File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 120685ms, 91.61% of 131740ms total Dropped 1141 nodes (cum <= 658.70ms) flat flat% sum% cum cum% 0 0% 0% 131722ms 100% __libc_start_call_main 0 0% 0% 131722ms 100% __libc_start_main_impl 0 0% 0% 131722ms 100% _start 0 0% 0% 131719ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 131719ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 131719ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 131719ms 100% main 0 0% 0% 131673ms 99.95% AbstractConvergenceTester::Converge 0 0% 0% 131673ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 131673ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 131673ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 131673ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 131673ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 5ms 0.0038% 0.0038% 130490ms 99.05% AbstractCardiacProblem::Solve 14ms 0.011% 0.014% 129706ms 98.46% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0023% 0.017% 71462ms 54.24% LinearSystem::Solve 2ms 0.0015% 0.018% 70960ms 53.86% KSPSolve 19ms 0.014% 0.033% 70958ms 53.86% KSPSolve_Private 22ms 0.017% 0.049% 70635ms 53.62% KSPSolve_SYMMLQ 487ms 0.37% 0.42% 48716ms 36.98% AbstractCardiacTissue::SolveCellSystems 2ms 0.0015% 0.42% 39791ms 30.20% PCApply 3ms 0.0023% 0.42% 39775ms 30.19% PCApply_BJacobi_Singleblock 998ms 0.76% 1.18% 38452ms 29.19% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 1.18% 37379ms 28.37% KSPSolve_PREONLY (partial-inline) 1ms 0.00076% 1.18% 36259ms 27.52% PCApply_ICC 10ms 0.0076% 1.19% 36258ms 27.52% MatSolve 35859ms 27.22% 28.41% 36248ms 27.51% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 7785ms 5.91% 34.32% 34199ms 25.96% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 1ms 0.00076% 34.32% 34173ms 25.94% KSP_PCApply.lto_priv.18 9ms 0.0068% 34.33% 25008ms 18.98% MatMult 310ms 0.24% 34.56% 24999ms 18.98% MatMult_SeqAIJ (partial-inline) 24483ms 18.58% 53.14% 24998ms 18.98% MatMult_SeqAIJ_Inode (inline) 2268ms 1.72% 54.87% 17052ms 12.94% CardiacNewtonSolver::Solve 1706ms 1.29% 56.16% 10620ms 8.06% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5616ms 4.26% 60.42% 10115ms 7.68% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 265ms 0.2% 60.63% 8817ms 6.69% AbstractCardiacTissue::UpdateCaches (inline) 8628ms 6.55% 67.17% 8628ms 6.55% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1165ms 0.88% 68.06% 8331ms 6.32% BidomainSolver::SetupLinearSystem 1579ms 1.20% 69.26% 8169ms 6.20% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 0 0% 69.26% 7506ms 5.70% KSP_PCApply (partial-inline) 8ms 0.0061% 69.26% 7051ms 5.35% KSPConvergedDefault 4217ms 3.20% 72.46% 4304ms 3.27% __ieee754_log_fma 0 0% 72.46% 4194ms 3.18% boost::numeric::ublas::norm_inf (inline) 2916ms 2.21% 74.68% 4194ms 3.18% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.68% 4194ms 3.18% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.68% 4194ms 3.18% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3582ms 2.72% 77.40% 3582ms 2.72% ddot_ 8ms 0.0061% 77.40% 3256ms 2.47% MatNullSpaceRemove 1970ms 1.50% 78.90% 3065ms 2.33% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 36ms 0.027% 78.93% 3057ms 2.32% std::pow (inline) 369ms 0.28% 79.21% 3010ms 2.28% __pow 2ms 0.0015% 79.21% 2979ms 2.26% VecDot 0 0% 79.21% 2977ms 2.26% VecDot_Seq 1ms 0.00076% 79.21% 2977ms 2.26% VecXDot_Seq_Private.constprop.0 2840ms 2.16% 81.36% 2840ms 2.16% __memcpy_avx_unaligned_erms 0 0% 81.36% 2794ms 2.12% PetscMemcpy (inline) 353ms 0.27% 81.63% 2611ms 1.98% __ieee754_pow_fma 17ms 0.013% 81.64% 2432ms 1.85% VecCopy 3ms 0.0023% 81.65% 2412ms 1.83% VecCopy_Seq (partial-inline) 16ms 0.012% 81.66% 2386ms 1.81% VecAXPY 2ms 0.0015% 81.66% 2370ms 1.80% VecAXPY_Seq 2350ms 1.78% 83.44% 2350ms 1.78% daxpy_ 5ms 0.0038% 83.45% 2121ms 1.61% VecMDot 8ms 0.0061% 83.45% 2116ms 1.61% VecMXDot_Private 2092ms 1.59% 85.04% 2102ms 1.60% VecMDot_Seq 1ms 0.00076% 85.04% 2033ms 1.54% AbstractFeVolumeIntegralAssembler::DoAssemble 29ms 0.022% 85.07% 1718ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1541ms 1.17% 86.24% 1597ms 1.21% exp_inline (inline) 0 0% 86.24% 1397ms 1.06% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.24% 1267ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.24% 1267ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.24% 1267ms 0.96% boost_numeric_ublas_abs (inline) 1267ms 0.96% 87.20% 1267ms 0.96% std::abs (inline) 10ms 0.0076% 87.20% 1127ms 0.86% VecMAXPY 1108ms 0.84% 88.05% 1117ms 0.85% VecMAXPY_Seq 5ms 0.0038% 88.05% 1086ms 0.82% boost::numeric::ublas::matrix_assign (inline) 246ms 0.19% 88.24% 1073ms 0.81% boost::numeric::ublas::indexing_matrix_assign 692ms 0.53% 88.76% 1064ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1039ms 0.79% 89.55% 1039ms 0.79% [libchaste_heart.so] 0 0% 89.55% 1021ms 0.78% CuboidMeshConstructor::Construct 0 0% 89.55% 1020ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0015% 89.55% 1020ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 1ms 0.00076% 89.55% 919ms 0.7% AbstractTetrahedralElement::CalculateJacobian 5ms 0.0038% 89.56% 911ms 0.69% Element::Element 8ms 0.0061% 89.56% 871ms 0.66% BidomainAssembler::ComputeMatrixTerm 3ms 0.0023% 89.56% 862ms 0.65% VecNorm 0 0% 89.56% 855ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00076% 89.57% 852ms 0.65% VecNorm_Seq 840ms 0.64% 90.20% 840ms 0.64% __memset_avx2_unaligned_erms 5ms 0.0038% 90.21% 839ms 0.64% VecScale 1ms 0.00076% 90.21% 834ms 0.63% VecScale_Seq 831ms 0.63% 90.84% 831ms 0.63% dscal_ 9ms 0.0068% 90.84% 830ms 0.63% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 90.84% 823ms 0.62% PetscMemzero (inline) 1ms 0.00076% 90.85% 801ms 0.61% AbstractBidomainSolver::FinaliseLinearSystem 268ms 0.2% 91.05% 799ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 4ms 0.003% 91.05% 774ms 0.59% VecDuplicate 733ms 0.56% 91.61% 733ms 0.56% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 91.61% 702ms 0.53% BidomainProblem::WriteOneStep