20ms 4.45% VecMDot_Seq 0 0% 69.93% 20ms 4.45% VecMXDot_Private 0 0% 69.93% 19ms 4.23% AbstractCardiacCell::ComputeExceptVoltage 0 0% 69.93% 19ms 4.23% KSP_PCApply (partial-inline) 0 0% 69.93% 18ms 4.01% VecNorm 0 0% 69.93% 18ms 4.01% VecNorm_Seq 0 0% 69.93% 17ms 3.79% AbstractOneStepIvpOdeSolver::InternalSolve 4ms 0.89% 70.82% 16ms 3.56% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.82% 16ms 3.56% EulerIvpOdeSolver::CalculateNextYValue 9ms 2.00% 72.83% 15ms 3.34% __GI___exp 0 0% 72.83% 14ms 3.12% __GI__dl_catch_exception 0 0% 72.83% 14ms 3.12% _dl_catch_error 0 0% 72.83% 14ms 3.12% _dlerror_run 0 0% 72.83% 14ms 3.12% hwloc_topology_load 0 0% 72.83% 13ms 2.90% opal_stackframe_output 0 0% 72.83% 12ms 2.67% VecMAXPY 11ms 2.45% 75.28% 12ms 2.67% VecMAXPY_Seq 0 0% 75.28% 12ms 2.67% hwloc_linux_get_tid_last_cpu_location 0 0% 75.28% 11ms 2.45% VecDuplicate 0 0% 75.28% 11ms 2.45% VecDuplicate_Seq 0 0% 75.28% 11ms 2.45% mca_base_framework_open 0 0% 75.28% 10ms 2.23% mca_base_framework_components_register 0 0% 75.28% 10ms 2.23% mca_base_framework_register 0 0% 75.28% 9ms 2.00% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.89% 76.17% 9ms 2.00% CellLuoRudy1991FromCellML::GetIIonic 0 0% 76.17% 9ms 2.00% ___dlopen 0 0% 76.17% 9ms 2.00% _dl_open 0 0% 76.17% 9ms 2.00% dl_open_worker 0 0% 76.17% 9ms 2.00% dlopen_doit 0 0% 76.17% 9ms 2.00% dlopen_implementation (inline) 1ms 0.22% 76.39% 8ms 1.78% VecAYPX 0 0% 76.39% 8ms 1.78% _dl_init 0 0% 76.39% 8ms 1.78% _dl_lookup_symbol_x 1ms 0.22% 76.61% 8ms 1.78% _dl_runtime_resolve_xsavec 0 0% 76.61% 8ms 1.78% call_init (inline) 0 0% 76.61% 8ms 1.78% dl_open_worker_begin 0 0% 76.61% 8ms 1.78% mca_base_component_find 0 0% 76.61% 8ms 1.78% mca_base_component_repository_open 7ms 1.56% 78.17% 7ms 1.56% VecAYPX_Seq 1ms 0.22% 78.40% 7ms 1.56% _dl_fixup 0 0% 78.40% 7ms 1.56% _dl_start_user 2ms 0.45% 78.84% 6ms 1.34% VecSetType 6ms 1.34% 80.18% 6ms 1.34% __GI___libc_read 6ms 1.34% 81.51% 6ms 1.34% do_lookup_x 0 0% 81.51% 6ms 1.34% mca_base_component_repository_release 0 0% 81.51% 6ms 1.34% opal_hwloc_base_get_topology 0 0% 81.51% 6ms 1.34% orte_ess_base_proc_binding 0 0% 81.51% 5ms 1.11% PetscMemcpy (inline) 0 0% 81.51% 5ms 1.11% VecAXPY 0 0% 81.51% 5ms 1.11% VecAXPY_Seq 1ms 0.22% 81.74% 5ms 1.11% VecCreate 0 0% 81.74% 5ms 1.11% __dlclose 4ms 0.89% 82.63% 5ms 1.11% __ieee754_exp_fma 0 0% 82.63% 5ms 1.11% _dl_close 1ms 0.22% 82.85% 5ms 1.11% _dl_close_worker (inline) 5ms 1.11% 83.96% 5ms 1.11% daxpy_ 0 0% 83.96% 4ms 0.89% AbstractCardiacProblem::Initialise 1ms 0.22% 84.19% 4ms 0.89% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.19% 4ms 0.89% VecCreate_Seq 1ms 0.22% 84.41% 4ms 0.89% __cxa_finalize 4ms 0.89% 85.30% 4ms 0.89% __memcpy_avx_unaligned_erms 0 0% 85.30% 4ms 0.89% _dl_call_fini 0 0% 85.30% 4ms 0.89% _dl_map_object 0 0% 85.30% 4ms 0.89% _dl_open_relocate_one_object (inline) 1ms 0.22% 85.52% 4ms 0.89% _dl_relocate_object 0 0% 85.52% 4ms 0.89% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.22% 85.75% 4ms 0.89% boost::serialization::singleton::get_instance 0 0% 85.75% 3ms 0.67% CxxTest::RealWorldDescription::tearDown 0 0% 85.75% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.75% 3ms 0.67% KSPConvergedDefault 0 0% 85.75% 3ms 0.67% PetscFinalize 0 0% 85.75% 3ms 0.67% PetscSetup::tearDownWorld 0 0% 85.75% 3ms 0.67% PetscSetupUtils::CommonFinalize 0 0% 85.75% 3ms 0.67% VecCopy 0 0% 85.75% 3ms 0.67% VecCopy_Seq (partial-inline) 2ms 0.45% 86.19% 3ms 0.67% VecCreate_Seq_Private (partial-inline) 0 0% 86.19% 3ms 0.67% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 86.19% 3ms 0.67% __GI_exit 0 0% 86.19% 3ms 0.67% __run_exit_handlers 0 0% 86.19% 3ms 0.67% _dl_fini 0 0% 86.19% 3ms 0.67% _dl_map_object_deps 0 0% 86.19% 3ms 0.67% _dl_map_object_from_fd 0 0% 86.19% 3ms 0.67% mca_base_components_close 0 0% 86.19% 3ms 0.67% mca_base_framework_components_open 0 0% 86.19% 3ms 0.67% mca_topo_base_dist_graph_neighbors_count 0 0% 86.19% 3ms 0.67% ompi_mpi_finalize 0 0% 86.19% 3ms 0.67% openaux 3ms 0.67% 86.86% 3ms 0.67% std::_Rb_tree_increment