File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 380ms, 85.59% of 444ms total Dropped 195 nodes (cum <= 2.22ms) flat flat% sum% cum cum% 0 0% 0% 438ms 98.65% __libc_start_call_main 0 0% 0% 438ms 98.65% __libc_start_main_impl 0 0% 0% 438ms 98.65% _start 0 0% 0% 435ms 97.97% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 435ms 97.97% CxxTest::TestRunner::runAllTests 0 0% 0% 435ms 97.97% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 435ms 97.97% main 0 0% 0% 397ms 89.41% CxxTest::RealTestDescription::run 0 0% 0% 397ms 89.41% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 397ms 89.41% CxxTest::TestRunner::runTest (inline) 0 0% 0% 397ms 89.41% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 397ms 89.41% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 393ms 88.51% AbstractCardiacProblem::Solve 1ms 0.23% 0.23% 393ms 88.51% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.23% 356ms 80.18% LinearSystem::Solve 1ms 0.23% 0.45% 353ms 79.50% KSPSolve 0 0% 0.45% 353ms 79.50% KSPSolve_CG 0 0% 0.45% 353ms 79.50% KSPSolve_Private 0 0% 0.45% 203ms 45.72% KSP_PCApply.lto_priv.7 0 0% 0.45% 197ms 44.37% PCApply 0 0% 0.45% 197ms 44.37% PCApply_BJacobi_Singleblock 0 0% 0.45% 164ms 36.94% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 155ms 34.91% MatSolve 154ms 34.68% 35.14% 155ms 34.91% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.14% 155ms 34.91% PCApply_ICC 0 0% 35.14% 77ms 17.34% MatMult 0 0% 35.14% 77ms 17.34% MatMult_SeqAIJ 76ms 17.12% 52.25% 77ms 17.34% MatMult_SeqAIJ_Inode (inline) 50ms 11.26% 63.51% 50ms 11.26% ddot_ 0 0% 63.51% 34ms 7.66% CxxTest::RealWorldDescription::setUp 0 0% 63.51% 34ms 7.66% PetscSetup::setUpWorld 0 0% 63.51% 34ms 7.66% PetscSetupUtils::CommonSetup 0 0% 63.51% 33ms 7.43% PMPI_Init_thread 0 0% 63.51% 33ms 7.43% PetscInitialize 0 0% 63.51% 33ms 7.43% PetscSetupUtils::InitialisePetsc 0 0% 63.51% 33ms 7.43% VecTDot 0 0% 63.51% 33ms 7.43% VecTDot_Seq 1ms 0.23% 63.74% 33ms 7.43% VecXDot_Seq_Private.constprop.0 0 0% 63.74% 33ms 7.43% ompi_mpi_init 0 0% 63.74% 30ms 6.76% AbstractCardiacTissue::SolveCellSystems 0 0% 63.74% 24ms 5.41% 0 0% 63.74% 24ms 5.41% MatNullSpaceRemove 0 0% 63.74% 24ms 5.41% orte_init 1ms 0.23% 63.96% 22ms 4.95% VecNorm 0 0% 63.96% 20ms 4.50% VecNorm_Seq 0 0% 63.96% 16ms 3.60% AbstractCardiacCell::ComputeExceptVoltage 0 0% 63.96% 15ms 3.38% hwloc_topology_load 1ms 0.23% 64.19% 14ms 3.15% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.23% 64.41% 14ms 3.15% hwloc_linux_get_tid_last_cpu_location 0 0% 64.41% 13ms 2.93% VecMDot 13ms 2.93% 67.34% 13ms 2.93% VecMDot_Seq 0 0% 67.34% 13ms 2.93% VecMXDot_Private 0 0% 67.34% 13ms 2.93% mca_base_framework_open 4ms 0.9% 68.24% 12ms 2.70% __GI___exp 0 0% 68.24% 12ms 2.70% mca_base_framework_register 1ms 0.23% 68.47% 11ms 2.48% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.23% 68.69% 11ms 2.48% VecMAXPY 0 0% 68.69% 11ms 2.48% __GI__dl_catch_exception 0 0% 68.69% 11ms 2.48% _dl_catch_error 0 0% 68.69% 11ms 2.48% _dlerror_run 0 0% 68.69% 10ms 2.25% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 68.69% 10ms 2.25% KSP_PCApply (partial-inline) 1ms 0.23% 68.92% 10ms 2.25% VecAXPY 0 0% 68.92% 10ms 2.25% VecAYPX 10ms 2.25% 71.17% 10ms 2.25% VecAYPX_Seq 10ms 2.25% 73.42% 10ms 2.25% VecMAXPY_Seq 0 0% 73.42% 10ms 2.25% opal_stackframe_output 1ms 0.23% 73.65% 9ms 2.03% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.23% 73.87% 9ms 2.03% VecAXPY_Seq 3ms 0.68% 74.55% 8ms 1.80% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.55% 8ms 1.80% VecDuplicate 