File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 387ms, 87.36% of 443ms total Dropped 169 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 435ms 98.19% __libc_start_call_main 0 0% 0% 435ms 98.19% __libc_start_main_impl 0 0% 0% 435ms 98.19% _start 0 0% 0% 432ms 97.52% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 432ms 97.52% CxxTest::TestRunner::runAllTests 0 0% 0% 432ms 97.52% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 432ms 97.52% main 0 0% 0% 396ms 89.39% CxxTest::RealTestDescription::run 0 0% 0% 396ms 89.39% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 396ms 89.39% CxxTest::TestRunner::runTest (inline) 0 0% 0% 396ms 89.39% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 396ms 89.39% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 392ms 88.49% AbstractCardiacProblem::Solve 0 0% 0% 391ms 88.26% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 348ms 78.56% KSPSolve 1ms 0.23% 0.23% 348ms 78.56% KSPSolve_Private 0 0% 0.23% 348ms 78.56% LinearSystem::Solve 0 0% 0.23% 346ms 78.10% KSPSolve_CG 0 0% 0.23% 219ms 49.44% KSP_PCApply.lto_priv.7 1ms 0.23% 0.45% 211ms 47.63% PCApply 0 0% 0.45% 210ms 47.40% PCApply_BJacobi_Singleblock 0 0% 0.45% 180ms 40.63% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 166ms 37.47% MatSolve 163ms 36.79% 37.25% 166ms 37.47% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 37.25% 166ms 37.47% PCApply_ICC 0 0% 37.25% 56ms 12.64% MatMult 0 0% 37.25% 56ms 12.64% MatMult_SeqAIJ 56ms 12.64% 49.89% 56ms 12.64% MatMult_SeqAIJ_Inode (inline) 51ms 11.51% 61.40% 51ms 11.51% ddot_ 1ms 0.23% 61.63% 37ms 8.35% AbstractCardiacTissue::SolveCellSystems 1ms 0.23% 61.85% 35ms 7.90% MatNullSpaceRemove 0 0% 61.85% 32ms 7.22% CxxTest::RealWorldDescription::setUp 0 0% 61.85% 32ms 7.22% PMPI_Init_thread 0 0% 61.85% 32ms 7.22% PetscInitialize 0 0% 61.85% 32ms 7.22% PetscSetup::setUpWorld 0 0% 61.85% 32ms 7.22% PetscSetupUtils::CommonSetup 0 0% 61.85% 32ms 7.22% PetscSetupUtils::InitialisePetsc 0 0% 61.85% 32ms 7.22% VecTDot 0 0% 61.85% 32ms 7.22% VecTDot_Seq 0 0% 61.85% 32ms 7.22% VecXDot_Seq_Private.constprop.0 0 0% 61.85% 32ms 7.22% ompi_mpi_init 0 0% 61.85% 30ms 6.77% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.23% 62.08% 29ms 6.55% 1ms 0.23% 62.30% 25ms 5.64% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 62.30% 23ms 5.19% orte_init 0 0% 62.30% 21ms 4.74% EulerIvpOdeSolver::CalculateNextYValue 5ms 1.13% 63.43% 20ms 4.51% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 63.43% 19ms 4.29% VecMAXPY 18ms 4.06% 67.49% 19ms 4.29% VecMAXPY_Seq 0 0% 67.49% 19ms 4.29% VecNorm 0 0% 67.49% 19ms 4.29% VecNorm_Seq 11ms 2.48% 69.98% 18ms 4.06% __GI___exp 0 0% 69.98% 16ms 3.61% KSP_PCApply (partial-inline) 0 0% 69.98% 15ms 3.39% VecMDot 15ms 3.39% 73.36% 15ms 3.39% VecMDot_Seq 0 0% 73.36% 15ms 3.39% VecMXDot_Private 0 0% 73.36% 14ms 3.16% hwloc_topology_load 1ms 0.23% 73.59% 12ms 2.71% hwloc_linux_get_tid_last_cpu_location 0 0% 73.59% 11ms 2.48% mca_base_framework_open 0 0% 73.59% 10ms 2.26% mca_base_framework_components_register 0 0% 73.59% 10ms 2.26% mca_base_framework_register 1ms 0.23% 73.81% 9ms 2.03% VecAYPX 0 0% 73.81% 8ms 1.81% VecAXPY 0 0% 73.81% 8ms 1.81% VecAXPY_Seq 8ms 1.81% 75.62% 8ms 1.81% VecAYPX_Seq 0 0% 75.62% 8ms 1.81% __GI__dl_catch_exception 0 0% 75.62% 8ms 1.81% _dl_catch_error 0 0% 75.62% 8ms 1.81% _dlerror_run 0 0% 75.62% 7ms 1.58% VecDuplicate 0 0% 75.62% 7ms 1.58% VecDuplicate_Seq 0 0% 75.62% 7ms 1.58% ___dlopen 