File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 391ms, 88.46% of 442ms total Dropped 183 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 433ms 97.96% __libc_start_call_main 0 0% 0% 433ms 97.96% __libc_start_main_impl 0 0% 0% 433ms 97.96% _start 0 0% 0% 430ms 97.29% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 430ms 97.29% CxxTest::TestRunner::runAllTests 0 0% 0% 430ms 97.29% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 430ms 97.29% main 0 0% 0% 398ms 90.05% CxxTest::RealTestDescription::run 0 0% 0% 398ms 90.05% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 398ms 90.05% CxxTest::TestRunner::runTest (inline) 0 0% 0% 398ms 90.05% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 398ms 90.05% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 394ms 89.14% AbstractCardiacProblem::Solve 0 0% 0% 392ms 88.69% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 355ms 80.32% KSPSolve 0 0% 0% 355ms 80.32% KSPSolve_Private 0 0% 0% 355ms 80.32% LinearSystem::Solve 0 0% 0% 353ms 79.86% KSPSolve_CG 0 0% 0% 213ms 48.19% KSP_PCApply.lto_priv.7 0 0% 0% 201ms 45.48% PCApply 0 0% 0% 201ms 45.48% PCApply_BJacobi_Singleblock 0 0% 0% 170ms 38.46% KSPSolve_PREONLY (partial-inline) 0 0% 0% 163ms 36.88% MatSolve 162ms 36.65% 36.65% 163ms 36.88% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.65% 163ms 36.88% PCApply_ICC 0 0% 36.65% 75ms 16.97% MatMult 5ms 1.13% 37.78% 75ms 16.97% MatMult_SeqAIJ (partial-inline) 70ms 15.84% 53.62% 75ms 16.97% MatMult_SeqAIJ_Inode (inline) 51ms 11.54% 65.16% 51ms 11.54% ddot_ 0 0% 65.16% 40ms 9.05% VecTDot 0 0% 65.16% 40ms 9.05% VecTDot_Seq 1ms 0.23% 65.38% 40ms 9.05% VecXDot_Seq_Private.constprop.0 0 0% 65.38% 32ms 7.24% AbstractCardiacTissue::SolveCellSystems 0 0% 65.38% 30ms 6.79% MatNullSpaceRemove 0 0% 65.38% 29ms 6.56% CxxTest::RealWorldDescription::setUp 0 0% 65.38% 29ms 6.56% PetscInitialize 0 0% 65.38% 29ms 6.56% PetscSetup::setUpWorld 0 0% 65.38% 29ms 6.56% PetscSetupUtils::CommonSetup 0 0% 65.38% 29ms 6.56% PetscSetupUtils::InitialisePetsc 0 0% 65.38% 28ms 6.33% PMPI_Init_thread 0 0% 65.38% 28ms 6.33% ompi_mpi_init 2ms 0.45% 65.84% 24ms 5.43% 0 0% 65.84% 21ms 4.75% orte_init 0 0% 65.84% 20ms 4.52% VecMDot 1ms 0.23% 66.06% 20ms 4.52% VecMXDot_Private 19ms 4.30% 70.36% 19ms 4.30% VecMDot_Seq 1ms 0.23% 70.59% 16ms 3.62% AbstractCardiacTissue::UpdateCaches (inline) 8ms 1.81% 72.40% 15ms 3.39% CellLuoRudy1991FromCellML::GetIIonic 0 0% 72.40% 14ms 3.17% VecDuplicate 0 0% 72.40% 13ms 2.94% VecDuplicate_Seq 0 0% 72.40% 13ms 2.94% VecNorm 0 0% 72.40% 13ms 2.94% VecNorm_Seq 2ms 0.45% 72.85% 12ms 2.71% AbstractCardiacCell::ComputeExceptVoltage 0 0% 72.85% 12ms 2.71% hwloc_topology_load 0 0% 72.85% 11ms 2.49% __GI__dl_catch_exception 0 0% 72.85% 11ms 2.49% _dl_catch_error 0 0% 72.85% 11ms 2.49% _dlerror_run 0 0% 72.85% 11ms 2.49% hwloc_linux_get_tid_last_cpu_location 1ms 0.23% 73.08% 10ms 2.26% VecMAXPY 0 0% 73.08% 10ms 2.26% VecSetType 4ms 0.9% 73.98% 10ms 2.26% __GI___exp 0 0% 73.98% 10ms 2.26% mca_base_framework_open 0 0% 73.98% 10ms 2.26% opal_stackframe_output 0 0% 73.98% 9ms 2.04% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.23% 74.21% 9ms 2.04% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 74.21% 9ms 2.04% EulerIvpOdeSolver::CalculateNextYValue 0 0% 74.21% 9ms 2.04% KSP_PCApply (partial-inline) 1ms 0.23% 74.43% 9ms 2.04% PetscMallocA 9ms 2.04% 76.47% 9ms 2.04% VecMAXPY_Seq 0 0% 76.47% 9ms 2.04% mca_base_framework_components_register 