File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 288ms, 89.16% of 323ms total Dropped 149 nodes (cum <= 1.61ms) flat flat% sum% cum cum% 0 0% 0% 316ms 97.83% __libc_start_call_main 0 0% 0% 316ms 97.83% __libc_start_main_impl 0 0% 0% 316ms 97.83% _start 0 0% 0% 314ms 97.21% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 314ms 97.21% CxxTest::TestRunner::runAllTests 0 0% 0% 314ms 97.21% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 314ms 97.21% main 0 0% 0% 283ms 87.62% CxxTest::RealTestDescription::run 0 0% 0% 283ms 87.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 283ms 87.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 283ms 87.62% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 283ms 87.62% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 280ms 86.69% AbstractCardiacProblem::Solve 0 0% 0% 280ms 86.69% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 243ms 75.23% KSPSolve 0 0% 0% 243ms 75.23% KSPSolve_Private 0 0% 0% 243ms 75.23% LinearSystem::Solve 1ms 0.31% 0.31% 242ms 74.92% KSPSolve_CG 0 0% 0.31% 148ms 45.82% KSP_PCApply.lto_priv.7 0 0% 0.31% 141ms 43.65% PCApply 0 0% 0.31% 141ms 43.65% PCApply_BJacobi_Singleblock 0 0% 0.31% 112ms 34.67% KSPSolve_PREONLY (partial-inline) 0 0% 0.31% 103ms 31.89% MatSolve 103ms 31.89% 32.20% 103ms 31.89% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 32.20% 103ms 31.89% PCApply_ICC 0 0% 32.20% 51ms 15.79% MatMult 1ms 0.31% 32.51% 51ms 15.79% MatMult_SeqAIJ (partial-inline) 49ms 15.17% 47.68% 51ms 15.79% MatMult_SeqAIJ_Inode (inline) 0 0% 47.68% 34ms 10.53% MatNullSpaceRemove 0 0% 47.68% 32ms 9.91% AbstractCardiacTissue::SolveCellSystems 0 0% 47.68% 29ms 8.98% CxxTest::RealWorldDescription::setUp 0 0% 47.68% 29ms 8.98% PetscSetup::setUpWorld 0 0% 47.68% 29ms 8.98% PetscSetupUtils::CommonSetup 0 0% 47.68% 28ms 8.67% PMPI_Init_thread 0 0% 47.68% 28ms 8.67% PetscInitialize 0 0% 47.68% 28ms 8.67% PetscSetupUtils::InitialisePetsc 28ms 8.67% 56.35% 28ms 8.67% ddot_ 0 0% 56.35% 28ms 8.67% ompi_mpi_init 0 0% 56.35% 26ms 8.05% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.31% 56.66% 24ms 7.43% 0 0% 56.66% 22ms 6.81% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 56.66% 19ms 5.88% VecMDot 1ms 0.31% 56.97% 19ms 5.88% VecMXDot_Private 0 0% 56.97% 19ms 5.88% VecTDot 0 0% 56.97% 19ms 5.88% VecTDot_Seq 0 0% 56.97% 19ms 5.88% VecXDot_Seq_Private.constprop.0 18ms 5.57% 62.54% 18ms 5.57% VecMDot_Seq 1ms 0.31% 62.85% 17ms 5.26% EulerIvpOdeSolver::CalculateNextYValue 0 0% 62.85% 17ms 5.26% orte_init 5ms 1.55% 64.40% 16ms 4.95% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 64.40% 15ms 4.64% VecMAXPY 15ms 4.64% 69.04% 15ms 4.64% VecMAXPY_Seq 0 0% 69.04% 13ms 4.02% __GI__dl_catch_exception 0 0% 69.04% 13ms 4.02% _dl_catch_error 0 0% 69.04% 13ms 4.02% _dlerror_run 0 0% 69.04% 13ms 4.02% mca_base_framework_open 0 0% 69.04% 12ms 3.72% KSP_PCApply (partial-inline) 0 0% 69.04% 12ms 3.72% hwloc_topology_load 0 0% 69.04% 12ms 3.72% mca_base_framework_register 0 0% 69.04% 12ms 3.72% opal_stackframe_output 0 0% 69.04% 11ms 3.41% ___dlopen 0 0% 69.04% 11ms 3.41% _dl_init 0 0% 69.04% 11ms 3.41% _dl_open 0 0% 69.04% 11ms 3.41% call_init (inline) 0 0% 69.04% 11ms 3.41% dl_open_worker 0 0% 69.04% 11ms 3.41% dlopen_doit 0 0% 69.04% 11ms 3.41% dlopen_implementation (inline) 0 0% 69.04% 11ms 3.41% hwloc_linux_get_tid_last_cpu_location 0 0% 69.04% 11ms 3.41% mca_base_framework_components_register 0 0% 69.04% 10ms 3.10% VecDuplicate 0 0% 69.04% 10ms 3.10% VecDuplicate_Seq 0 0% 69.04% 10ms 3.10% mca_base_component_find 0 0% 69.04% 10ms 3.10% mca_base_component_repository_open 0 0% 69.04% 9ms 2.79% VecNorm 0 0% 69.04% 9ms 2.79% VecNorm_Seq 3ms 0.93% 69.97% 9ms 2.79% __GI___exp 0 0% 69.97% 7ms 2.17% mca_base_framework_components_open 0 0% 69.97% 7ms 2.17% mca_topo_base_dist_graph_neighbors_count 1ms 0.31% 70.28% 6ms 1.86% VecAXPY 0 0% 70.28% 6ms 1.86% VecAYPX 