File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12747ms, 85.91% of 14838ms total Dropped 757 nodes (cum <= 74.19ms) flat flat% sum% cum cum% 0 0% 0% 14830ms 99.95% __libc_start_call_main 0 0% 0% 14830ms 99.95% __libc_start_main_impl 0 0% 0% 14830ms 99.95% _start 0 0% 0% 14827ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14827ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14827ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14827ms 99.93% main 0 0% 0% 14791ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14791ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14791ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14770ms 99.54% AbstractCardiacProblem::Solve 5ms 0.034% 0.04% 11439ms 77.09% AbstractDynamicLinearPdeSolver::Solve 33ms 0.22% 0.26% 9179ms 61.86% AbstractCardiacTissue::SolveCellSystems 141ms 0.95% 1.21% 5655ms 38.11% AbstractCardiacCell::ComputeExceptVoltage 169ms 1.14% 2.35% 4882ms 32.90% AbstractOneStepIvpOdeSolver::InternalSolve 177ms 1.19% 3.54% 4171ms 28.11% EulerIvpOdeSolver::CalculateNextYValue 1010ms 6.81% 10.35% 3943ms 26.57% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1771ms 11.94% 22.29% 3567ms 24.04% __GI___exp 1ms 0.0067% 22.29% 3261ms 21.98% MonodomainProblem::WriteOneStep 2ms 0.013% 22.31% 3115ms 20.99% Hdf5DataWriter::PutVector 4ms 0.027% 22.33% 3096ms 20.87% H5Dwrite 6ms 0.04% 22.37% 3079ms 20.75% H5D__write 96ms 0.65% 23.02% 2706ms 18.24% AbstractCardiacTissue::UpdateCaches (inline) 791ms 5.33% 28.35% 2554ms 17.21% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 28.36% 1831ms 12.34% H5D__chunk_collective_write 17ms 0.11% 28.47% 1830ms 12.33% H5F_set_coll_metadata_reads 1593ms 10.74% 39.21% 1724ms 11.62% __ieee754_exp_fma 15ms 0.1% 39.31% 1594ms 10.74% H5FD_s3comms_uriencode 0 0% 39.31% 1531ms 10.32% LinearSystem::Solve 0 0% 39.31% 1405ms 9.47% KSPSolve 2ms 0.013% 39.32% 1405ms 9.47% KSPSolve_Private 4ms 0.027% 39.35% 1391ms 9.37% KSPSolve_CG 3ms 0.02% 39.37% 1225ms 8.26% H5F_block_write 4ms 0.027% 39.40% 1222ms 8.24% H5PB_write 42ms 0.28% 39.68% 1219ms 8.22% 3ms 0.02% 39.70% 1218ms 8.21% H5F__accum_write 1ms 0.0067% 39.71% 1215ms 8.19% H5FD_write 7ms 0.047% 39.76% 1142ms 7.70% H5D__chunk_cacheable 1ms 0.0067% 39.76% 1131ms 7.62% H5D__mpio_select_write 2ms 0.013% 39.78% 1036ms 6.98% PMPI_File_write_at_all 1013ms 6.83% 46.60% 1016ms 6.85% __GI_pwritev64 394ms 2.66% 49.26% 993ms 6.69% H5S_select_iterate 6ms 0.04% 49.30% 926ms 6.24% std::pow (inline) 83ms 0.56% 49.86% 920ms 6.20% __pow 111ms 0.75% 50.61% 837ms 5.64% __ieee754_pow_fma 0 0% 50.61% 756ms 5.10% PCApply 1ms 0.0067% 50.61% 753ms 5.07% PCApply_BJacobi_Singleblock 1ms 0.0067% 50.62% 716ms 4.83% KSPSolve_PREONLY 1ms 0.0067% 50.63% 711ms 4.79% PCApply_ICC 3ms 0.02% 50.65% 710ms 4.79% MatSolve 299ms 2.02% 52.66% 709ms 4.78% MonodomainSolver::SetupLinearSystem 698ms 4.70% 57.37% 707ms 4.76% MatSolve_SeqSBAIJ_1_NaturalOrdering 290ms 1.95% 59.32% 651ms 