0 0% 76.47% 9ms 2.04% mca_base_framework_register 0 0% 76.47% 8ms 1.81% PetscMallocAlign (partial-inline) 0 0% 76.47% 8ms 1.81% ___dlopen 0 0% 76.47% 8ms 1.81% _dl_open 0 0% 76.47% 8ms 1.81% dl_open_worker 0 0% 76.47% 8ms 1.81% dl_open_worker_begin 0 0% 76.47% 8ms 1.81% dlopen_doit 0 0% 76.47% 8ms 1.81% dlopen_implementation (inline) 0 0% 76.47% 7ms 1.58% VecCreate_Seq 0 0% 76.47% 7ms 1.58% _dl_init 0 0% 76.47% 7ms 1.58% _dl_start_user 0 0% 76.47% 7ms 1.58% call_init (inline) 0 0% 76.47% 7ms 1.58% mca_base_component_find 0 0% 76.47% 7ms 1.58% mca_base_component_repository_open 1ms 0.23% 76.70% 6ms 1.36% VecDestroy 4ms 0.9% 77.60% 6ms 1.36% __ieee754_exp_fma 2ms 0.45% 78.05% 6ms 1.36% boost::serialization::singleton::get_instance 0 0% 78.05% 5ms 1.13% VecAYPX 5ms 1.13% 79.19% 5ms 1.13% VecAYPX_Seq 5ms 1.13% 80.32% 5ms 1.13% __GI___libc_read 0 0% 80.32% 5ms 1.13% _dl_lookup_symbol_x 5ms 1.13% 81.45% 5ms 1.13% _int_malloc 0 0% 81.45% 5ms 1.13% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 4ms 0.9% 82.35% 5ms 1.13% do_lookup_x 0 0% 82.35% 4ms 0.9% AbstractCardiacProblem::Initialise 0 0% 82.35% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 82.35% 4ms 0.9% PetscMemzero (inline) 0 0% 82.35% 4ms 0.9% VecAXPY 0 0% 82.35% 4ms 0.9% VecAXPY_Seq 0 0% 82.35% 4ms 0.9% VecCreate 1ms 0.23% 82.58% 4ms 0.9% __cxa_finalize 2ms 0.45% 83.03% 4ms 0.9% __ieee754_pow_fma 4ms 0.9% 83.94% 4ms 0.9% __memset_avx2_unaligned_erms 0 0% 83.94% 4ms 0.9% __pow 4ms 0.9% 84.84% 4ms 0.9% __strcmp_avx2 0 0% 84.84% 4ms 0.9% _dl_call_fini 0 0% 84.84% 4ms 0.9% _dl_map_object 4ms 0.9% 85.75% 4ms 0.9% daxpy_ 0 0% 85.75% 4ms 0.9% opal_hwloc_base_get_topology 0 0% 85.75% 4ms 0.9% orte_ess_base_proc_binding 0 0% 85.75% 4ms 0.9% std::pow (inline) 0 0% 85.75% 3ms 0.68% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.68% 86.43% 3ms 0.68% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 86.43% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 86.43% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 86.43% 3ms 0.68% KSPConvergedDefault 0 0% 86.43% 3ms 0.68% KSPSetUp 0 0% 86.43% 3ms 0.68% PetscFinalize 0 0% 86.43% 3ms 0.68% PetscHeaderDestroy_Private 0 0% 86.43% 3ms 0.68% PetscMemcpy (inline) 0 0% 86.43% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 86.43% 3ms 0.68% PetscSetupUtils::CommonFinalize 0 0% 86.43% 3ms 0.68% XOpenDisplay 0 0% 86.43% 3ms 0.68% [hwloc_gl.so] 0 0% 86.43% 3ms 0.68% _XConnectXCB 3ms 0.68% 87.10% 3ms 0.68% __GI___close 1ms 0.23% 87.33% 3ms 0.68% __GI___libc_malloc 0 0% 87.33% 3ms 0.68% __GI_exit 0 0% 87.33% 3ms 0.68% __dlclose 3ms 0.68% 88.01% 3ms 0.68% __memcpy_avx_unaligned_erms 0 0% 88.01% 3ms 0.68% __posix_memalign 0 0% 88.01% 3ms 0.68% __run_exit_handlers 0 0% 88.01% 3ms 0.68% _dl_close 0 0% 88.01% 3ms 0.68% _dl_close_worker (inline) 0 0% 88.01% 3ms 0.68% _dl_fini 0 0% 88.01% 3ms 0.68% _dl_open_relocate_one_object (inline) 0 0% 88.01% 3ms 0.68% _dl_relocate_object 1ms 0.23% 88.24% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.23% 88.46% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.46% 3ms 0.68% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 88.46% 3ms 0.68% elf_dynamic_do_Rela (inline) 0 0% 88.46% 3ms 0.68% elf_machine_rela (inline) 0 0% 88.46% 3ms 0.68% mca_base_component_repository_release 0 0% 88.46% 3ms 0.68% mca_base_components_close 0 0% 88.46% 3ms 0.68% ompi_mpi_finalize 0 0% 88.46% 3ms 0.68% resolve_map (inline) 0 0% 88.46% 3ms 0.68% xcb_connect_to_display_with_auth_info