File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 10520ms, 88.46% of 11892ms total Dropped 661 nodes (cum <= 59.46ms) flat flat% sum% cum cum% 0 0% 0% 11885ms 99.94% __libc_start_call_main 0 0% 0% 11885ms 99.94% __libc_start_main_impl 0 0% 0% 11885ms 99.94% _start 0 0% 0% 11882ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11882ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11882ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11882ms 99.92% main 0 0% 0% 11852ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11852ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11852ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0084% 0.0084% 11835ms 99.52% AbstractCardiacProblem::Solve 2ms 0.017% 0.025% 8932ms 75.11% AbstractDynamicLinearPdeSolver::Solve 71ms 0.6% 0.62% 7237ms 60.86% AbstractCardiacTissue::SolveCellSystems 48ms 0.4% 1.03% 4520ms 38.01% AbstractCardiacCell::ComputeExceptVoltage 95ms 0.8% 1.82% 4111ms 34.57% AbstractOneStepIvpOdeSolver::InternalSolve 115ms 0.97% 2.79% 3498ms 29.41% EulerIvpOdeSolver::CalculateNextYValue 905ms 7.61% 10.40% 3360ms 28.25% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.40% 2850ms 23.97% MonodomainProblem::WriteOneStep 0 0% 10.40% 2786ms 23.43% Hdf5DataWriter::PutVector 0 0% 10.40% 2759ms 23.20% H5Dwrite 0 0% 10.40% 2746ms 23.09% H5D__write 979ms 8.23% 18.63% 2635ms 22.16% __GI___exp 78ms 0.66% 19.29% 1983ms 16.68% AbstractCardiacTissue::UpdateCaches (inline) 513ms 4.31% 23.60% 1854ms 15.59% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0084% 23.61% 1562ms 13.13% H5D__chunk_collective_write 11ms 0.092% 23.71% 1561ms 13.13% H5F_set_coll_metadata_reads 1390ms 11.69% 35.39% 1429ms 12.02% __ieee754_exp_fma 11ms 0.092% 35.49% 1310ms 11.02% H5FD_s3comms_uriencode 8ms 0.067% 35.55% 1146ms 9.64% H5D__chunk_cacheable 322ms 2.71% 38.26% 1026ms 8.63% H5S_select_iterate 14ms 0.12% 38.38% 1002ms 8.43% 1ms 0.0084% 38.39% 997ms 8.38% LinearSystem::Solve 1ms 0.0084% 38.40% 986ms 8.29% H5F__accum_write 0 0% 38.40% 986ms 8.29% H5F_block_write 0 0% 38.40% 986ms 8.29% H5PB_write 0 0% 38.40% 985ms 8.28% H5FD_write 1ms 0.0084% 38.40% 947ms 7.96% H5D__mpio_select_write 1ms 0.0084% 38.41% 934ms 7.85% KSPSolve 4ms 0.034% 38.45% 934ms 7.85% KSPSolve_Private 0 0% 38.45% 929ms 7.81% KSPSolve_CG 0 0% 38.45% 893ms 7.51% PMPI_File_write_at_all 867ms 7.29% 45.74% 878ms 7.38% __GI_pwritev64 19ms 0.16% 45.90% 770ms 6.47% std::pow (inline) 42ms 0.35% 46.25% 743ms 6.25% __pow 75ms 0.63% 46.88% 714ms 6.00% H5D__chunk_set_sizes 42ms 0.35% 47.23% 696ms 5.85% __ieee754_pow_fma 218ms 1.83% 49.07% 683ms 5.74% MonodomainSolver::SetupLinearSystem 362ms 3.04% 52.11% 550ms 4.62% CellLuoRudy1991FromCellML::VerifyStateVariables 514ms 4.32% 56.43% 514ms 4.32% [libchaste_heart.so] 2ms 0.017% 56.45% 507ms 4.26% MatMult 504ms 4.24% 60.69% 505ms 4.25% MatMult_SeqAIJ 1ms 0.0084% 60.70% 494ms 4.15% PCApply 