4.39% CellLuoRudy1991FromCellML::VerifyStateVariables 5ms 0.034% 59.35% 625ms 4.21% MatMult 619ms 4.17% 63.53% 620ms 4.18% MatMult_SeqAIJ 57ms 0.38% 63.91% 608ms 4.10% H5D__chunk_set_sizes 0 0% 63.91% 558ms 3.76% KSP_PCApply.lto_priv.7 55ms 0.37% 64.28% 467ms 3.15% H5S_mpio_space_type 394ms 2.66% 66.94% 394ms 2.66% log_inline (inline) 289ms 1.95% 68.88% 291ms 1.96% exp_inline (inline) 3ms 0.02% 68.90% 265ms 1.79% KSPConvergedDefault 107ms 0.72% 69.63% 244ms 1.64% TimeStepper::TimeStepper 45ms 0.3% 69.93% 225ms 1.52% __GI___libc_malloc 173ms 1.17% 71.09% 211ms 1.42% _int_malloc 0 0% 71.09% 200ms 1.35% KSP_PCApply 135ms 0.91% 72.00% 174ms 1.17% AbstractOneStepIvpOdeSolver::Solve 10ms 0.067% 72.07% 174ms 1.17% MPI_Type_free 11ms 0.074% 72.15% 173ms 1.17% ompi_datatype_destroy 102ms 0.69% 72.83% 173ms 1.17% top12 (inline) 19ms 0.13% 72.96% 172ms 1.16% H5VM_chunk_index 92ms 0.62% 73.58% 170ms 1.15% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 168ms 1.13% 74.71% 168ms 1.13% std::isinf (inline) 165ms 1.11% 75.83% 165ms 1.11% [libchaste_heart.so] 39ms 0.26% 76.09% 160ms 1.08% AbstractCardiacCell::SetVoltage (partial-inline) 7ms 0.047% 76.14% 155ms 1.04% ompi_datatype_create 29ms 0.2% 76.33% 154ms 1.04% __GI___libc_free 23ms 0.16% 76.49% 152ms 1.02% H5S_set_version 4ms 0.027% 76.51% 149ms 1.00% ompi_info_register_framework_params 148ms 1% 77.51% 148ms 1% TimeStepper::CalculateNextTime 49ms 0.33% 77.84% 148ms 1% ompi_datatype_release_args 122ms 0.82% 78.66% 144ms 0.97% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 3ms 0.02% 78.68% 144ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 134ms 0.9% 79.59% 134ms 0.9% ddot_ 132ms 0.89% 80.48% 132ms 0.89% __memcpy_avx_unaligned_erms 53ms 0.36% 80.83% 129ms 0.87% H5VM_array_calc 50ms 0.34% 81.17% 125ms 0.84% _int_free 64ms 0.43% 81.60% 121ms 0.82% H5S_hyper_add_span_element 46ms 0.31% 81.91% 111ms 0.75% std::__cxx11::basic_string::basic_string 4ms 0.027% 81.94% 108ms 0.73% PMPI_Type_create_resized 1ms 0.0067% 81.95% 106ms 0.71% PMPI_File_set_view 4ms 0.027% 81.97% 102ms 0.69% VecNorm 98ms 0.66% 82.63% 98ms 0.66% __ieee754_log_fma 80ms 0.54% 83.17% 97ms 0.65% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 83.18% 96ms 0.65% VecDuplicate 89ms 0.6% 83.78% 95ms 0.64% AbstractParameterisedSystem::SetAnyVariable 2ms 0.013% 83.79% 95ms 0.64% VecDuplicate_MPI 1ms 0.0067% 83.80% 95ms 0.64% ompi_datatype_duplicate 25ms 0.17% 83.97% 91ms 0.61% ompi_datatype_set_args 1ms 0.0067% 83.97% 84ms 0.57% VecNorm_Seq 81ms 0.55% 84.52% 81ms 0.55% std::vector::operator[] (inline) 45ms 0.3% 84.82% 79ms 0.53% TimeStepper::AdvanceOneTimeStep 0 0% 84.82% 79ms 0.53% VecTDot 7ms 0.047% 84.87% 79ms 0.53% std::vector::_M_assign_aux (inline) 0 0% 84.87% 79ms 0.53% std::vector::assign (inline) 0 0% 84.87% 78ms 0.53% VecTDot_Seq 0 0% 84.87% 78ms 0.53% VecXDot_Seq_Private.constprop.0 77ms 0.52% 85.39% 77ms 0.52% H5VM_array_offset_pre 77ms 0.52% 85.91% 77ms 0.52% H5VM_chunk_index_scaled