7ms 1.58% 77.20% 7ms 1.58% __ieee754_exp_fma 0 0% 77.20% 7ms 1.58% _dl_init 2ms 0.45% 77.65% 7ms 1.58% _dl_lookup_symbol_x 0 0% 77.65% 7ms 1.58% _dl_open 0 0% 77.65% 7ms 1.58% _dl_start_user 0 0% 77.65% 7ms 1.58% call_init (inline) 7ms 1.58% 79.23% 7ms 1.58% daxpy_ 0 0% 79.23% 7ms 1.58% dl_open_worker 0 0% 79.23% 7ms 1.58% dl_open_worker_begin 0 0% 79.23% 7ms 1.58% dlopen_doit 0 0% 79.23% 7ms 1.58% dlopen_implementation (inline) 0 0% 79.23% 6ms 1.35% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.23% 79.46% 6ms 1.35% CellLuoRudy1991FromCellML::GetIIonic 0 0% 79.46% 6ms 1.35% PetscMemcpy (inline) 2ms 0.45% 79.91% 6ms 1.35% __GI___libc_malloc 6ms 1.35% 81.26% 6ms 1.35% __memcpy_avx_unaligned_erms 0 0% 81.26% 6ms 1.35% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 81.26% 6ms 1.35% boost::serialization::singleton::get_instance 0 0% 81.26% 6ms 1.35% opal_stackframe_output 0 0% 81.26% 5ms 1.13% PetscMemzero (inline) 1ms 0.23% 81.49% 5ms 1.13% VecSetType 5ms 1.13% 82.62% 5ms 1.13% __memset_avx2_unaligned_erms 0 0% 82.62% 5ms 1.13% mca_base_component_find 0 0% 82.62% 5ms 1.13% mca_base_component_repository_open 0 0% 82.62% 5ms 1.13% mca_base_var_group_register 0 0% 82.62% 5ms 1.13% mca_base_var_register 0 0% 82.62% 5ms 1.13% opal_hwloc_base_get_topology 0 0% 82.62% 5ms 1.13% orte_ess_base_proc_binding 0 0% 82.62% 4ms 0.9% AbstractCardiacProblem::Initialise 0 0% 82.62% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 82.62% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 82.62% 4ms 0.9% PetscFinalize 0 0% 82.62% 4ms 0.9% PetscMallocA 0 0% 82.62% 4ms 0.9% PetscMallocAlign (partial-inline) 0 0% 82.62% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 82.62% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 82.62% 4ms 0.9% VecCopy 0 0% 82.62% 4ms 0.9% VecSet 0 0% 82.62% 4ms 0.9% VecSet_Seq (partial-inline) 0 0% 82.62% 4ms 0.9% _dl_open_relocate_one_object (inline) 0 0% 82.62% 4ms 0.9% _dl_relocate_object 4ms 0.9% 83.52% 4ms 0.9% _int_malloc 0 0% 83.52% 4ms 0.9% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.52% 4ms 0.9% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.9% 84.42% 4ms 0.9% do_lookup_x 0 0% 84.42% 4ms 0.9% elf_dynamic_do_Rela (inline) 0 0% 84.42% 4ms 0.9% elf_machine_rela (inline) 0 0% 84.42% 4ms 0.9% mca_base_component_var_register 0 0% 84.42% 4ms 0.9% ompi_mpi_finalize 0 0% 84.42% 4ms 0.9% resolve_map (inline) 0 0% 84.42% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.42% 3ms 0.68% KSPConvergedDefault 0 0% 84.42% 3ms 0.68% PetscHeaderDestroy_Private 0 0% 84.42% 3ms 0.68% VecCopy_Seq (partial-inline) 0 0% 84.42% 3ms 0.68% VecDestroy 0 0% 84.42% 3ms 0.68% XOpenDisplay 0 0% 84.42% 3ms 0.68% [hwloc_gl.so] 0 0% 84.42% 3ms 0.68% _XConnectXCB 3ms 0.68% 85.10% 3ms 0.68% __GI___close 0 0% 85.10% 3ms 0.68% __GI___libc_free 3ms 0.68% 85.78% 3ms 0.68% __GI___libc_read 0 0% 85.78% 3ms 0.68% __GI_exit 0 0% 85.78% 3ms 0.68% __cxa_finalize 0 0% 85.78% 3ms 0.68% __posix_memalign 0 0% 85.78% 3ms 0.68% __run_exit_handlers 3ms 0.68% 86.46% 3ms 0.68% __strcmp_avx2 0 0% 86.46% 3ms 0.68% _dl_call_fini 0 0% 86.46% 3ms 0.68% _dl_fini 0 0% 86.46% 3ms 0.68% _dl_fixup 0 0% 86.46% 3ms 0.68% _dl_map_object 0 0% 86.46% 3ms 0.68% _dl_runtime_resolve_xsavec 3ms 0.68% 87.13% 3ms 0.68% _int_free 1ms 0.23% 87.36% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.36% 3ms 0.68% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 87.36% 3ms 0.68% xcb_connect_to_display_with_auth_info