6ms 1.86% 72.14% 6ms 1.86% VecAYPX_Seq 0 0% 72.14% 6ms 1.86% VecSetType 0 0% 72.14% 6ms 1.86% _dl_start_user 0 0% 72.14% 6ms 1.86% dl_open_worker_begin 0 0% 72.14% 5ms 1.55% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.62% 72.76% 5ms 1.55% CellLuoRudy1991FromCellML::GetIIonic 0 0% 72.76% 5ms 1.55% VecAXPY_Seq 0 0% 72.76% 5ms 1.55% VecCreate_Seq 5ms 1.55% 74.30% 5ms 1.55% [libchaste_heart.so] 5ms 1.55% 75.85% 5ms 1.55% __GI___libc_read 5ms 1.55% 77.40% 5ms 1.55% __ieee754_exp_fma 5ms 1.55% 78.95% 5ms 1.55% __memset_avx512_unaligned_erms 0 0% 78.95% 5ms 1.55% _dl_map_object 5ms 1.55% 80.50% 5ms 1.55% daxpy_ 0 0% 80.50% 5ms 1.55% opal_hwloc_base_get_topology 0 0% 80.50% 5ms 1.55% orte_ess_base_proc_binding 1ms 0.31% 80.80% 4ms 1.24% BidomainSolver::SetupLinearSystem 0 0% 80.80% 4ms 1.24% PetscMallocA 0 0% 80.80% 4ms 1.24% PetscMallocAlign (partial-inline) 0 0% 80.80% 4ms 1.24% PetscMemzero (inline) 1ms 0.31% 81.11% 4ms 1.24% VecCreate 4ms 1.24% 82.35% 4ms 1.24% __GI___clock_nanosleep 0 0% 82.35% 4ms 1.24% __GI___nanosleep 0 0% 82.35% 4ms 1.24% usleep 0 0% 82.35% 3ms 0.93% AbstractCardiacProblem::Initialise 0 0% 82.35% 3ms 0.93% KSPConvergedDefault 0 0% 82.35% 3ms 0.93% PetscHeaderCreate_Private 3ms 0.93% 83.28% 3ms 0.93% __GI___open64_nocancel 3ms 0.93% 84.21% 3ms 0.93% __strcmp_evex 0 0% 84.21% 3ms 0.93% _dl_map_object_deps 0 0% 84.21% 3ms 0.93% boost::serialization::singleton::get_instance 0 0% 84.21% 3ms 0.93% openaux 0 0% 84.21% 2ms 0.62% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 84.21% 2ms 0.62% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.21% 2ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 84.21% 2ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.21% 2ms 0.62% PMPI_Comm_get_attr 1ms 0.31% 84.52% 2ms 0.62% PetscCommDuplicate 0 0% 84.52% 2ms 0.62% PetscFinalize 0 0% 84.52% 2ms 0.62% PetscHeaderDestroy_Private 0 0% 84.52% 2ms 0.62% PetscSetup::tearDownWorld 0 0% 84.52% 2ms 0.62% PetscSetupUtils::CommonFinalize 1ms 0.31% 84.83% 2ms 0.62% TimeStepper::AdvanceOneTimeStep 1ms 0.31% 85.14% 2ms 0.62% TimeStepper::TimeStepper 0 0% 85.14% 2ms 0.62% TrianglesMeshReader::GetNextItemFromStream 1ms 0.31% 85.45% 2ms 0.62% VecCreate_Seq_Private 0 0% 85.45% 2ms 0.62% VecDestroy 0 0% 85.45% 2ms 0.62% XOpenDisplay 0 0% 85.45% 2ms 0.62% [hwloc_gl.so] 2ms 0.62% 86.07% 2ms 0.62% [libchaste_global.so] 0 0% 86.07% 2ms 0.62% [libxcb.so.1.1.0] 0 0% 86.07% 2ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 86.07% 2ms 0.62% _XConnectXCB 0 0% 86.07% 2ms 0.62% __GI_exit 2ms 0.62% 86.69% 2ms 0.62% __GI_munmap 0 0% 86.69% 2ms 0.62% __cxa_finalize 0 0% 86.69% 2ms 0.62% __dlclose 2ms 0.62% 87.31% 2ms 0.62% __libc_connect 2ms 0.62% 87.93% 2ms 0.62% __libc_openat64 2ms 0.62% 88.54% 2ms 0.62% __memcpy_avx512_unaligned_erms 0 0% 88.54% 2ms 0.62% __run_exit_handlers 0 0% 88.54% 2ms 0.62% _dl_call_fini 0 0% 88.54% 2ms 0.62% _dl_close 0 0% 88.54% 2ms 0.62% _dl_close_worker (inline) 0 0% 88.54% 2ms 0.62% _dl_fini 0 0% 88.54% 2ms 0.62% _dl_lookup_symbol_x 0 0% 88.54% 2ms 0.62% _dl_map_object_from_fd 0 0% 88.54% 2ms 0.62% _dl_unmap 0 0% 88.54% 2ms 0.62% _dl_unmap_segments (inline) 0 0% 88.54% 2ms 0.62% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 88.54% 2ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.54% 2ms 0.62% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 88.54% 2ms 0.62% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.54% 2ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 88.54% 2ms 0.62% mca_base_component_repository_release 0 0% 88.54% 2ms 0.62% mca_base_components_close 0 0% 88.54% 2ms 0.62% mca_base_framework_close 0 0% 88.54% 2ms 0.62% mca_base_var_group_register 0 0% 88.54% 2ms 0.62% mca_base_var_register 0 0% 88.54% 2ms 0.62% ompi_attr_get_c 0 0% 88.54% 2ms 0.62% ompi_mpi_finalize 2ms 0.62% 89.16% 2ms 0.62% strcmp 0 0% 89.16% 2ms 0.62% xcb_connect_to_display_with_auth_info