0 0% 74.55% 8ms 1.80% VecDuplicate_Seq 0 0% 74.55% 8ms 1.80% ___dlopen 7ms 1.58% 76.13% 8ms 1.80% __ieee754_exp_fma 0 0% 76.13% 8ms 1.80% _dl_open 8ms 1.80% 77.93% 8ms 1.80% daxpy_ 0 0% 77.93% 8ms 1.80% dlopen_doit 0 0% 77.93% 8ms 1.80% dlopen_implementation (inline) 0 0% 77.93% 7ms 1.58% VecDestroy 0 0% 77.93% 7ms 1.58% dl_open_worker 0 0% 77.93% 7ms 1.58% dl_open_worker_begin 0 0% 77.93% 7ms 1.58% mca_base_component_find 0 0% 77.93% 7ms 1.58% mca_base_component_repository_open 0 0% 77.93% 7ms 1.58% mca_base_framework_components_register 0 0% 77.93% 6ms 1.35% _dl_init 0 0% 77.93% 6ms 1.35% _dl_map_object 0 0% 77.93% 6ms 1.35% _dl_start_user 4ms 0.9% 78.83% 6ms 1.35% _int_malloc 0 0% 78.83% 6ms 1.35% call_init (inline) 0 0% 78.83% 6ms 1.35% opal_hwloc_base_get_topology 0 0% 78.83% 6ms 1.35% orte_ess_base_proc_binding 0 0% 78.83% 5ms 1.13% BidomainSolver::SetupLinearSystem 2ms 0.45% 79.28% 5ms 1.13% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 79.28% 5ms 1.13% PetscMallocA 0 0% 79.28% 5ms 1.13% PetscMallocAlign (partial-inline) 1ms 0.23% 79.50% 5ms 1.13% VecCreate 0 0% 79.50% 5ms 1.13% __GI___libc_malloc 5ms 1.13% 80.63% 5ms 1.13% __memset_avx2_unaligned_erms 0 0% 80.63% 5ms 1.13% _dl_map_object_from_fd 0 0% 80.63% 5ms 1.13% _dl_map_segments (inline) 0 0% 80.63% 4ms 0.9% AbstractCardiacProblem::Initialise 0 0% 80.63% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 80.63% 4ms 0.9% KSPConvergedDefault 0 0% 80.63% 4ms 0.9% PetscFinalize 0 0% 80.63% 4ms 0.9% PetscMemzero (inline) 0 0% 80.63% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 80.63% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 80.63% 4ms 0.9% XOpenDisplay 0 0% 80.63% 4ms 0.9% [hwloc_gl.so] 0 0% 80.63% 4ms 0.9% [libxcb.so.1.1.0] 0 0% 80.63% 4ms 0.9% _XConnectXCB 4ms 0.9% 81.53% 4ms 0.9% __memcpy_avx_unaligned_erms 4ms 0.9% 82.43% 4ms 0.9% __mmap64 0 0% 82.43% 4ms 0.9% mca_base_var_group_register 0 0% 82.43% 4ms 0.9% mca_base_var_register 0 0% 82.43% 4ms 0.9% ompi_mpi_finalize 0 0% 82.43% 4ms 0.9% xcb_connect_to_display_with_auth_info 0 0% 82.43% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 82.43% 3ms 0.68% KSPConvergedReasonViewFromOptions 0 0% 82.43% 3ms 0.68% PetscFunctionListAdd_Private 0 0% 82.43% 3ms 0.68% PetscHeaderDestroy_Private 0 0% 82.43% 3ms 0.68% PetscMemcpy (inline) 0 0% 82.43% 3ms 0.68% PetscObjectComposeFunction_Petsc 0 0% 82.43% 3ms 0.68% PetscObjectComposeFunction_Private 0 0% 82.43% 3ms 0.68% PetscOptionsGetViewer 0 0% 82.43% 3ms 0.68% VecCopy 0 0% 82.43% 3ms 0.68% VecCopy_Seq (partial-inline) 0 0% 82.43% 3ms 0.68% VecCreate_Seq 0 0% 82.43% 3ms 0.68% VecSetType 3ms 0.68% 83.11% 3ms 0.68% [libchaste_heart.so] 3ms 0.68% 83.78% 3ms 0.68% __GI___libc_read 0 0% 83.78% 3ms 0.68% __GI_exit 3ms 0.68% 84.46% 3ms 0.68% __GI_munmap 2ms 0.45% 84.91% 3ms 0.68% ___pthread_mutex_lock 0 0% 84.91% 3ms 0.68% __cxa_finalize 0 0% 84.91% 3ms 0.68% __dlclose 0 0% 84.91% 3ms 0.68% __run_exit_handlers 0 0% 84.91% 3ms 0.68% _dl_call_fini 0 0% 84.91% 3ms 0.68% _dl_close 1ms 0.23% 85.14% 3ms 0.68% _dl_close_worker (inline) 0 0% 85.14% 3ms 0.68% _dl_fini 1ms 0.23% 85.36% 3ms 0.68% _dl_runtime_resolve_xsavec 0 0% 85.36% 3ms 0.68% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.23% 85.59% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 85.59% 3ms 0.68% boost::serialization::singleton::get_instance 0 0% 85.59% 3ms 0.68% mca_base_component_repository_release 0 0% 85.59% 3ms 0.68% mca_base_framework_components_open 0 0% 85.59% 3ms 0.68% mca_topo_base_dist_graph_neighbors_count