1ms 0.0084% 60.70% 492ms 4.14% PCApply_BJacobi_Singleblock 1ms 0.0084% 60.71% 474ms 3.99% KSPSolve_PREONLY 2ms 0.017% 60.73% 471ms 3.96% MatSolve 0 0% 60.73% 471ms 3.96% PCApply_ICC 467ms 3.93% 64.66% 469ms 3.94% MatSolve_SeqSBAIJ_1_NaturalOrdering 54ms 0.45% 65.11% 399ms 3.36% H5S_mpio_space_type 307ms 2.58% 67.69% 350ms 2.94% exp_inline (inline) 0 0% 67.69% 327ms 2.75% KSP_PCApply.lto_priv.7 24ms 0.2% 67.89% 303ms 2.55% H5VM_chunk_index 295ms 2.48% 70.38% 295ms 2.48% log_inline (inline) 113ms 0.95% 71.33% 279ms 2.35% TimeStepper::TimeStepper 245ms 2.06% 73.39% 245ms 2.06% [libm.so.6] 237ms 1.99% 75.38% 237ms 1.99% H5VM_chunk_index_scaled 3ms 0.025% 75.40% 201ms 1.69% KSPConvergedDefault 17ms 0.14% 75.55% 188ms 1.58% ompi_datatype_destroy 89ms 0.75% 76.29% 187ms 1.57% __GI___libc_malloc 3ms 0.025% 76.32% 183ms 1.54% MPI_Type_free 0 0% 76.32% 168ms 1.41% KSP_PCApply 48ms 0.4% 76.72% 160ms 1.35% ompi_datatype_release_args 3ms 0.025% 76.75% 160ms 1.35% ompi_info_register_framework_params 159ms 1.34% 78.09% 159ms 1.34% TimeStepper::CalculateNextTime 7ms 0.059% 78.14% 158ms 1.33% ompi_datatype_create 13ms 0.11% 78.25% 152ms 1.28% __GI___libc_free 95ms 0.8% 79.05% 139ms 1.17% _int_free 17ms 0.14% 79.20% 117ms 0.98% H5S_set_version 95ms 0.8% 79.99% 117ms 0.98% _int_malloc 57ms 0.48% 80.47% 111ms 0.93% H5S_hyper_add_span_element 104ms 0.87% 81.35% 104ms 0.87% [libchaste_ode.so] 66ms 0.55% 81.90% 103ms 0.87% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 80ms 0.67% 82.58% 102ms 0.86% AbstractOneStepIvpOdeSolver::Solve 66ms 0.55% 83.13% 101ms 0.85% __libc_calloc 38ms 0.32% 83.45% 100ms 0.84% H5VM_array_calc 100ms 0.84% 84.29% 100ms 0.84% ddot_ 42ms 0.35% 84.65% 97ms 0.82% std::__cxx11::basic_string::basic_string 24ms 0.2% 84.85% 87ms 0.73% AbstractCardiacCell::SetVoltage (partial-inline) 85ms 0.71% 85.56% 85ms 0.71% __ieee754_log_fma 0 0% 85.56% 84ms 0.71% PMPI_Type_create_resized 29ms 0.24% 85.81% 84ms 0.71% ompi_datatype_set_args 82ms 0.69% 86.50% 82ms 0.69% __memcpy_avx512_unaligned_erms 82ms 0.69% 87.18% 82ms 0.69% asuint64 (inline) 0 0% 87.18% 78ms 0.66% opal_datatype_create_desc 0 0% 87.18% 73ms 0.61% PMPI_File_set_view 1ms 0.0084% 87.19% 72ms 0.61% ompi_datatype_duplicate 55ms 0.46% 87.66% 71ms 0.6% AbstractParameterisedSystem::GetAnyVariable 18ms 0.15% 87.81% 70ms 0.59% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 2ms 0.017% 87.82% 68ms 0.57% MPI_Type_contiguous 47ms 0.4% 88.22% 67ms 0.56% TimeStepper::AdvanceOneTimeStep 0 0% 88.22% 65ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 88.22% 65ms 0.55% std::vector::assign (inline) 1ms 0.0084% 88.23% 64ms 0.54% Hdf5DataWriter::PutUnlimitedVariable 21ms 0.18% 88.40% 61ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 88.40% 61ms 0.51% VecTDot 5ms 0.042% 88.45% 61ms 0.51% opal_dss_print_buffer_contents 2ms 0.017% 88.46% 60ms 0.5% MPI_Type_create_hindexed